| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
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The map label for this gene is secA [H]
Identifier: 194737221
GI number: 194737221
Start: 158583
End: 161288
Strand: Direct
Name: secA [H]
Synonym: SeSA_A0152
Alternate gene names: 194737221
Gene position: 158583-161288 (Clockwise)
Preceding gene: 194737789
Following gene: 194734637
Centisome position: 3.37
GC content: 53.95
Gene sequence:
>2706_bases ATGCTAATCAAATTATTAACCAAAGTATTCGGTAGCCGTAACGATCGTACGCTGCGTCGTATGCGTAAGGCCGTCAGCCT TATTAATGCGATGGAACCGGAGATGGAAAAACTCTCCGATGACGAACTGAAAGCGAAAACCAACGAATTTCGCGCCCGTA TTGAAAAAGGCGAAAGCGTAGAGAGCCTGATTCCGGAAGCGTTCGCGGTGGTGCGTGAAGCCAGTAAACGCGTCTTTGGG ATGCGTCACTTCGACGTTCAGCTATTGGGTGGTATGGTGCTCAACGATCGCTGTATCGCCGAAATGCGTACTGGTGAAGG TAAAACGCTGACCGCAACGCTGCCAGCCTACCTGAACGCGCTGTCCGGCAAAGGCGTTCATGTGGTAACCGTGAACGACT ATCTGGCGCAGCGTGACGCCGAAAACAACCGTCCGCTATTCGAATTCCTCGGCATGTCCGTTGGTATCAACCTGCCAGGT ATGCCTGCGCCAGCCAAACGTGAAGCTTACGCTGCCGACATCACTTACGGCACTAACAACGAATACGGTTTTGACTACCT GCGCGACAACATGGCGTTCAGCCCGGAAGAGCGCGTGCAGCGTAAACTGCATTATGCGCTGGTGGATGAGGTCGACTCCA TCCTGATCGATGAAGCGCGTACGCCGCTGATTATTTCCGGCCCGGCGGAAGATAGCTCGGAAATGTACAAAAAAGTGAAC AAAATCATTCCGCACCTGATTCGTCAGGAGAAAGAAGATTCTGACACTTTCCAGGGCGAAGGCCACTTCTCCGTTGATGA GAAAGCGCGCCAGGTTAACCTGACCGAACGCGGTCTGGTGTTGATCGAAGAGCTACTGGTGCAAGAAGGCATTATGGATG AAGGCGAGTCGCTCTACTCGCCTGGCAATATTATGCTGATGCATCACGTCACCGCCGCGCTGCGCGCGCACGCGCTGTTT ACCCGTGACGTGGATTACATTGTGAAAGACGGTGAAGTCATCATTGTTGATGAACATACCGGTCGTACCATGCAGGGGCG TCGCTGGTCTGACGGTCTGCACCAGGCGGTAGAAGCGAAAGAAGGCGTTGAAATTCAGAATGAAAACCAGACGCTGGCGT CTATCACCTTCCAGAACTACTTCCGTCTGTATGAAAAGCTGGCCGGTATGACCGGTACGGCGGATACTGAAGCCTTCGAA TTTAGCTCTATCTATAAGCTGGACACCGTCGTTGTTCCGACCAACCGTCCGATGATCCGTAAAGATTTGCCGGATCTGGT CTACATGACCGAAGCGGAAAAAATCCAGGCCATTATCGAAGATATTAAAGAGCGTACCGCGAACGGTCAGCCAGTGCTGG TCGGGACGATTTCTATCGAGAAATCTGAAGTGGTCTCCAGAGAGCTGACCAAAGCGGGCATCAAACATAACGTACTGAAC GCAAAATTCCACGCCAACGAAGCAGGCATCGTTGCGCAGGCTGGTTATCCAGCGGCGGTCACTATCGCTACCAACATGGC GGGTCGTGGTACCGATATTATGCTGGGCGGTAGCTGGCAGGCGGAAGTCGCCGCGCTGGAAGCGCCGACGGAAGAACAGA TTGCGCAGATTAAAGCGGACTGGCAGGTACGCCATGACGCGGTTCTGGCTGCCGGCGGTCTGCATATCATTGGCACCGAG CGCCATGAATCCCGCCGTATCGACAACCAGCTGCGTGGCCGTTCCGGTCGCCAGGGCGATCCGGGTTCTTCCCGTTTCTA CCTGTCGATGGAAGATGCGCTGATGCGTATTTTCGCCTCCGATCGTGTCTCCGGTATGATGCGTAAACTGGGGATGAAGC CGGGCGAAGCGATTGAGCACCCGTGGGTGACGAAAGCTATCGCTAACGCGCAGCGTAAAGTAGAAAGCCGTAACTTCGAT ATTCGTAAGCAACTGCTGGAATATGATGATGTGGCGAACGATCAGCGCCGTGCAATTTATACCCAGCGTAACGAACTGCT GGATGTGTCTGACGTGAGCGACACCATTAACAGCATTCGCGAAGATGTCTTTAAGGCGACTATCGACGCCTATATTCCGC CGCAGTCGCTGGAAGAGATGTGGGACATCCCGGGTTTGCAGGAACGCCTGAAAAACGACTTCGACCTGGAGCTGCCGATT GCCGAATGGCTGGATAAAGAGCCGGAGCTGCATGAGGAGACGCTGCGTGAGCGCATCCTGGCGCAGTCTATCGAAGTGTA TCAGCGTAAAGAAGAGGTGGTTGGCGCTGAAATGATGCGTCATTTCGAAAAAGGCGTGATGCTGCAAACGCTCGATTCCC TGTGGAAAGAGCACCTGGCGGCGATGGATTACCTGCGTCAGGGTATTCATCTGCGCGGCTATGCGCAAAAAGATCCGAAG CAGGAATACAAGCGCGAATCCTTCGCTATGTTCGCCGCGATGCTGGAATCGCTGAAATATGAAGTGATCAGCACCCTGAG CAAAGTCCAGGTACGTATGCCGGAAGAGGTCGAAGCGATGGAAATGCAGCGTCGCGAAGAGGCGGAGCGCCTGGCGCAGA TGCAGCAGCTAAGCCATCAGGATGACGATACCGCTGTGGCTGCCGATCTGGCCGCCCAAACAGGCGAACGTAAGATTGGA CGTAACGATCCTTGCCCTTGCGGTTCCGGTAAGAAATACAAACAGTGTCACGGTCGCCTGAGCTAA
Upstream 100 bases:
>100_bases GCGCAGGGTATCCGCGCCGGTCCGCAACGTCTCAGCTAACGAAAAAAGACCCTTTTACTTTATTTGTAGCTCCGCGGCGC GGGGCATTTGAGACTTTATT
Downstream 100 bases:
>100_bases TGCGATAAACTTACCGGCCTGATAAGACATAATGTGTTGCCATCAGGTCGGTGCTGGCATTATTGCCGAAGGGCGCTACG CTTATTCGGCCTGGCATTGA
Product: preprotein translocase subunit SecA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 901; Mature: 901
Protein sequence:
>901_residues MLIKLLTKVFGSRNDRTLRRMRKAVSLINAMEPEMEKLSDDELKAKTNEFRARIEKGESVESLIPEAFAVVREASKRVFG MRHFDVQLLGGMVLNDRCIAEMRTGEGKTLTATLPAYLNALSGKGVHVVTVNDYLAQRDAENNRPLFEFLGMSVGINLPG MPAPAKREAYAADITYGTNNEYGFDYLRDNMAFSPEERVQRKLHYALVDEVDSILIDEARTPLIISGPAEDSSEMYKKVN KIIPHLIRQEKEDSDTFQGEGHFSVDEKARQVNLTERGLVLIEELLVQEGIMDEGESLYSPGNIMLMHHVTAALRAHALF TRDVDYIVKDGEVIIVDEHTGRTMQGRRWSDGLHQAVEAKEGVEIQNENQTLASITFQNYFRLYEKLAGMTGTADTEAFE FSSIYKLDTVVVPTNRPMIRKDLPDLVYMTEAEKIQAIIEDIKERTANGQPVLVGTISIEKSEVVSRELTKAGIKHNVLN AKFHANEAGIVAQAGYPAAVTIATNMAGRGTDIMLGGSWQAEVAALEAPTEEQIAQIKADWQVRHDAVLAAGGLHIIGTE RHESRRIDNQLRGRSGRQGDPGSSRFYLSMEDALMRIFASDRVSGMMRKLGMKPGEAIEHPWVTKAIANAQRKVESRNFD IRKQLLEYDDVANDQRRAIYTQRNELLDVSDVSDTINSIREDVFKATIDAYIPPQSLEEMWDIPGLQERLKNDFDLELPI AEWLDKEPELHEETLRERILAQSIEVYQRKEEVVGAEMMRHFEKGVMLQTLDSLWKEHLAAMDYLRQGIHLRGYAQKDPK QEYKRESFAMFAAMLESLKYEVISTLSKVQVRMPEEVEAMEMQRREEAERLAQMQQLSHQDDDTAVAADLAAQTGERKIG RNDPCPCGSGKKYKQCHGRLS
Sequences:
>Translated_901_residues MLIKLLTKVFGSRNDRTLRRMRKAVSLINAMEPEMEKLSDDELKAKTNEFRARIEKGESVESLIPEAFAVVREASKRVFG MRHFDVQLLGGMVLNDRCIAEMRTGEGKTLTATLPAYLNALSGKGVHVVTVNDYLAQRDAENNRPLFEFLGMSVGINLPG MPAPAKREAYAADITYGTNNEYGFDYLRDNMAFSPEERVQRKLHYALVDEVDSILIDEARTPLIISGPAEDSSEMYKKVN KIIPHLIRQEKEDSDTFQGEGHFSVDEKARQVNLTERGLVLIEELLVQEGIMDEGESLYSPGNIMLMHHVTAALRAHALF TRDVDYIVKDGEVIIVDEHTGRTMQGRRWSDGLHQAVEAKEGVEIQNENQTLASITFQNYFRLYEKLAGMTGTADTEAFE FSSIYKLDTVVVPTNRPMIRKDLPDLVYMTEAEKIQAIIEDIKERTANGQPVLVGTISIEKSEVVSRELTKAGIKHNVLN AKFHANEAGIVAQAGYPAAVTIATNMAGRGTDIMLGGSWQAEVAALEAPTEEQIAQIKADWQVRHDAVLAAGGLHIIGTE RHESRRIDNQLRGRSGRQGDPGSSRFYLSMEDALMRIFASDRVSGMMRKLGMKPGEAIEHPWVTKAIANAQRKVESRNFD IRKQLLEYDDVANDQRRAIYTQRNELLDVSDVSDTINSIREDVFKATIDAYIPPQSLEEMWDIPGLQERLKNDFDLELPI AEWLDKEPELHEETLRERILAQSIEVYQRKEEVVGAEMMRHFEKGVMLQTLDSLWKEHLAAMDYLRQGIHLRGYAQKDPK QEYKRESFAMFAAMLESLKYEVISTLSKVQVRMPEEVEAMEMQRREEAERLAQMQQLSHQDDDTAVAADLAAQTGERKIG RNDPCPCGSGKKYKQCHGRLS >Mature_901_residues MLIKLLTKVFGSRNDRTLRRMRKAVSLINAMEPEMEKLSDDELKAKTNEFRARIEKGESVESLIPEAFAVVREASKRVFG MRHFDVQLLGGMVLNDRCIAEMRTGEGKTLTATLPAYLNALSGKGVHVVTVNDYLAQRDAENNRPLFEFLGMSVGINLPG MPAPAKREAYAADITYGTNNEYGFDYLRDNMAFSPEERVQRKLHYALVDEVDSILIDEARTPLIISGPAEDSSEMYKKVN KIIPHLIRQEKEDSDTFQGEGHFSVDEKARQVNLTERGLVLIEELLVQEGIMDEGESLYSPGNIMLMHHVTAALRAHALF TRDVDYIVKDGEVIIVDEHTGRTMQGRRWSDGLHQAVEAKEGVEIQNENQTLASITFQNYFRLYEKLAGMTGTADTEAFE FSSIYKLDTVVVPTNRPMIRKDLPDLVYMTEAEKIQAIIEDIKERTANGQPVLVGTISIEKSEVVSRELTKAGIKHNVLN AKFHANEAGIVAQAGYPAAVTIATNMAGRGTDIMLGGSWQAEVAALEAPTEEQIAQIKADWQVRHDAVLAAGGLHIIGTE RHESRRIDNQLRGRSGRQGDPGSSRFYLSMEDALMRIFASDRVSGMMRKLGMKPGEAIEHPWVTKAIANAQRKVESRNFD IRKQLLEYDDVANDQRRAIYTQRNELLDVSDVSDTINSIREDVFKATIDAYIPPQSLEEMWDIPGLQERLKNDFDLELPI AEWLDKEPELHEETLRERILAQSIEVYQRKEEVVGAEMMRHFEKGVMLQTLDSLWKEHLAAMDYLRQGIHLRGYAQKDPK QEYKRESFAMFAAMLESLKYEVISTLSKVQVRMPEEVEAMEMQRREEAERLAQMQQLSHQDDDTAVAADLAAQTGERKIG RNDPCPCGSGKKYKQCHGRLS
Specific function: Part of the Sec protein translocase complex. Interacts with the secYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the pr
COG id: COG0653
COG function: function code U; Preprotein translocase subunit SecA (ATPase, RNA helicase)
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side. Cytoplasm (By similarity). Note=Distribution is 50-50 (By similarity) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the secA family [H]
Homologues:
Organism=Escherichia coli, GI1786287, Length=900, Percent_Identity=95.2222222222222, Blast_Score=1774, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004027 - InterPro: IPR000185 - InterPro: IPR020937 - InterPro: IPR011115 - InterPro: IPR014018 - InterPro: IPR011130 - InterPro: IPR011116 [H]
Pfam domain/function: PF02810 SEC-C; PF07517 SecA_DEAD; PF01043 SecA_PP_bind; PF07516 SecA_SW [H]
EC number: NA
Molecular weight: Translated: 101839; Mature: 101839
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: PS01312 SECA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIKLLTKVFGSRNDRTLRRMRKAVSLINAMEPEMEKLSDDELKAKTNEFRARIEKGESV CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHCCCCH ESLIPEAFAVVREASKRVFGMRHFDVQLLGGMVLNDRCIAEMRTGEGKTLTATLPAYLNA HHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHCCCCCEEEEEHHHHHHH LSGKGVHVVTVNDYLAQRDAENNRPLFEFLGMSVGINLPGMPAPAKREAYAADITYGTNN HCCCCEEEEEECHHHHHCCCCCCCCHHHHHCCHHCCCCCCCCCCCCCCCEEEEEEECCCC EYGFDYLRDNMAFSPEERVQRKLHYALVDEVDSILIDEARTPLIISGPAEDSSEMYKKVN CCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHH KIIPHLIRQEKEDSDTFQGEGHFSVDEKARQVNLTERGLVLIEELLVQEGIMDEGESLYS HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHCC PGNIMLMHHVTAALRAHALFTRDVDYIVKDGEVIIVDEHTGRTMQGRRWSDGLHQAVEAK CCCEEEHHHHHHHHHHHHHHHCCHHHEEECCCEEEEECCCCCCCCCCCCHHHHHHHHHHH EGVEIQNENQTLASITFQNYFRLYEKLAGMTGTADTEAFEFSSIYKLDTVVVPTNRPMIR CCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHEEEEEEEEECCCCCHHH KDLPDLVYMTEAEKIQAIIEDIKERTANGQPVLVGTISIEKSEVVSRELTKAGIKHNVLN HCCCHHEEHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHCCCC AKFHANEAGIVAQAGYPAAVTIATNMAGRGTDIMLGGSWQAEVAALEAPTEEQIAQIKAD CEEECCCCCEEEECCCCEEEEEEECCCCCCCEEEECCCCCHHHHEECCCCHHHHHHHHHH WQVRHDAVLAAGGLHIIGTERHESRRIDNQLRGRSGRQGDPGSSRFYLSMEDALMRIFAS HHHHHHHEEEECCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHH DRVSGMMRKLGMKPGEAIEHPWVTKAIANAQRKVESRNFDIRKQLLEYDDVANDQRRAIY HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHH TQRNELLDVSDVSDTINSIREDVFKATIDAYIPPQSLEEMWDIPGLQERLKNDFDLELPI HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHCCCCCCCEECH AEWLDKEPELHEETLRERILAQSIEVYQRKEEVVGAEMMRHFEKGVMLQTLDSLWKEHLA HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH AMDYLRQGIHLRGYAQKDPKQEYKRESFAMFAAMLESLKYEVISTLSKVQVRMPEEVEAM HHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH EMQRREEAERLAQMQQLSHQDDDTAVAADLAAQTGERKIGRNDPCPCGSGKKYKQCHGRL HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCC S C >Mature Secondary Structure MLIKLLTKVFGSRNDRTLRRMRKAVSLINAMEPEMEKLSDDELKAKTNEFRARIEKGESV CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHCCCCH ESLIPEAFAVVREASKRVFGMRHFDVQLLGGMVLNDRCIAEMRTGEGKTLTATLPAYLNA HHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHCCCCCEEEEEHHHHHHH LSGKGVHVVTVNDYLAQRDAENNRPLFEFLGMSVGINLPGMPAPAKREAYAADITYGTNN HCCCCEEEEEECHHHHHCCCCCCCCHHHHHCCHHCCCCCCCCCCCCCCCEEEEEEECCCC EYGFDYLRDNMAFSPEERVQRKLHYALVDEVDSILIDEARTPLIISGPAEDSSEMYKKVN CCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHH KIIPHLIRQEKEDSDTFQGEGHFSVDEKARQVNLTERGLVLIEELLVQEGIMDEGESLYS HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHCC PGNIMLMHHVTAALRAHALFTRDVDYIVKDGEVIIVDEHTGRTMQGRRWSDGLHQAVEAK CCCEEEHHHHHHHHHHHHHHHCCHHHEEECCCEEEEECCCCCCCCCCCCHHHHHHHHHHH EGVEIQNENQTLASITFQNYFRLYEKLAGMTGTADTEAFEFSSIYKLDTVVVPTNRPMIR CCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHEEEEEEEEECCCCCHHH KDLPDLVYMTEAEKIQAIIEDIKERTANGQPVLVGTISIEKSEVVSRELTKAGIKHNVLN HCCCHHEEHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHCCCC AKFHANEAGIVAQAGYPAAVTIATNMAGRGTDIMLGGSWQAEVAALEAPTEEQIAQIKAD CEEECCCCCEEEECCCCEEEEEEECCCCCCCEEEECCCCCHHHHEECCCCHHHHHHHHHH WQVRHDAVLAAGGLHIIGTERHESRRIDNQLRGRSGRQGDPGSSRFYLSMEDALMRIFAS HHHHHHHEEEECCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHH DRVSGMMRKLGMKPGEAIEHPWVTKAIANAQRKVESRNFDIRKQLLEYDDVANDQRRAIY HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHH TQRNELLDVSDVSDTINSIREDVFKATIDAYIPPQSLEEMWDIPGLQERLKNDFDLELPI HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHCCCCCCCEECH AEWLDKEPELHEETLRERILAQSIEVYQRKEEVVGAEMMRHFEKGVMLQTLDSLWKEHLA HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH AMDYLRQGIHLRGYAQKDPKQEYKRESFAMFAAMLESLKYEVISTLSKVQVRMPEEVEAM HHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH EMQRREEAERLAQMQQLSHQDDDTAVAADLAAQTGERKIGRNDPCPCGSGKKYKQCHGRL HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCC S C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA