Click here to switch to the map view.

The map label for this gene is ybjM [H]

Identifier: 194737099

GI number: 194737099

Start: 997870

End: 998172

Strand: Direct

Name: ybjM [H]

Synonym: SeSA_A1024

Alternate gene names: 194737099

Gene position: 997870-998172 (Clockwise)

Preceding gene: 194735741

Following gene: 194736457

Centisome position: 21.19

GC content: 53.8

Gene sequence:

>303_bases
ATGCATGTACAAGGCGCTTTTCGCGCGGCAGGGCATCCTGAGATTGGACTGTTATTTTTTACGTTGCCTGGTGCGGTGGC
CAGTTTTTGTTCTCACCGACGCGAGGTGATCCGACCGCTGATCGGGGCGATGCTGGCGGCGCCGTTTTGCCTGGTGTTAA
TGCGCGTGGTATTTATGCCTACCCGATCGTTTTGGCAAGAACTGGCGTGGTTATTTAGCGCCGTATTCTGGTGTGCGTTA
GGCGCGCTCTGCTATTTGTTTATTAGCAGCCTGTTTAGCCACCGGCGAAAAAAACGCCGATAG

Upstream 100 bases:

>100_bases
CGATAGAGAGTGTCAGGAGGAACGATTGAAACATAAACACGGGTGGGCAAGCGTTGTCTGCTGCTTTGTACTCTTTATTG
TGGTGTGTCTTTCATTAACT

Downstream 100 bases:

>100_bases
CGCCCTCCGGTAGAGGGCGTTGCCAGAGCAATCAGGCGAAAAGATTCAGATTTTCTTTTGCCCATGCTTCAAAATCCGTA
CAGCCGCCGATATGTTTTTG

Product: inner membrane protein YbjM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 100; Mature: 100

Protein sequence:

>100_residues
MHVQGAFRAAGHPEIGLLFFTLPGAVASFCSHRREVIRPLIGAMLAAPFCLVLMRVVFMPTRSFWQELAWLFSAVFWCAL
GALCYLFISSLFSHRRKKRR

Sequences:

>Translated_100_residues
MHVQGAFRAAGHPEIGLLFFTLPGAVASFCSHRREVIRPLIGAMLAAPFCLVLMRVVFMPTRSFWQELAWLFSAVFWCAL
GALCYLFISSLFSHRRKKRR
>Mature_100_residues
MHVQGAFRAAGHPEIGLLFFTLPGAVASFCSHRREVIRPLIGAMLAAPFCLVLMRVVFMPTRSFWQELAWLFSAVFWCAL
GALCYLFISSLFSHRRKKRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787072, Length=99, Percent_Identity=74.7474747474748, Blast_Score=151, Evalue=8e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020368
- ProDom:   PD079046 [H]

Pfam domain/function: PF11045 YbjM [H]

EC number: NA

Molecular weight: Translated: 11417; Mature: 11417

Theoretical pI: Translated: 11.66; Mature: 11.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHVQGAFRAAGHPEIGLLFFTLPGAVASFCSHRREVIRPLIGAMLAAPFCLVLMRVVFMP
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TRSFWQELAWLFSAVFWCALGALCYLFISSLFSHRRKKRR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MHVQGAFRAAGHPEIGLLFFTLPGAVASFCSHRREVIRPLIGAMLAAPFCLVLMRVVFMP
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TRSFWQELAWLFSAVFWCALGALCYLFISSLFSHRRKKRR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]