Click here to switch to the map view.

The map label for this gene is gatY [H]

Identifier: 194737038

GI number: 194737038

Start: 3327697

End: 3328551

Strand: Direct

Name: gatY [H]

Synonym: SeSA_A3445

Alternate gene names: 194737038

Gene position: 3327697-3328551 (Clockwise)

Preceding gene: 194736547

Following gene: 194736549

Centisome position: 70.67

GC content: 53.1

Gene sequence:

>855_bases
ATGTTTATCATTTCAGGCAGAACAATGCTAAAGAAGGCGCAGCAGGAAGGTTATGCTGTGCCGGCGTTTAACATCCACAA
CCTGGAGACATTGCAAGTGGTGGTGGAAACCGCCGCAGAATTGCGCTCTCCGCTGATTGTCGCCGGTACGCCAGGCACCT
TTAGCTACGCAGGCGTCGGTAATATCGTGGCCATCGCCGCAGAACTGGCGAAAAGCTGGAACCATCCTCTCGCGGTACAT
CTCGATCATCATGAAAAACTGGCCGACATTAAAATGAAAGTCGCCGCCGGGGTACGCTCGGTCATGATCGACGGGTCGCA
TTTCCCCTTTGCCGACAATATTGCGCTGGTGAAAAGCGTGGTTGATTACTGTCATCGCTACGATGTCAGCGTTGAAGCTG
AACTTGGGCGTCTCGGCGGGCAGGAAGACGATCTTATCGTTGACGGCAAAGATGCGCTTTATACCCATCCGGAACAGGCC
CGGGAATTTGTAGAAAAAACGGGTATCGACTCGTTAGCCATTGCTATCGGCACCGCTCATGGCCTCTACACCGCTGAACC
AAAACTTGATTTTGAACGACTGACGGAAATTCGTCAGCGGGTTGATGTCCCCTTAGTCCTTCACGGCGCCTCTGGCCTGC
CGACCCGCGATATTACCCGCGCTATTTCGCTGGGCATCTGCAAAGTTAACGTCGCGACCGAGCTAAAAATCGCCTTTTCC
GACGCGCTTAAAAACTATTTAACGCAACACGCAGAGGCCAGCGATCCCCGCCATTACATGATCCCGGCGAAAGCGGCCAT
GAAAGAGGTTGTACGTAAAGTGATTGCCGACTGCGGTTGTGAAGGGAAGCTCTAA

Upstream 100 bases:

>100_bases
TATTTCGAAACTTTCATTTATCAGATCAAAATCACAAAAAAACATTCCGAAAGCCTATAAATTCTTTCACAGAAAACAAA
CGAAAGATTTCGGAGGAAGG

Downstream 100 bases:

>100_bases
AGCCCCCGGATTTAGCACGGCAAAGGGCGTTTTCATAGCTGGATCACGAAAGCCATTATTATCCTTTGCCTTCAAACCAA
AAATATTATGAAGATAAACA

Product: tagatose-bisphosphate aldolase

Products: NA

Alternate protein names: TBPA; TagBP aldolase; D-tagatose-bisphosphate aldolase class II; Tagatose-bisphosphate aldolase [H]

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MFIISGRTMLKKAQQEGYAVPAFNIHNLETLQVVVETAAELRSPLIVAGTPGTFSYAGVGNIVAIAAELAKSWNHPLAVH
LDHHEKLADIKMKVAAGVRSVMIDGSHFPFADNIALVKSVVDYCHRYDVSVEAELGRLGGQEDDLIVDGKDALYTHPEQA
REFVEKTGIDSLAIAIGTAHGLYTAEPKLDFERLTEIRQRVDVPLVLHGASGLPTRDITRAISLGICKVNVATELKIAFS
DALKNYLTQHAEASDPRHYMIPAKAAMKEVVRKVIADCGCEGKL

Sequences:

>Translated_284_residues
MFIISGRTMLKKAQQEGYAVPAFNIHNLETLQVVVETAAELRSPLIVAGTPGTFSYAGVGNIVAIAAELAKSWNHPLAVH
LDHHEKLADIKMKVAAGVRSVMIDGSHFPFADNIALVKSVVDYCHRYDVSVEAELGRLGGQEDDLIVDGKDALYTHPEQA
REFVEKTGIDSLAIAIGTAHGLYTAEPKLDFERLTEIRQRVDVPLVLHGASGLPTRDITRAISLGICKVNVATELKIAFS
DALKNYLTQHAEASDPRHYMIPAKAAMKEVVRKVIADCGCEGKL
>Mature_284_residues
MFIISGRTMLKKAQQEGYAVPAFNIHNLETLQVVVETAAELRSPLIVAGTPGTFSYAGVGNIVAIAAELAKSWNHPLAVH
LDHHEKLADIKMKVAAGVRSVMIDGSHFPFADNIALVKSVVDYCHRYDVSVEAELGRLGGQEDDLIVDGKDALYTHPEQA
REFVEKTGIDSLAIAIGTAHGLYTAEPKLDFERLTEIRQRVDVPLVLHGASGLPTRDITRAISLGICKVNVATELKIAFS
DALKNYLTQHAEASDPRHYMIPAKAAMKEVVRKVIADCGCEGKL

Specific function: Catalytic subunit of the tagatose-1,6-bisphosphate aldolase GatYZ, which catalyzes the reversible aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to produce tagatose 1,6- bisphosphate (T

COG id: COG0191

COG function: function code G; Fructose/tagatose bisphosphate aldolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class II fructose-bisphosphate aldolase family. TagBP aldolase GatY subfamily [H]

Homologues:

Organism=Escherichia coli, GI87082041, Length=283, Percent_Identity=68.5512367491166, Blast_Score=421, Evalue=1e-119,
Organism=Escherichia coli, GI1789526, Length=284, Percent_Identity=59.5070422535211, Blast_Score=357, Evalue=1e-100,
Organism=Escherichia coli, GI1788072, Length=282, Percent_Identity=39.0070921985816, Blast_Score=175, Evalue=4e-45,
Organism=Escherichia coli, GI1789293, Length=292, Percent_Identity=26.027397260274, Blast_Score=84, Evalue=1e-17,
Organism=Saccharomyces cerevisiae, GI6322790, Length=287, Percent_Identity=27.5261324041812, Blast_Score=75, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000771
- InterPro:   IPR011288 [H]

Pfam domain/function: PF01116 F_bP_aldolase [H]

EC number: =4.1.2.40 [H]

Molecular weight: Translated: 30875; Mature: 30875

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS00806 ALDOLASE_CLASS_II_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIISGRTMLKKAQQEGYAVPAFNIHNLETLQVVVETAAELRSPLIVAGTPGTFSYAGVG
CEEECCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCH
NIVAIAAELAKSWNHPLAVHLDHHEKLADIKMKVAAGVRSVMIDGSHFPFADNIALVKSV
HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCHHHEEECCCCCCCCCHHHHHHHH
VDYCHRYDVSVEAELGRLGGQEDDLIVDGKDALYTHPEQAREFVEKTGIDSLAIAIGTAH
HHHHHHCCCCEEHHHHHCCCCCCCEEECCCHHHCCCHHHHHHHHHHCCCCCEEEEEECCC
GLYTAEPKLDFERLTEIRQRVDVPLVLHGASGLPTRDITRAISLGICKVNVATELKIAFS
CEEECCCCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCEEEEECHHHHHHHHH
DALKNYLTQHAEASDPRHYMIPAKAAMKEVVRKVIADCGCEGKL
HHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MFIISGRTMLKKAQQEGYAVPAFNIHNLETLQVVVETAAELRSPLIVAGTPGTFSYAGVG
CEEECCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCH
NIVAIAAELAKSWNHPLAVHLDHHEKLADIKMKVAAGVRSVMIDGSHFPFADNIALVKSV
HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCHHHEEECCCCCCCCCHHHHHHHH
VDYCHRYDVSVEAELGRLGGQEDDLIVDGKDALYTHPEQAREFVEKTGIDSLAIAIGTAH
HHHHHHCCCCEEHHHHHCCCCCCCEEECCCHHHCCCHHHHHHHHHHCCCCCEEEEEECCC
GLYTAEPKLDFERLTEIRQRVDVPLVLHGASGLPTRDITRAISLGICKVNVATELKIAFS
CEEECCCCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCEEEEECHHHHHHHHH
DALKNYLTQHAEASDPRHYMIPAKAAMKEVVRKVIADCGCEGKL
HHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA