Click here to switch to the map view.

The map label for this gene is hofP [H]

Identifier: 194736855

GI number: 194736855

Start: 3541373

End: 3541720

Strand: Reverse

Name: hofP [H]

Synonym: SeSA_A3686

Alternate gene names: 194736855

Gene position: 3541720-3541373 (Counterclockwise)

Preceding gene: 194736423

Following gene: 194738175

Centisome position: 75.21

GC content: 58.33

Gene sequence:

>348_bases
ATGCGCGATCCCTTCCGCCCGCCGGAAGATCGCTGCCGGATAGCGGAACTCTCGCAGTGGCGATATCAGGGCGCGGTACG
TAAAGGCGAGCGATGGACAGGCATTCTTAAAGATAGCCAGCAAAAATGGCGGCGAGTGGAAGAAGGGCAGACGCTGGAAA
ACGGTTGGACGATTGTCCGCCTGACGGCGGAAGCCTTAACGTTAACGACCGGTAAAAATTGTGCGCCGCCGCAGTGGCGG
TGGCTACGTCAGGGAGCGGGCAATGAAGCGATGGATAGCCATAATACTGATAGTCTTGATGCCCGCCGCACAGGCGGGAA
AAGCGGCGAAAGTGACGCTGGTGGTTGA

Upstream 100 bases:

>100_bases
GAGGGGGCGGAATTATTGATAACGCTGCAACTGGAGCGCCTGGCGAATGAAGGCTAGCCGTAGTGTATTGCTCTGTTTTT
GTTTGCTGACGTTGACAGGA

Downstream 100 bases:

>100_bases
CGACGTCCCTGTGGTGCAGGTTTTGCAGACTTTAGCCGAGCAGGAGCGGCAGAATCTGGTGGTGTCGCCGGACGTCAGCG
GGACATTATCGCTACATCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MRDPFRPPEDRCRIAELSQWRYQGAVRKGERWTGILKDSQQKWRRVEEGQTLENGWTIVRLTAEALTLTTGKNCAPPQWR
WLRQGAGNEAMDSHNTDSLDARRTGGKSGESDAGG

Sequences:

>Translated_115_residues
MRDPFRPPEDRCRIAELSQWRYQGAVRKGERWTGILKDSQQKWRRVEEGQTLENGWTIVRLTAEALTLTTGKNCAPPQWR
WLRQGAGNEAMDSHNTDSLDARRTGGKSGESDAGG
>Mature_115_residues
MRDPFRPPEDRCRIAELSQWRYQGAVRKGERWTGILKDSQQKWRRVEEGQTLENGWTIVRLTAEALTLTTGKNCAPPQWR
WLRQGAGNEAMDSHNTDSLDARRTGGKSGESDAGG

Specific function: Required for the use of extracellular DNA as a nutrient [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082256, Length=115, Percent_Identity=66.0869565217391, Blast_Score=161, Evalue=8e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019684 [H]

Pfam domain/function: PF10748 DUF2531 [H]

EC number: NA

Molecular weight: Translated: 13042; Mature: 13042

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDPFRPPEDRCRIAELSQWRYQGAVRKGERWTGILKDSQQKWRRVEEGQTLENGWTIVR
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEE
LTAEALTLTTGKNCAPPQWRWLRQGAGNEAMDSHNTDSLDARRTGGKSGESDAGG
EECCCEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRDPFRPPEDRCRIAELSQWRYQGAVRKGERWTGILKDSQQKWRRVEEGQTLENGWTIVR
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEE
LTAEALTLTTGKNCAPPQWRWLRQGAGNEAMDSHNTDSLDARRTGGKSGESDAGG
EECCCEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]