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The map label for this gene is rof [H]

Identifier: 194736851

GI number: 194736851

Start: 282470

End: 282664

Strand: Reverse

Name: rof [H]

Synonym: SeSA_A0264

Alternate gene names: 194736851

Gene position: 282664-282470 (Counterclockwise)

Preceding gene: 194737176

Following gene: 194734840

Centisome position: 6.0

GC content: 44.62

Gene sequence:

>195_bases
ATGCATCATTTAATACTGACGCTAACGTTAAAAGATGGCGAGGTTTTGCAGGCAAAAGCGAACGATTTGATCTTACGTAA
AAACGTAGAGTATCTGCTTGCCGAGATTTCCGGCGAGTCTTGTGAACTTCGTCTCGATAAAATCGCCAGTTTCAGCCACC
CGGAAATTGGTACCGTGGTAGTTAGCGAATCCTGA

Upstream 100 bases:

>100_bases
GCTTATGCTGCCGCGAACTTACTGGTGAGCGATTATGTCAATGAATGAAACGTATCAACCCATTAATTGCGATGACTACG
ATAGTCTTGAGCTTGCCTGC

Downstream 100 bases:

>100_bases
GTATTTTGTTGCCGGATGGCGGTGCAAGCACCTTATCCGGCCTACGTTCCATGCGATACGTAGGCCTGATAAGCGCAGCG
CCATCAGGCATGCCAAACCA

Product: rof protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 64; Mature: 64

Protein sequence:

>64_residues
MHHLILTLTLKDGEVLQAKANDLILRKNVEYLLAEISGESCELRLDKIASFSHPEIGTVVVSES

Sequences:

>Translated_64_residues
MHHLILTLTLKDGEVLQAKANDLILRKNVEYLLAEISGESCELRLDKIASFSHPEIGTVVVSES
>Mature_64_residues
MHHLILTLTLKDGEVLQAKANDLILRKNVEYLLAEISGESCELRLDKIASFSHPEIGTVVVSES

Specific function: Suppresses temperature-sensitive mutations in essential genes by modulating rho-dependent transcription termination [H]

COG id: COG4568

COG function: function code K; Transcriptional antiterminator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081698, Length=63, Percent_Identity=79.3650793650794, Blast_Score=101, Evalue=8e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002730
- InterPro:   IPR009778 [H]

Pfam domain/function: PF07073 ROF [H]

EC number: NA

Molecular weight: Translated: 7089; Mature: 7089

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHHLILTLTLKDGEVLQAKANDLILRKNVEYLLAEISGESCELRLDKIASFSHPEIGTVV
CCEEEEEEEECCCCEEEECCCCEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCCEEEE
VSES
EECC
>Mature Secondary Structure
MHHLILTLTLKDGEVLQAKANDLILRKNVEYLLAEISGESCELRLDKIASFSHPEIGTVV
CCEEEEEEEECCCCEEEECCCCEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCCEEEE
VSES
EECC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9723924; 9278503 [H]