| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
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The map label for this gene is ybjX [H]
Identifier: 194736846
GI number: 194736846
Start: 1027916
End: 1028866
Strand: Reverse
Name: ybjX [H]
Synonym: SeSA_A1058
Alternate gene names: 194736846
Gene position: 1028866-1027916 (Counterclockwise)
Preceding gene: 194734305
Following gene: 194734796
Centisome position: 21.85
GC content: 46.9
Gene sequence:
>951_bases ATGACACAGCTTACAGATAATACCTGGTACACTTCAGATCACATCTCTCCTTTACAATTATTTATTCGTCTGACGCGCGG GCAATTACAGCCAGGAAAATTCTGGCGTAAAGCCAGCTTTCGTCGCAAGTTTTTAATCCGCTCATTAGTCATGCCGCGTG CGACCAGCCAATTACTGACCAATCTCACCCAATGGCCGGAGTTAAATACGTTACTTGCTCGTCAGCCGCGTTTGCCTATT CGGCTACATCGTCCTTATATGGCTGTAAATATTAAACGCGATTTCGCCTTAGACGCTCTGTGTTTTCATTATCAACAGAT GCGCCAACTTTTATCGCGGGAACAACAAGTTAGCTATTTAAGTCAGTATGGCCTGAATCTTGCTAAATTTGAAACTAAAA CCGGCGAGTTGTTTCAACTTGATTTAGTCAGTCTGGTCTCACTGGATAAAGAAGGTGAAAGCACTATTGTTGTTCGCGAC GCACAGTTACGTATTCTGGCAGAGATCACATTTACCCTGTGTCGCTTTAACCAACAACGCACACTATTTATCGGCGGATT ACAGGGCGCGGCAAACGACGTTCCTCACGAAATTATCCAGCAGGCGACCAAAGCCTGCCATGGTCTTTTTCCCAAACGCA TCGTGATGGAGGCTCTCTGTCAGTTTGCGCAAGTCTTTCAGGCGGAGCAGATTATAGCCGTGAGTAACGATGCGCACGTT TACCGTAGCTGGCGATACATGGATAAAAAGACGCAAATGCATGCCGACTATGACGCGTTTTGGGAATCGTTAGGCGGTGA AAGAATTAAAGGGAATTACTATACGCTACCGCTGGCGATCGCCCGAAAAAGCGAAGCGGAGATCGCCAGTAAAAAACGGG CCGAGTATCGCCGCCGCTATGCTTTACTCGATAGCGTTGTCGAACAGGTTTCGGCCACATTCAAACGCTAA
Upstream 100 bases:
>100_bases AAACAAACCTGACACAATAAAGATAGCGTCGGCTGTATTGACGATTGGTTAATGTTTCCTGTGGTTCAATCTCGACAATC TTATGTCGCGGATTACGATC
Downstream 100 bases:
>100_bases TCCGCCCGGCCCCGCGCCAGCCAAACCACGCGCGAGAACATCTTTCTGAACAGCGGCGGCACGGCGTCAATTCCCCGCCG CCCGGCTTCCATCGCGACTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MTQLTDNTWYTSDHISPLQLFIRLTRGQLQPGKFWRKASFRRKFLIRSLVMPRATSQLLTNLTQWPELNTLLARQPRLPI RLHRPYMAVNIKRDFALDALCFHYQQMRQLLSREQQVSYLSQYGLNLAKFETKTGELFQLDLVSLVSLDKEGESTIVVRD AQLRILAEITFTLCRFNQQRTLFIGGLQGAANDVPHEIIQQATKACHGLFPKRIVMEALCQFAQVFQAEQIIAVSNDAHV YRSWRYMDKKTQMHADYDAFWESLGGERIKGNYYTLPLAIARKSEAEIASKKRAEYRRRYALLDSVVEQVSATFKR
Sequences:
>Translated_316_residues MTQLTDNTWYTSDHISPLQLFIRLTRGQLQPGKFWRKASFRRKFLIRSLVMPRATSQLLTNLTQWPELNTLLARQPRLPI RLHRPYMAVNIKRDFALDALCFHYQQMRQLLSREQQVSYLSQYGLNLAKFETKTGELFQLDLVSLVSLDKEGESTIVVRD AQLRILAEITFTLCRFNQQRTLFIGGLQGAANDVPHEIIQQATKACHGLFPKRIVMEALCQFAQVFQAEQIIAVSNDAHV YRSWRYMDKKTQMHADYDAFWESLGGERIKGNYYTLPLAIARKSEAEIASKKRAEYRRRYALLDSVVEQVSATFKR >Mature_315_residues TQLTDNTWYTSDHISPLQLFIRLTRGQLQPGKFWRKASFRRKFLIRSLVMPRATSQLLTNLTQWPELNTLLARQPRLPIR LHRPYMAVNIKRDFALDALCFHYQQMRQLLSREQQVSYLSQYGLNLAKFETKTGELFQLDLVSLVSLDKEGESTIVVRDA QLRILAEITFTLCRFNQQRTLFIGGLQGAANDVPHEIIQQATKACHGLFPKRIVMEALCQFAQVFQAEQIIAVSNDAHVY RSWRYMDKKTQMHADYDAFWESLGGERIKGNYYTLPLAIARKSEAEIASKKRAEYRRRYALLDSVVEQVSATFKR
Specific function: Unknown
COG id: COG2990
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_0461 [H]
Homologues:
Organism=Escherichia coli, GI1787103, Length=315, Percent_Identity=57.4603174603175, Blast_Score=370, Evalue=1e-104,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007488 [H]
Pfam domain/function: PF04393 DUF535 [H]
EC number: NA
Molecular weight: Translated: 36785; Mature: 36654
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQLTDNTWYTSDHISPLQLFIRLTRGQLQPGKFWRKASFRRKFLIRSLVMPRATSQLLT CCCCCCCCEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH NLTQWPELNTLLARQPRLPIRLHRPYMAVNIKRDFALDALCFHYQQMRQLLSREQQVSYL HHHCCCCHHHHHHCCCCCCEEECCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH SQYGLNLAKFETKTGELFQLDLVSLVSLDKEGESTIVVRDAQLRILAEITFTLCRFNQQR HHHCCCCEEEECCCCCEEHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCC TLFIGGLQGAANDVPHEIIQQATKACHGLFPKRIVMEALCQFAQVFQAEQIIAVSNDAHV EEEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEEECCCHHH YRSWRYMDKKTQMHADYDAFWESLGGERIKGNYYTLPLAIARKSEAEIASKKRAEYRRRY HHHHHHHHHHHHHCCCHHHHHHHCCCCEECCCEEEEEHEECCCCHHHHHHHHHHHHHHHH ALLDSVVEQVSATFKR HHHHHHHHHHHHHHCC >Mature Secondary Structure TQLTDNTWYTSDHISPLQLFIRLTRGQLQPGKFWRKASFRRKFLIRSLVMPRATSQLLT CCCCCCCEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH NLTQWPELNTLLARQPRLPIRLHRPYMAVNIKRDFALDALCFHYQQMRQLLSREQQVSYL HHHCCCCHHHHHHCCCCCCEEECCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH SQYGLNLAKFETKTGELFQLDLVSLVSLDKEGESTIVVRDAQLRILAEITFTLCRFNQQR HHHCCCCEEEECCCCCEEHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCC TLFIGGLQGAANDVPHEIIQQATKACHGLFPKRIVMEALCQFAQVFQAEQIIAVSNDAHV EEEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEEECCCHHH YRSWRYMDKKTQMHADYDAFWESLGGERIKGNYYTLPLAIARKSEAEIASKKRAEYRRRY HHHHHHHHHHHHHCCCHHHHHHHCCCCEECCCEEEEEHEECCCCHHHHHHHHHHHHHHHH ALLDSVVEQVSATFKR HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503 [H]