Click here to switch to the map view.

The map label for this gene is yqjI [H]

Identifier: 194736657

GI number: 194736657

Start: 3287686

End: 3288330

Strand: Direct

Name: yqjI [H]

Synonym: SeSA_A3405

Alternate gene names: 194736657

Gene position: 3287686-3288330 (Clockwise)

Preceding gene: 194736124

Following gene: 194735369

Centisome position: 69.82

GC content: 53.8

Gene sequence:

>645_bases
ATGCAAAATCAACATGAAGGGTGTTGCAAAAACCGGGATCATAAGCACGATGGTTGCTGCAAAGATCGCGAACATCAGCA
TGAAGGCTGCCATAGCGCGCATCAGCATGAGAACGCCAGTTGCGGCGGCGAACACCGTCACGGACACGGCTGTGGTCGTC
ATGGACAGGGCGGTGGTCGACGCCAGCGATTTTTTGGCCACGGGGAACTTCGGCTGGTCATTCTTGATATCCTGACCCGG
GACGCCAGCCACGGCTATGAACTGATTAAAGCGATAGAAAACCTAACGGGGGGCGGCTATACGCCAAGCGCTGGCGTGAT
CTACCCTACGCTGGATTTTTTACAGGATCAGCAATTTATCACGATTAGCGACGAAGAAGGCGGGCGGAAAAAAATCGCGA
TTACCGCGAACGGCGCGCAATGGCTTGATGAAAATCGCGAACACCTGACGCATATTCAGGCGCGGCTAAAAGCCCGTTGT
GTGGGCATGGAGTTACGTAAAAATCCGCAGATGAAGCGGGCGCTGGATAACTTCAAGGCCGTGCTGGATCTGCGGATAAA
CCACAGCGATATCAACGACGCGCAAATCAAACGCATTATCGGCGTGATTGATCGCGCGGCGCTGGAAATCGCCGAACTGG
ATTAA

Upstream 100 bases:

>100_bases
CGTTATAAATTAATAGATTATAGCAACAATCGCTTTTACCCTTGCTAAAACCCATCATTTAGATATAAATTAGATATATC
TAAATAAGCAGGAGGCAATG

Downstream 100 bases:

>100_bases
GCGGGCTGCGTGTCCTCTTCGCGGACGCGGAACACGTTAACCAGCTCTTTTAAATGTAACGCCTGTTCGTTCAGCGACGC
TGCGGCGGCAACAGACTCTT

Product: transcriptional regulator, PadR family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MQNQHEGCCKNRDHKHDGCCKDREHQHEGCHSAHQHENASCGGEHRHGHGCGRHGQGGGRRQRFFGHGELRLVILDILTR
DASHGYELIKAIENLTGGGYTPSAGVIYPTLDFLQDQQFITISDEEGGRKKIAITANGAQWLDENREHLTHIQARLKARC
VGMELRKNPQMKRALDNFKAVLDLRINHSDINDAQIKRIIGVIDRAALEIAELD

Sequences:

>Translated_214_residues
MQNQHEGCCKNRDHKHDGCCKDREHQHEGCHSAHQHENASCGGEHRHGHGCGRHGQGGGRRQRFFGHGELRLVILDILTR
DASHGYELIKAIENLTGGGYTPSAGVIYPTLDFLQDQQFITISDEEGGRKKIAITANGAQWLDENREHLTHIQARLKARC
VGMELRKNPQMKRALDNFKAVLDLRINHSDINDAQIKRIIGVIDRAALEIAELD
>Mature_214_residues
MQNQHEGCCKNRDHKHDGCCKDREHQHEGCHSAHQHENASCGGEHRHGHGCGRHGQGGGRRQRFFGHGELRLVILDILTR
DASHGYELIKAIENLTGGGYTPSAGVIYPTLDFLQDQQFITISDEEGGRKKIAITANGAQWLDENREHLTHIQARLKARC
VGMELRKNPQMKRALDNFKAVLDLRINHSDINDAQIKRIIGVIDRAALEIAELD

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789452, Length=216, Percent_Identity=68.9814814814815, Blast_Score=260, Evalue=4e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005149
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03551 PadR [H]

EC number: NA

Molecular weight: Translated: 24042; Mature: 24042

Theoretical pI: Translated: 7.45; Mature: 7.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNQHEGCCKNRDHKHDGCCKDREHQHEGCHSAHQHENASCGGEHRHGHGCGRHGQGGGR
CCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
RQRFFGHGELRLVILDILTRDASHGYELIKAIENLTGGGYTPSAGVIYPTLDFLQDQQFI
CCCEECCCCEEEHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCEEECCHHHHCCCCEE
TISDEEGGRKKIAITANGAQWLDENREHLTHIQARLKARCVGMELRKNPQMKRALDNFKA
EEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHH
VLDLRINHSDINDAQIKRIIGVIDRAALEIAELD
HHEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQNQHEGCCKNRDHKHDGCCKDREHQHEGCHSAHQHENASCGGEHRHGHGCGRHGQGGGR
CCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
RQRFFGHGELRLVILDILTRDASHGYELIKAIENLTGGGYTPSAGVIYPTLDFLQDQQFI
CCCEECCCCEEEHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCEEECCHHHHCCCCEE
TISDEEGGRKKIAITANGAQWLDENREHLTHIQARLKARCVGMELRKNPQMKRALDNFKA
EEECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHH
VLDLRINHSDINDAQIKRIIGVIDRAALEIAELD
HHEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]