Click here to switch to the map view.

The map label for this gene is torT [H]

Identifier: 194736586

GI number: 194736586

Start: 3907122

End: 3908162

Strand: Reverse

Name: torT [H]

Synonym: SeSA_A4036

Alternate gene names: 194736586

Gene position: 3908162-3907122 (Counterclockwise)

Preceding gene: 194733906

Following gene: 194737058

Centisome position: 82.99

GC content: 54.66

Gene sequence:

>1041_bases
ATGCGCGCGCTTATTTCGTTCTTTTTTTTGATAATCATCGTCTCGAATGTAGAAACGGCGTCAGCCGAAACCGGACTGCT
ACACTGGACGCGCGCCGATCGGGCGATTCCCTGGCGGCAAACGTCAGTCAATGCGAGTAAACCCTGGAAACTGTGCGCAT
TATACCCCAGCCTGAAAGATTCTTACTGGTTGTCCGTCAACTACGGGATGCAAAAAGCGGCCAAATTGTATGGCGTTGAT
TTAAAAGTGCTGGAAGCGAATGGCTATCGGCAACTGGCGACGCAACAACAGCAAATGATGCAGTGCCGGGAGTGGGGTGC
CGACGCTATTCTGCTTGGCAGCAGTACCGATCGTTTCCCGGAGCTGGAACGGTATGCCGGTAATGTGCCGGTTATTGAAC
TGGTGAACATGATTCACGATGCCAGCGTCGCAACCCGCGTTGGTCTGCCGTGGTTTCAGATGGGGTATCTGCCGGGACGT
TTCCTGGTGCAGTGGAGCAAAGGAAAAGCGCTTAACGTTTTACTCTTCCCGGGGCCGGAAGAAGCCGGCGGCAGTCAGGA
GATGGTGGCGGGTTTTCGTCAGGCAATTAAAGGCAGCGCGATCAACATTGTGGATATCGCCTGGGGCGATAACGACATTG
AAGTGCAGCGAAACTTACTCCAGGAAATGCTGGAGCGCCATCCGGACGCCAATGTGGTCGCCGGGTCGGCGATAGCAGCG
GAGGCGGCGATGGGCGAAGGGCGAAATTTGACGACTCCGCTCACGATCGTCTCATTTTATCTGACGCATCAGGTTTATCG
CGGTTTAAAACGCGGCCATATCCTGATGGCGCTCAGCGATCAGATGGCCTGGCAGGGAGAATTAGCGATAACGCAGTCGA
TTAAGGTCTTACAGGGGCAACCGGTGCCTGAAAATATCAGCCCGCCGGTGCTTATTTTGACGCATAACAACGCCGACAGC
GCGCGCGTTCGCCGTTCGCTATCGCCTCCGGGATTTCGGCCCGTCTATCTGTATCAATACACCTCCGAGGCTAAAAAGTA
G

Upstream 100 bases:

>100_bases
GGTCAGTGAAGGCGTTGACATTTATGCGCCGCGGGTGAAATGGGTTGAGTTGCCGCCGGAAAAACCATTAGGATAAAACC
TTGTTGCTGGTGGGGCTATC

Downstream 100 bases:

>100_bases
CCTTCGCCATGCTGTGTGACCAGCAGTTCCGGCGTAATTTTATGGCGTAAGCGGCGAACCAGGACATCAATCGTGCGGAG
ATCCGGAGTCTCTACGCGGC

Product: TMAO reductase system periplasmic protein TorT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MRALISFFFLIIIVSNVETASAETGLLHWTRADRAIPWRQTSVNASKPWKLCALYPSLKDSYWLSVNYGMQKAAKLYGVD
LKVLEANGYRQLATQQQQMMQCREWGADAILLGSSTDRFPELERYAGNVPVIELVNMIHDASVATRVGLPWFQMGYLPGR
FLVQWSKGKALNVLLFPGPEEAGGSQEMVAGFRQAIKGSAINIVDIAWGDNDIEVQRNLLQEMLERHPDANVVAGSAIAA
EAAMGEGRNLTTPLTIVSFYLTHQVYRGLKRGHILMALSDQMAWQGELAITQSIKVLQGQPVPENISPPVLILTHNNADS
ARVRRSLSPPGFRPVYLYQYTSEAKK

Sequences:

>Translated_346_residues
MRALISFFFLIIIVSNVETASAETGLLHWTRADRAIPWRQTSVNASKPWKLCALYPSLKDSYWLSVNYGMQKAAKLYGVD
LKVLEANGYRQLATQQQQMMQCREWGADAILLGSSTDRFPELERYAGNVPVIELVNMIHDASVATRVGLPWFQMGYLPGR
FLVQWSKGKALNVLLFPGPEEAGGSQEMVAGFRQAIKGSAINIVDIAWGDNDIEVQRNLLQEMLERHPDANVVAGSAIAA
EAAMGEGRNLTTPLTIVSFYLTHQVYRGLKRGHILMALSDQMAWQGELAITQSIKVLQGQPVPENISPPVLILTHNNADS
ARVRRSLSPPGFRPVYLYQYTSEAKK
>Mature_346_residues
MRALISFFFLIIIVSNVETASAETGLLHWTRADRAIPWRQTSVNASKPWKLCALYPSLKDSYWLSVNYGMQKAAKLYGVD
LKVLEANGYRQLATQQQQMMQCREWGADAILLGSSTDRFPELERYAGNVPVIELVNMIHDASVATRVGLPWFQMGYLPGR
FLVQWSKGKALNVLLFPGPEEAGGSQEMVAGFRQAIKGSAINIVDIAWGDNDIEVQRNLLQEMLERHPDANVVAGSAIAA
EAAMGEGRNLTTPLTIVSFYLTHQVYRGLKRGHILMALSDQMAWQGELAITQSIKVLQGQPVPENISPPVLILTHNNADS
ARVRRSLSPPGFRPVYLYQYTSEAKK

Specific function: Upon binding a putative inducer it probably interacts with torS and allows it to play a role in the induction of the torCAD operon for trimethylamine N-oxide reductase [H]

COG id: COG1879

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787228, Length=327, Percent_Identity=68.8073394495413, Blast_Score=455, Evalue=1e-129,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001761
- InterPro:   IPR014301 [H]

Pfam domain/function: PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 38503; Mature: 38503

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRALISFFFLIIIVSNVETASAETGLLHWTRADRAIPWRQTSVNASKPWKLCALYPSLKD
CHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCC
SYWLSVNYGMQKAAKLYGVDLKVLEANGYRQLATQQQQMMQCREWGADAILLGSSTDRFP
CEEEEEECCHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCC
ELERYAGNVPVIELVNMIHDASVATRVGLPWFQMGYLPGRFLVQWSKGKALNVLLFPGPE
HHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEEEECCCCEEEEEEECCCC
EAGGSQEMVAGFRQAIKGSAINIVDIAWGDNDIEVQRNLLQEMLERHPDANVVAGSAIAA
CCCCCHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEECCHHHH
EAAMGEGRNLTTPLTIVSFYLTHQVYRGLKRGHILMALSDQMAWQGELAITQSIKVLQGQ
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEHHHHHHHHCCC
PVPENISPPVLILTHNNADSARVRRSLSPPGFRPVYLYQYTSEAKK
CCCCCCCCCEEEEEECCCCHHHHHHCCCCCCCCEEEEEEECCCCCC
>Mature Secondary Structure
MRALISFFFLIIIVSNVETASAETGLLHWTRADRAIPWRQTSVNASKPWKLCALYPSLKD
CHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCC
SYWLSVNYGMQKAAKLYGVDLKVLEANGYRQLATQQQQMMQCREWGADAILLGSSTDRFP
CEEEEEECCHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCC
ELERYAGNVPVIELVNMIHDASVATRVGLPWFQMGYLPGRFLVQWSKGKALNVLLFPGPE
HHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEEEECCCCEEEEEEECCCC
EAGGSQEMVAGFRQAIKGSAINIVDIAWGDNDIEVQRNLLQEMLERHPDANVVAGSAIAA
CCCCCHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEECCHHHH
EAAMGEGRNLTTPLTIVSFYLTHQVYRGLKRGHILMALSDQMAWQGELAITQSIKVLQGQ
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEHHHHHHHHCCC
PVPENISPPVLILTHNNADSARVRRSLSPPGFRPVYLYQYTSEAKK
CCCCCCCCCEEEEEECCCCHHHHHHCCCCCCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]