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The map label for this gene is licR [H]

Identifier: 194736571

GI number: 194736571

Start: 4565375

End: 4567288

Strand: Direct

Name: licR [H]

Synonym: SeSA_A4699

Alternate gene names: 194736571

Gene position: 4565375-4567288 (Clockwise)

Preceding gene: 194735522

Following gene: 194737059

Centisome position: 96.95

GC content: 53.5

Gene sequence:

>1914_bases
GTGCGATTCCCCAACCAACGTTTAGCGCAGCTATTTGCGATGCTGCAAAACGAGACGCTGCCGCAGGACGAGCTGGCGCA
GCGGTTGTCGGTCTCCACGCGTACTGTTCGGGCGGATATCGCCGCGCTGAACATGTTGCTGACGCCGCATGGCGCGCAAT
TTACTCTCAGCCGCGGCAATGGGTATCAGCTCAAAATTGATGATCCGGCACGTTATCAATCCCTGCAAACGCAGCAATCT
CCCACGCTGGCGCGCGGTCCGCGCACCAGCCAGGAGCGGATACACTATTTGCTGGCGCGTTTTTTAACCTCCGCTTTCTC
GCTGAAGCTGGAGGATTTAGCAGATGAATGGTTTGTCAGCCGTGCGACGTTGCAGAACGATATGGCGGACGTGCGCGAGC
ATTTGCTGCGTTATCATCTGACGCTGGAAACGCGTCCGCGTCATGGCATGAAACTGTTTGGCGGAGAGATGGCGATTCGC
GCCTGTCTGACCGACCTTTTATGGACGCTGGCGCAGCAGGAGCCCTCCCATCCGTTAATTGTTAGTACCACGCTGAACAC
CGAGGTGTCTCAACGGCTGCAGTCTCTTTTGCCGGATATTTTCTCTCATTGTCAAATCCGCCTGACCGATGAGGGCGAGC
TGTTTCTGCGTTTATACTGCGCGGTGGCGGTACGGCGTATTCGCGAGGGGTATCCGTTATCGGAATGCGTGGCGGAGGAG
GTCGATGAAAAGGTGCGCCATGCGGCGCATGAAATTGCGGAGCTACTACAACAGCTGGCCGACAAGCCGCTGTCGGAGCC
GGAAGTAAGCTGGCTGAAGGTGCATATTGCCGCCCGCCAGGTACAGGAGATTGCCCCCAGCGCCATTAATGCCGATGATG
AAGAGGCGCTGGTGCGCTATATCCTCAATTTTATTAATACCCAGTACAACTATAACCTATTGAATGATAAACAGCTTCAC
GCGGACTTGCTGACCCACATCAAAACGATGATCACCCGCGTGCGCTACCAGATCATGATCCCCAACCCACTACTGGAAAA
TATTAAGCAGCACTATCCGATGGCGTGGGATATGACATTGGCGGCGATATCGAGTTGGGGAAAATACACGCCGTATACCA
TTAGCGAAAACGAAATCGGTTTTCTGGTGCTGCATATTGGCGTTGGGCTGGAACGTAGTTACAACATTGGCTACCAGCGG
CAGCCGCAGGTACTGCTGGTGTGTGATGCTGGTAATGCGATGGTGCGGATGATTGAAGCGGTACTGGCGCGGAAATACCC
GCAGATTGAGATAGCCCGCACTTTGACGCTACGCGACTATGAGGCGCGGGACAGTATTGTGGAGGATTTTGTGATTTCCA
CGGCGCGGATCGGTGAAAAAGATAAACCGGTCATCATGATCGCGCCCTTTCCTACCGACTATCAATTGGAGCAGATCGGT
AAGCTGGTGCTGGTGGACAGAACCCGTCCGTGGATGCTGGATAAATATTTCGATGCCTCGCATTTTCGCATTGTGGAAGG
GGAAATAGATCAACAGACGCTGTTTAAAACGCTGTGCGATCAGTTGCATGAGGAAGGCTTTGTTGATGCGGCGTTTCTCG
ATTCGGTTATTGAACGTGAAGCTATCGTCAGTACGTTATTAGGCGACGGGATTGCCTTGCCACACGCGCTGGGGCTGCTG
GCGAAGAAAACGGTGGTTTATACGGTGCTCGCGCCACAGGGGATTGCCTGGGGTGATGAAACGGCGCACGTTATTTTTTT
ACTCGCCATCAGCAAAAGTGAATATGAAGAGGCGATGGCCATCTACGATATTTTCGTCACTTTCCTGCGCGAACGCGCCA
TGACGCGCCTCTGCGCATGTCAGAATTTTACGCAATTTAAAACGGTCGCGATGGAGTGCGTGAGTCGTTTTTGA

Upstream 100 bases:

>100_bases
TCGATTATTGATAAGGTGAGCGGCAACACCCGTGCGGACGATGTGCGTCAGTTACTCGCTATCGTCCGGTCGCGTGTCGG
CTAATCATGAGGAGAGAGAC

Downstream 100 bases:

>100_bases
GAGGCGTTATCCAGAATTCGATGTAATGCGAATGTAATGCTAAACTGCATTACACATTCGATTTTACTGGAGGCATAATG
GCCACGCTGAACGTCCGTCT

Product: transcriptional antiterminator, BglG

Products: NA

Alternate protein names: Putative phosphotransferase enzyme IIB component; Putative PTS system EIIB component; Putative phosphotransferase enzyme IIA component; Putative PTS system EIIA component [H]

Number of amino acids: Translated: 637; Mature: 637

Protein sequence:

>637_residues
MRFPNQRLAQLFAMLQNETLPQDELAQRLSVSTRTVRADIAALNMLLTPHGAQFTLSRGNGYQLKIDDPARYQSLQTQQS
PTLARGPRTSQERIHYLLARFLTSAFSLKLEDLADEWFVSRATLQNDMADVREHLLRYHLTLETRPRHGMKLFGGEMAIR
ACLTDLLWTLAQQEPSHPLIVSTTLNTEVSQRLQSLLPDIFSHCQIRLTDEGELFLRLYCAVAVRRIREGYPLSECVAEE
VDEKVRHAAHEIAELLQQLADKPLSEPEVSWLKVHIAARQVQEIAPSAINADDEEALVRYILNFINTQYNYNLLNDKQLH
ADLLTHIKTMITRVRYQIMIPNPLLENIKQHYPMAWDMTLAAISSWGKYTPYTISENEIGFLVLHIGVGLERSYNIGYQR
QPQVLLVCDAGNAMVRMIEAVLARKYPQIEIARTLTLRDYEARDSIVEDFVISTARIGEKDKPVIMIAPFPTDYQLEQIG
KLVLVDRTRPWMLDKYFDASHFRIVEGEIDQQTLFKTLCDQLHEEGFVDAAFLDSVIEREAIVSTLLGDGIALPHALGLL
AKKTVVYTVLAPQGIAWGDETAHVIFLLAISKSEYEEAMAIYDIFVTFLRERAMTRLCACQNFTQFKTVAMECVSRF

Sequences:

>Translated_637_residues
MRFPNQRLAQLFAMLQNETLPQDELAQRLSVSTRTVRADIAALNMLLTPHGAQFTLSRGNGYQLKIDDPARYQSLQTQQS
PTLARGPRTSQERIHYLLARFLTSAFSLKLEDLADEWFVSRATLQNDMADVREHLLRYHLTLETRPRHGMKLFGGEMAIR
ACLTDLLWTLAQQEPSHPLIVSTTLNTEVSQRLQSLLPDIFSHCQIRLTDEGELFLRLYCAVAVRRIREGYPLSECVAEE
VDEKVRHAAHEIAELLQQLADKPLSEPEVSWLKVHIAARQVQEIAPSAINADDEEALVRYILNFINTQYNYNLLNDKQLH
ADLLTHIKTMITRVRYQIMIPNPLLENIKQHYPMAWDMTLAAISSWGKYTPYTISENEIGFLVLHIGVGLERSYNIGYQR
QPQVLLVCDAGNAMVRMIEAVLARKYPQIEIARTLTLRDYEARDSIVEDFVISTARIGEKDKPVIMIAPFPTDYQLEQIG
KLVLVDRTRPWMLDKYFDASHFRIVEGEIDQQTLFKTLCDQLHEEGFVDAAFLDSVIEREAIVSTLLGDGIALPHALGLL
AKKTVVYTVLAPQGIAWGDETAHVIFLLAISKSEYEEAMAIYDIFVTFLRERAMTRLCACQNFTQFKTVAMECVSRF
>Mature_637_residues
MRFPNQRLAQLFAMLQNETLPQDELAQRLSVSTRTVRADIAALNMLLTPHGAQFTLSRGNGYQLKIDDPARYQSLQTQQS
PTLARGPRTSQERIHYLLARFLTSAFSLKLEDLADEWFVSRATLQNDMADVREHLLRYHLTLETRPRHGMKLFGGEMAIR
ACLTDLLWTLAQQEPSHPLIVSTTLNTEVSQRLQSLLPDIFSHCQIRLTDEGELFLRLYCAVAVRRIREGYPLSECVAEE
VDEKVRHAAHEIAELLQQLADKPLSEPEVSWLKVHIAARQVQEIAPSAINADDEEALVRYILNFINTQYNYNLLNDKQLH
ADLLTHIKTMITRVRYQIMIPNPLLENIKQHYPMAWDMTLAAISSWGKYTPYTISENEIGFLVLHIGVGLERSYNIGYQR
QPQVLLVCDAGNAMVRMIEAVLARKYPQIEIARTLTLRDYEARDSIVEDFVISTARIGEKDKPVIMIAPFPTDYQLEQIG
KLVLVDRTRPWMLDKYFDASHFRIVEGEIDQQTLFKTLCDQLHEEGFVDAAFLDSVIEREAIVSTLLGDGIALPHALGLL
AKKTVVYTVLAPQGIAWGDETAHVIFLLAISKSEYEEAMAIYDIFVTFLRERAMTRLCACQNFTQFKTVAMECVSRF

Specific function: Positive regulator of the licABCH operon [H]

COG id: COG3711

COG function: function code K; Transcriptional antiterminator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIB type-2 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196
- InterPro:   IPR007737
- InterPro:   IPR011608
- InterPro:   IPR016152
- InterPro:   IPR002178
- InterPro:   IPR013011
- InterPro:   IPR003501
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08279 HTH_11; PF05043 Mga; PF00874 PRD; PF00359 PTS_EIIA_2; PF02302 PTS_IIB [H]

EC number: =2.7.1.69 [H]

Molecular weight: Translated: 72755; Mature: 72755

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: PS00894 HTH_DEOR_1 ; PS00372 PTS_EIIA_TYPE_2_HIS ; PS51094 PTS_EIIA_TYPE_2 ; PS51099 PTS_EIIB_TYPE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFPNQRLAQLFAMLQNETLPQDELAQRLSVSTRTVRADIAALNMLLTPHGAQFTLSRGN
CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCC
GYQLKIDDPARYQSLQTQQSPTLARGPRTSQERIHYLLARFLTSAFSLKLEDLADEWFVS
CEEEEECCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RATLQNDMADVREHLLRYHLTLETRPRHGMKLFGGEMAIRACLTDLLWTLAQQEPSHPLI
HHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
VSTTLNTEVSQRLQSLLPDIFSHCQIRLTDEGELFLRLYCAVAVRRIREGYPLSECVAEE
EEEECCHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH
VDEKVRHAAHEIAELLQQLADKPLSEPEVSWLKVHIAARQVQEIAPSAINADDEEALVRY
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
ILNFINTQYNYNLLNDKQLHADLLTHIKTMITRVRYQIMIPNPLLENIKQHYPMAWDMTL
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHCCCHHHHHH
AAISSWGKYTPYTISENEIGFLVLHIGVGLERSYNIGYQRQPQVLLVCDAGNAMVRMIEA
HHHHHCCCCCCEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHH
VLARKYPQIEIARTLTLRDYEARDSIVEDFVISTARIGEKDKPVIMIAPFPTDYQLEQIG
HHHCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHCC
KLVLVDRTRPWMLDKYFDASHFRIVEGEIDQQTLFKTLCDQLHEEGFVDAAFLDSVIERE
CEEEEECCCCCHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
AIVSTLLGDGIALPHALGLLAKKTVVYTVLAPQGIAWGDETAHVIFLLAISKSEYEEAMA
HHHHHHHCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCEEEEEEEECHHHHHHHHH
IYDIFVTFLRERAMTRLCACQNFTQFKTVAMECVSRF
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRFPNQRLAQLFAMLQNETLPQDELAQRLSVSTRTVRADIAALNMLLTPHGAQFTLSRGN
CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCC
GYQLKIDDPARYQSLQTQQSPTLARGPRTSQERIHYLLARFLTSAFSLKLEDLADEWFVS
CEEEEECCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RATLQNDMADVREHLLRYHLTLETRPRHGMKLFGGEMAIRACLTDLLWTLAQQEPSHPLI
HHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
VSTTLNTEVSQRLQSLLPDIFSHCQIRLTDEGELFLRLYCAVAVRRIREGYPLSECVAEE
EEEECCHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH
VDEKVRHAAHEIAELLQQLADKPLSEPEVSWLKVHIAARQVQEIAPSAINADDEEALVRY
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
ILNFINTQYNYNLLNDKQLHADLLTHIKTMITRVRYQIMIPNPLLENIKQHYPMAWDMTL
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHCCCHHHHHH
AAISSWGKYTPYTISENEIGFLVLHIGVGLERSYNIGYQRQPQVLLVCDAGNAMVRMIEA
HHHHHCCCCCCEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHH
VLARKYPQIEIARTLTLRDYEARDSIVEDFVISTARIGEKDKPVIMIAPFPTDYQLEQIG
HHHCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHCC
KLVLVDRTRPWMLDKYFDASHFRIVEGEIDQQTLFKTLCDQLHEEGFVDAAFLDSVIERE
CEEEEECCCCCHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
AIVSTLLGDGIALPHALGLLAKKTVVYTVLAPQGIAWGDETAHVIFLLAISKSEYEEAMA
HHHHHHHCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCEEEEEEEECHHHHHHHHH
IYDIFVTFLRERAMTRLCACQNFTQFKTVAMECVSRF
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8990303; 8969509; 9384377; 10438772 [H]