| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
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The map label for this gene is phsA [H]
Identifier: 194736523
GI number: 194736523
Start: 2118400
End: 2120676
Strand: Reverse
Name: phsA [H]
Synonym: SeSA_A2235
Alternate gene names: 194736523
Gene position: 2120676-2118400 (Counterclockwise)
Preceding gene: 194737371
Following gene: 194736046
Centisome position: 45.03
GC content: 55.38
Gene sequence:
>2277_bases ATGAGCATTAGTCGTCGTTCTTTTTTGCAGGGGGTAGGCATCGGCTGCTCTGCCTGCGCGCTGGGCGCTTTTCCGCCCGG GGCGCTGGCGCGCAACCCGATTGCCGGCATTAACGGTAAAACCACGCTAACGCCAAGCTTGTGCGAAATGTGTTCCTTTC GTTGCCCTATTCAGGCGCAGGTAGTCAATAACAAGACCGTTTTTATCCAGGGCAATCCTTCTGCGCCGCAGCAGGGGACG CGCATATGCGCCAGGGGCGGGAGCGGCGTCAGCCTGGTCAATGACCCGCAACGGATTGTAAAACCTATGAAACGCACCGG GCCACGCGGCGACGGTGAATGGCAGGTGATTAGCTGGCAACAGGCTTACCAGGAAATCGCGGCGAAAATGAATGCCATCA AAGTGCAGCATGGCCCCGAGACCGTGGCTTTCTCTTCCAAATCGGGCTCGCTCTCCAGCCATCTTTTCCATCTGGCTACG GCCTTTGGTTCGCCTAATACCTTTACTCACGCCTCAACATGCCCTGCCGGGAAAGCCATTGCGGCAAAAGTGATGATGGG CGGCGATCTGGCGATGGATATCGCTAACACGCGCTATCTGGTTTCGTTTGGCCACAATTTGTATGAAGGGATTGAAGTTG CCGATACCCATGAGTTAATGACCGCGCAGGAGAAGGGGGCCAAAATGGTGAGCTTCGATCCGCGTTTGTCGATATTTTCC AGCAAGGCGGATGAGTGGCACGCTATTCGTCCCGGGGGGGATTTAGCGGTTCTGCTGGCGATGTGCCACGTCATGATTGA TGAACAACTCTACGATGCGTCTTTTGTTGAGCGTTATACCAGCGGATTTGAACAGTTAGCACAGGCGGTAAAAGAGACGA CGCCGGAATGGGCCGCCGCGCAGGCCGATGTCCCGGCCGACGTTATTGTCCGGGTGACACGCGAACTGGCCGCCTGCGCG CCTCACGCTATTGTCAGTCCTGGTCATCGCGCGACGTTCTCGCAGGAAGAGATCGATATGCGGCGTATGATTTTTACGCT TAATGTACTGCTCGGTAATATTGAGCGTGAAGGCGGGCTATATCAGAAAAAAAACGCGTCGGTTTACAACAAACTGGCCG GAGAAAAGGTCGCGCCAACGCTGGCGAAACTCAACATTAAAAATATGCCGAAACCGACGGCGCAACGAATCGATTTGGTC GCACCGCAGTTTAAATATATCGCCGCTGGCGGCGGCGTGGTGCAAAGCATTATTGACGCGGTGTTAACCCAGAAGCCTTA CCCGGTAAAGGCGTGGATTATGTCGCGGCATAATCCTTTCCAGACCGTCACCTGTCGTTCGGACCTGGTAAAAACCGTTG AGCAACTGGATCTGGTGGTTAGCTGCGATGTCTATTTGAGCGAGAGCGCGGCGTATGCCGACTATCTGCTGCCGGAATGC ACTTATCTCGAACGGGACGAAGAGGTATCGGATATGTCGGGACTGCACCCGGCTTACGCTCTGCGCCAACAGGTCGTAGA GCCGATTGGCGAGGCGCGTCCGAGTTGGCAAATCTGGAAAGAACTTGGCGAGCAGTTGGGATTAGGGCAGTACTATCCGT GGCAGGATATGCAGACGCGCCAACTCTATCAGTTGAACGGCGACCATGCCTTAGCGAAGGAACTGCGACAGAAAGGGTAT CTCGAATGGGGCGTTCCGCTGCTATTACGCGAACCAGAATCCGTTCGCCAGTTTACGGCGCGTTACCCCGGCGCTATCGC GACGGACAGCGACAACACCTATGGCGAACAGCTTCGCTTCAAATCGCCCTCCGGCAAAATCGAACTTTATTCCGCAACCC TGGAGGAATTGCTCCCAGGCTACGGCGTTCCGCGCGTTCGTGACTTTGCGCTTAAAAAAGAGAATGAGCTTTACTTCATT CAGGGCAAAGTGGCCGTGCATACCAATGGCGCGACGCAGTACGTACCTTTACTCAGCGAGCTAATGTGGGATAACGCGGT CTGGGTCCATCCGCAAACGGCGCAAGAAAAAGGCATTAAGACCGGCGATGAGATCTGGCTGGAAAATGCTACGGGTAAAG AGAAAGGTAAGGCGCTGGTGACGCCCGGAATCCGCCCGGACACGCTTTTTGTCTATATGGGATTTGGCGCTAAAGCTGGG GCCAAAACGGCGGCGACGACACACGGTATCCACTGCGGAAATTTACTGCCGCACGTGACGAGTCCGGTATCCGGTACGGT AGTGCATACCGCAGGCGTGACGCTGAGCCGGGCATGA
Upstream 100 bases:
>100_bases CGTGTTCATTTTAACAACTATTTCAAATTGTGATTGAAGCCGACATTTCATAATACAAATTAAATATAATCTTCAGCTAT ATCTAATAACAGGAGGTTAT
Downstream 100 bases:
>100_bases GGGAGGAGGGAACCATGAATCATTTAACGAATCAGTACGTCATGCTGCATGATGAAAAACGTTGTATCGGCTGCCAGGCG TGTACCGTTGCCTGCAAAGT
Product: thiosulfate reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 758; Mature: 757
Protein sequence:
>758_residues MSISRRSFLQGVGIGCSACALGAFPPGALARNPIAGINGKTTLTPSLCEMCSFRCPIQAQVVNNKTVFIQGNPSAPQQGT RICARGGSGVSLVNDPQRIVKPMKRTGPRGDGEWQVISWQQAYQEIAAKMNAIKVQHGPETVAFSSKSGSLSSHLFHLAT AFGSPNTFTHASTCPAGKAIAAKVMMGGDLAMDIANTRYLVSFGHNLYEGIEVADTHELMTAQEKGAKMVSFDPRLSIFS SKADEWHAIRPGGDLAVLLAMCHVMIDEQLYDASFVERYTSGFEQLAQAVKETTPEWAAAQADVPADVIVRVTRELAACA PHAIVSPGHRATFSQEEIDMRRMIFTLNVLLGNIEREGGLYQKKNASVYNKLAGEKVAPTLAKLNIKNMPKPTAQRIDLV APQFKYIAAGGGVVQSIIDAVLTQKPYPVKAWIMSRHNPFQTVTCRSDLVKTVEQLDLVVSCDVYLSESAAYADYLLPEC TYLERDEEVSDMSGLHPAYALRQQVVEPIGEARPSWQIWKELGEQLGLGQYYPWQDMQTRQLYQLNGDHALAKELRQKGY LEWGVPLLLREPESVRQFTARYPGAIATDSDNTYGEQLRFKSPSGKIELYSATLEELLPGYGVPRVRDFALKKENELYFI QGKVAVHTNGATQYVPLLSELMWDNAVWVHPQTAQEKGIKTGDEIWLENATGKEKGKALVTPGIRPDTLFVYMGFGAKAG AKTAATTHGIHCGNLLPHVTSPVSGTVVHTAGVTLSRA
Sequences:
>Translated_758_residues MSISRRSFLQGVGIGCSACALGAFPPGALARNPIAGINGKTTLTPSLCEMCSFRCPIQAQVVNNKTVFIQGNPSAPQQGT RICARGGSGVSLVNDPQRIVKPMKRTGPRGDGEWQVISWQQAYQEIAAKMNAIKVQHGPETVAFSSKSGSLSSHLFHLAT AFGSPNTFTHASTCPAGKAIAAKVMMGGDLAMDIANTRYLVSFGHNLYEGIEVADTHELMTAQEKGAKMVSFDPRLSIFS SKADEWHAIRPGGDLAVLLAMCHVMIDEQLYDASFVERYTSGFEQLAQAVKETTPEWAAAQADVPADVIVRVTRELAACA PHAIVSPGHRATFSQEEIDMRRMIFTLNVLLGNIEREGGLYQKKNASVYNKLAGEKVAPTLAKLNIKNMPKPTAQRIDLV APQFKYIAAGGGVVQSIIDAVLTQKPYPVKAWIMSRHNPFQTVTCRSDLVKTVEQLDLVVSCDVYLSESAAYADYLLPEC TYLERDEEVSDMSGLHPAYALRQQVVEPIGEARPSWQIWKELGEQLGLGQYYPWQDMQTRQLYQLNGDHALAKELRQKGY LEWGVPLLLREPESVRQFTARYPGAIATDSDNTYGEQLRFKSPSGKIELYSATLEELLPGYGVPRVRDFALKKENELYFI QGKVAVHTNGATQYVPLLSELMWDNAVWVHPQTAQEKGIKTGDEIWLENATGKEKGKALVTPGIRPDTLFVYMGFGAKAG AKTAATTHGIHCGNLLPHVTSPVSGTVVHTAGVTLSRA >Mature_757_residues SISRRSFLQGVGIGCSACALGAFPPGALARNPIAGINGKTTLTPSLCEMCSFRCPIQAQVVNNKTVFIQGNPSAPQQGTR ICARGGSGVSLVNDPQRIVKPMKRTGPRGDGEWQVISWQQAYQEIAAKMNAIKVQHGPETVAFSSKSGSLSSHLFHLATA FGSPNTFTHASTCPAGKAIAAKVMMGGDLAMDIANTRYLVSFGHNLYEGIEVADTHELMTAQEKGAKMVSFDPRLSIFSS KADEWHAIRPGGDLAVLLAMCHVMIDEQLYDASFVERYTSGFEQLAQAVKETTPEWAAAQADVPADVIVRVTRELAACAP HAIVSPGHRATFSQEEIDMRRMIFTLNVLLGNIEREGGLYQKKNASVYNKLAGEKVAPTLAKLNIKNMPKPTAQRIDLVA PQFKYIAAGGGVVQSIIDAVLTQKPYPVKAWIMSRHNPFQTVTCRSDLVKTVEQLDLVVSCDVYLSESAAYADYLLPECT YLERDEEVSDMSGLHPAYALRQQVVEPIGEARPSWQIWKELGEQLGLGQYYPWQDMQTRQLYQLNGDHALAKELRQKGYL EWGVPLLLREPESVRQFTARYPGAIATDSDNTYGEQLRFKSPSGKIELYSATLEELLPGYGVPRVRDFALKKENELYFIQ GKVAVHTNGATQYVPLLSELMWDNAVWVHPQTAQEKGIKTGDEIWLENATGKEKGKALVTPGIRPDTLFVYMGFGAKAGA KTAATTHGIHCGNLLPHVTSPVSGTVVHTAGVTLSRA
Specific function: Oxidoreductase which produces hydrogen sulfide from thiosulfate (Potential) [H]
COG id: COG0243
COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing
Gene ontology:
Cell location: Cytoplasm Face Of The Membrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI1787870, Length=835, Percent_Identity=26.7065868263473, Blast_Score=200, Evalue=4e-52, Organism=Escherichia coli, GI87081797, Length=791, Percent_Identity=25.5372945638432, Blast_Score=185, Evalue=1e-47, Organism=Escherichia coli, GI171474008, Length=828, Percent_Identity=25.1207729468599, Blast_Score=176, Evalue=6e-45, Organism=Escherichia coli, GI3868721, Length=730, Percent_Identity=24.5205479452055, Blast_Score=154, Evalue=1e-38, Organism=Escherichia coli, GI1787231, Length=717, Percent_Identity=22.1757322175732, Blast_Score=102, Evalue=7e-23, Organism=Escherichia coli, GI87081994, Length=795, Percent_Identity=22.3899371069182, Blast_Score=102, Evalue=1e-22, Organism=Escherichia coli, GI1788534, Length=822, Percent_Identity=20.6812652068127, Blast_Score=70, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009010 - InterPro: IPR006657 - InterPro: IPR006656 - InterPro: IPR006963 - InterPro: IPR006655 - InterPro: IPR006311 [H]
Pfam domain/function: PF04879 Molybdop_Fe4S4; PF00384 Molybdopterin; PF01568 Molydop_binding [H]
EC number: 1.8.99.- [C]
Molecular weight: Translated: 82841; Mature: 82709
Theoretical pI: Translated: 7.56; Mature: 7.56
Prosite motif: PS00551 MOLYBDOPTERIN_PROK_1 ; PS00490 MOLYBDOPTERIN_PROK_2 ; PS00932 MOLYBDOPTERIN_PROK_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSISRRSFLQGVGIGCSACALGAFPPGALARNPIAGINGKTTLTPSLCEMCSFRCPIQAQ CCCCHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEECHHHHHHHCCCCCEEEE VVNNKTVFIQGNPSAPQQGTRICARGGSGVSLVNDPQRIVKPMKRTGPRGDGEWQVISWQ EECCEEEEEECCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEHH QAYQEIAAKMNAIKVQHGPETVAFSSKSGSLSSHLFHLATAFGSPNTFTHASTCPAGKAI HHHHHHHHHHHHEEEECCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH AAKVMMGGDLAMDIANTRYLVSFGHNLYEGIEVADTHELMTAQEKGAKMVSFDPRLSIFS HHHEEECCCEEEECCCCEEEEECCCHHHHCCCCCCHHHHHHHHHHCCEEEECCCCHHHHC SKADEWHAIRPGGDLAVLLAMCHVMIDEQLYDASFVERYTSGFEQLAQAVKETTPEWAAA CCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHC QADVPADVIVRVTRELAACAPHAIVSPGHRATFSQEEIDMRRMIFTLNVLLGNIEREGGL CCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC YQKKNASVYNKLAGEKVAPTLAKLNIKNMPKPTAQRIDLVAPQFKYIAAGGGVVQSIIDA CCCCCCHHHHHHCCCHHCCHHHHCCCCCCCCCHHHHHHHCCCCEEEEECCCHHHHHHHHH VLTQKPYPVKAWIMSRHNPFQTVTCRSDLVKTVEQLDLVVSCDVYLSESAAYADYLLPEC HHCCCCCCEEEEEECCCCCCEEEECHHHHHHHHHHHCEEEEECEEECCCHHHHHHHCCCC TYLERDEEVSDMSGLHPAYALRQQVVEPIGEARPSWQIWKELGEQLGLGQYYPWQDMQTR CCCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCH QLYQLNGDHALAKELRQKGYLEWGVPLLLREPESVRQFTARYPGAIATDSDNTYGEQLRF HHEEECCCHHHHHHHHHCCCEECCCCEEEECCHHHHHHHHHCCCCEECCCCCCCCCCEEE KSPSGKIELYSATLEELLPGYGVPRVRDFALKKENELYFIQGKVAVHTNGATQYVPLLSE ECCCCCEEEHHHHHHHHCCCCCCCHHHHHHHCCCCCEEEEEEEEEEEECCCHHHHHHHHH LMWDNAVWVHPQTAQEKGIKTGDEIWLENATGKEKGKALVTPGIRPDTLFVYMGFGAKAG HHHCCEEEECCCHHHHCCCCCCCCEEEECCCCCCCCCEEECCCCCCCEEEEEECCCCCCC AKTAATTHGIHCGNLLPHVTSPVSGTVVHTAGVTLSRA CCCCHHCCCCCCCCCCCCCCCCCCCEEEEECCEEEECC >Mature Secondary Structure SISRRSFLQGVGIGCSACALGAFPPGALARNPIAGINGKTTLTPSLCEMCSFRCPIQAQ CCCHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEECHHHHHHHCCCCCEEEE VVNNKTVFIQGNPSAPQQGTRICARGGSGVSLVNDPQRIVKPMKRTGPRGDGEWQVISWQ EECCEEEEEECCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEHH QAYQEIAAKMNAIKVQHGPETVAFSSKSGSLSSHLFHLATAFGSPNTFTHASTCPAGKAI HHHHHHHHHHHHEEEECCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH AAKVMMGGDLAMDIANTRYLVSFGHNLYEGIEVADTHELMTAQEKGAKMVSFDPRLSIFS HHHEEECCCEEEECCCCEEEEECCCHHHHCCCCCCHHHHHHHHHHCCEEEECCCCHHHHC SKADEWHAIRPGGDLAVLLAMCHVMIDEQLYDASFVERYTSGFEQLAQAVKETTPEWAAA CCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHC QADVPADVIVRVTRELAACAPHAIVSPGHRATFSQEEIDMRRMIFTLNVLLGNIEREGGL CCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC YQKKNASVYNKLAGEKVAPTLAKLNIKNMPKPTAQRIDLVAPQFKYIAAGGGVVQSIIDA CCCCCCHHHHHHCCCHHCCHHHHCCCCCCCCCHHHHHHHCCCCEEEEECCCHHHHHHHHH VLTQKPYPVKAWIMSRHNPFQTVTCRSDLVKTVEQLDLVVSCDVYLSESAAYADYLLPEC HHCCCCCCEEEEEECCCCCCEEEECHHHHHHHHHHHCEEEEECEEECCCHHHHHHHCCCC TYLERDEEVSDMSGLHPAYALRQQVVEPIGEARPSWQIWKELGEQLGLGQYYPWQDMQTR CCCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCH QLYQLNGDHALAKELRQKGYLEWGVPLLLREPESVRQFTARYPGAIATDSDNTYGEQLRF HHEEECCCHHHHHHHHHCCCEECCCCEEEECCHHHHHHHHHCCCCEECCCCCCCCCCEEE KSPSGKIELYSATLEELLPGYGVPRVRDFALKKENELYFIQGKVAVHTNGATQYVPLLSE ECCCCCEEEHHHHHHHHCCCCCCCHHHHHHHCCCCCEEEEEEEEEEEECCCHHHHHHHHH LMWDNAVWVHPQTAQEKGIKTGDEIWLENATGKEKGKALVTPGIRPDTLFVYMGFGAKAG HHHCCEEEECCCHHHHCCCCCCCCEEEECCCCCCCCCEEECCCCCCCEEEEEECCCCCCC AKTAATTHGIHCGNLLPHVTSPVSGTVVHTAGVTLSRA CCCCHHCCCCCCCCCCCCCCCCCCCEEEEECCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: May Bind 4Fe-4S Cluster. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7751291; 11677609; 7737516 [H]