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The map label for this gene is ymfN [H]

Identifier: 194736431

GI number: 194736431

Start: 2144286

End: 2146019

Strand: Reverse

Name: ymfN [H]

Synonym: SeSA_A2267

Alternate gene names: 194736431

Gene position: 2146019-2144286 (Counterclockwise)

Preceding gene: 194734572

Following gene: 194738012

Centisome position: 45.57

GC content: 54.61

Gene sequence:

>1734_bases
ATGAGCCGGAAATCTTACCCCAACGTAAATGCTGCCAATCAGTATGCCCGTGATGTCGTGCGCGGAAAGATTGTGGCCTG
CCAGTTTGTGATTCAGGCCTGCCAGCGCCATCTTGATGACCTGATGGCGGAAAAAAGTAAGTCGTTTCGTTACCGCTTCG
ACAAGGACCAGGCTGAACGGGCCGCGAAATTTATTCAGCTGTTGCCACACACCAAGGGGGAGTGGGCATTCAAACGGATG
CCCATCACGCTGGAGCCGTGGCAGCTCTTTGTGATCTGCTGCGCGTTTGGCTGGGTCAATAAAGGCTCCCGGCTGCGCCG
CTTCCGGGAGGTGTATACCGAAATCCCCCGTAAGAACGGCAAATCGGCAATCTCTGCCGGTGTTGCCCTGTATTGTTTTG
CCTGTGATAACGAGTTTGGCGCGGAAGTGTATTCCGGTGCCACGACAGAGAAACAGGCGTGGGAAGTCTTTCGCCCGGCG
CGACTGATGTGTAAACGCACACCCATGCTGACGGAAGCGTTCGGGATTGAGGTTAACGCCTCAAACATGAACCGTCCGGA
GGATGGCGCGCGGTTTGAACCGCTGATCGGTAACCCCGGTGATGGTTCATCACCCCACTGTGCTGTGGTGGATGAATATC
ACGAGCATGCCACAGATGCACTTTACACCACGATGCTTACCGGGATGGGCGCGCGACGTCAGCCACTGATGTGGGCCATC
ACCACCGCCGGGTACAACATTGAGGGGCCGTGCTACGACAAGCGGCGGGAAGTCATCGAGATGCTCAACGGCTCGGTGCC
TAACGATGAACTGTTCGGGATCATCTATACCGTTGATGAAGGTGACGACTGGACCGACCCGCAGGTGCTGGAAAAAGCCA
ATCCAAATATTGGCGTGTCGGTTTATCGCGAATTTTTGTTAAGTCAGCAGCAGCGTGCGAAAAATAACGCCCGTCTGGCA
AACGTCTTTAAAACAAAACACCTCAATATCTGGGTGTCGGCGCGTTCGGCGTATTTCAACCTGGTGAGCTGGCAGAGCTG
CGAGGATAAATCACTGACCCTTGAGCAGTTCGAGGGGCAGCCGTGCATTCTGGCCTTTGACCTGGCGCGTAAGCTGGATA
TGAACAGCATGGCGCGACTTTATACCCGCGAGATTGACGGTAAAACGCATTACTACAGTGTGGCCCCGCGTTTCTGGGTA
CCGTATGACACGGTGTACAGCGTCGAGAAAAATGAAGATCGCCGGACAGCCGAACGCTTTCAGAAATGGGTGGAAATGGG
CGTTCTGACTGTTACCGCTGGTGCGGAGGTGGATTATCGCTACATCCTCGAGGAGGCCAAAGCGGCGAACAAAATCAGCC
CGGTCAGTGAGTCACCCATCGACCCCTTCGGGGCGACCGGGCTGTCGCATGACCTTGCTGATGAAGACCTGAACCCCATC
ACCATCATTCAGAACTACACCAACATGTCCGATCCGATGAAAGAGCTGGAAGCGGCGATTGAATCGGGGCGCTTTCATCA
TGACGGCAATCCCATCATGACCTGGTGTATCGGCAACGTAGTCGGCAAAACCATTCCGGGTAACGATGATGTGGTGAAGC
CTGTCAAGGAGCAGGCGGAAAATAAAATCGATGGTGCAGTTGCACTGATTATGGCGGTTGGCAGAGCCATGCTGTACGAG
AAAGAAGACACGCTGTCTGACCACATTGAGTCCTACGGGATCCGCTCGCTTTAA

Upstream 100 bases:

>100_bases
CGGGTGCAATGCTCGGACTCGACCCCAGCAGCCGCCAGCGTCTGATTGGCCTGGCGGGGCAGAAGAAAGCCACTAACCCG
TTTCTGAAAATCATCGAGTC

Downstream 100 bases:

>100_bases
CTGAGGTAATTATGATCATGCTGATTCTCGCGCCTCTGGTGGGCGTGCTGGGTGCGCTTTTGCTGGCGTATGGTGCCTGG
CTGATTTATCCCCCGGCGGG

Product: putative phage terminase, large subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 577; Mature: 576

Protein sequence:

>577_residues
MSRKSYPNVNAANQYARDVVRGKIVACQFVIQACQRHLDDLMAEKSKSFRYRFDKDQAERAAKFIQLLPHTKGEWAFKRM
PITLEPWQLFVICCAFGWVNKGSRLRRFREVYTEIPRKNGKSAISAGVALYCFACDNEFGAEVYSGATTEKQAWEVFRPA
RLMCKRTPMLTEAFGIEVNASNMNRPEDGARFEPLIGNPGDGSSPHCAVVDEYHEHATDALYTTMLTGMGARRQPLMWAI
TTAGYNIEGPCYDKRREVIEMLNGSVPNDELFGIIYTVDEGDDWTDPQVLEKANPNIGVSVYREFLLSQQQRAKNNARLA
NVFKTKHLNIWVSARSAYFNLVSWQSCEDKSLTLEQFEGQPCILAFDLARKLDMNSMARLYTREIDGKTHYYSVAPRFWV
PYDTVYSVEKNEDRRTAERFQKWVEMGVLTVTAGAEVDYRYILEEAKAANKISPVSESPIDPFGATGLSHDLADEDLNPI
TIIQNYTNMSDPMKELEAAIESGRFHHDGNPIMTWCIGNVVGKTIPGNDDVVKPVKEQAENKIDGAVALIMAVGRAMLYE
KEDTLSDHIESYGIRSL

Sequences:

>Translated_577_residues
MSRKSYPNVNAANQYARDVVRGKIVACQFVIQACQRHLDDLMAEKSKSFRYRFDKDQAERAAKFIQLLPHTKGEWAFKRM
PITLEPWQLFVICCAFGWVNKGSRLRRFREVYTEIPRKNGKSAISAGVALYCFACDNEFGAEVYSGATTEKQAWEVFRPA
RLMCKRTPMLTEAFGIEVNASNMNRPEDGARFEPLIGNPGDGSSPHCAVVDEYHEHATDALYTTMLTGMGARRQPLMWAI
TTAGYNIEGPCYDKRREVIEMLNGSVPNDELFGIIYTVDEGDDWTDPQVLEKANPNIGVSVYREFLLSQQQRAKNNARLA
NVFKTKHLNIWVSARSAYFNLVSWQSCEDKSLTLEQFEGQPCILAFDLARKLDMNSMARLYTREIDGKTHYYSVAPRFWV
PYDTVYSVEKNEDRRTAERFQKWVEMGVLTVTAGAEVDYRYILEEAKAANKISPVSESPIDPFGATGLSHDLADEDLNPI
TIIQNYTNMSDPMKELEAAIESGRFHHDGNPIMTWCIGNVVGKTIPGNDDVVKPVKEQAENKIDGAVALIMAVGRAMLYE
KEDTLSDHIESYGIRSL
>Mature_576_residues
SRKSYPNVNAANQYARDVVRGKIVACQFVIQACQRHLDDLMAEKSKSFRYRFDKDQAERAAKFIQLLPHTKGEWAFKRMP
ITLEPWQLFVICCAFGWVNKGSRLRRFREVYTEIPRKNGKSAISAGVALYCFACDNEFGAEVYSGATTEKQAWEVFRPAR
LMCKRTPMLTEAFGIEVNASNMNRPEDGARFEPLIGNPGDGSSPHCAVVDEYHEHATDALYTTMLTGMGARRQPLMWAIT
TAGYNIEGPCYDKRREVIEMLNGSVPNDELFGIIYTVDEGDDWTDPQVLEKANPNIGVSVYREFLLSQQQRAKNNARLAN
VFKTKHLNIWVSARSAYFNLVSWQSCEDKSLTLEQFEGQPCILAFDLARKLDMNSMARLYTREIDGKTHYYSVAPRFWVP
YDTVYSVEKNEDRRTAERFQKWVEMGVLTVTAGAEVDYRYILEEAKAANKISPVSESPIDPFGATGLSHDLADEDLNPIT
IIQNYTNMSDPMKELEAAIESGRFHHDGNPIMTWCIGNVVGKTIPGNDDVVKPVKEQAENKIDGAVALIMAVGRAMLYEK
EDTLSDHIESYGIRSL

Specific function: Unknown

COG id: COG4626

COG function: function code R; Phage terminase-like protein, large subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage terminase family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000524
- InterPro:   IPR005021
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00392 GntR; PF03354 Terminase_1 [H]

EC number: NA

Molecular weight: Translated: 65322; Mature: 65191

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRKSYPNVNAANQYARDVVRGKIVACQFVIQACQRHLDDLMAEKSKSFRYRFDKDQAER
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHH
AAKFIQLLPHTKGEWAFKRMPITLEPWQLFVICCAFGWVNKGSRLRRFREVYTEIPRKNG
HHHHHHHHCCCCCCCEEEECCEEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCC
KSAISAGVALYCFACDNEFGAEVYSGATTEKQAWEVFRPARLMCKRTPMLTEAFGIEVNA
CHHHHCCEEEEEEEECCCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCEEEC
SNMNRPEDGARFEPLIGNPGDGSSPHCAVVDEYHEHATDALYTTMLTGMGARRQPLMWAI
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
TTAGYNIEGPCYDKRREVIEMLNGSVPNDELFGIIYTVDEGDDWTDPQVLEKANPNIGVS
EECCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCHHHHHHCCCCCCHH
VYREFLLSQQQRAKNNARLANVFKTKHLNIWVSARSAYFNLVSWQSCEDKSLTLEQFEGQ
HHHHHHHHHHHHHHCCCHHHHHHHEEEEEEEEEECHHHHHHHCCCCCCCCCCCHHHCCCC
PCILAFDLARKLDMNSMARLYTREIDGKTHYYSVAPRFWVPYDTVYSVEKNEDRRTAERF
CEEEEEHHHHHCCHHHHHHHHHHHCCCCEEEEEECCCEECCCHHEEECCCCCHHHHHHHH
QKWVEMGVLTVTAGAEVDYRYILEEAKAANKISPVSESPIDPFGATGLSHDLADEDLNPI
HHHHHHCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
TIIQNYTNMSDPMKELEAAIESGRFHHDGNPIMTWCIGNVVGKTIPGNDDVVKPVKEQAE
EEEECCCCCCHHHHHHHHHHHCCCEEECCCCEEEEEHHHHHCCCCCCCCHHHHHHHHHHH
NKIDGAVALIMAVGRAMLYEKEDTLSDHIESYGIRSL
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SRKSYPNVNAANQYARDVVRGKIVACQFVIQACQRHLDDLMAEKSKSFRYRFDKDQAER
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHH
AAKFIQLLPHTKGEWAFKRMPITLEPWQLFVICCAFGWVNKGSRLRRFREVYTEIPRKNG
HHHHHHHHCCCCCCCEEEECCEEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCC
KSAISAGVALYCFACDNEFGAEVYSGATTEKQAWEVFRPARLMCKRTPMLTEAFGIEVNA
CHHHHCCEEEEEEEECCCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCEEEC
SNMNRPEDGARFEPLIGNPGDGSSPHCAVVDEYHEHATDALYTTMLTGMGARRQPLMWAI
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
TTAGYNIEGPCYDKRREVIEMLNGSVPNDELFGIIYTVDEGDDWTDPQVLEKANPNIGVS
EECCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCHHHHHHCCCCCCHH
VYREFLLSQQQRAKNNARLANVFKTKHLNIWVSARSAYFNLVSWQSCEDKSLTLEQFEGQ
HHHHHHHHHHHHHHCCCHHHHHHHEEEEEEEEEECHHHHHHHCCCCCCCCCCCHHHCCCC
PCILAFDLARKLDMNSMARLYTREIDGKTHYYSVAPRFWVPYDTVYSVEKNEDRRTAERF
CEEEEEHHHHHCCHHHHHHHHHHHCCCCEEEEEECCCEECCCHHEEECCCCCHHHHHHHH
QKWVEMGVLTVTAGAEVDYRYILEEAKAANKISPVSESPIDPFGATGLSHDLADEDLNPI
HHHHHHCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
TIIQNYTNMSDPMKELEAAIESGRFHHDGNPIMTWCIGNVVGKTIPGNDDVVKPVKEQAE
EEEECCCCCCHHHHHHHHHHHCCCEEECCCCEEEEEHHHHHCCCCCCCCHHHHHHHHHHH
NKIDGAVALIMAVGRAMLYEKEDTLSDHIESYGIRSL
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]