Definition Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome.
Accession NC_011094
Length 4,709,075

Click here to switch to the map view.

The map label for this gene is ydfP [C]

Identifier: 194736287

GI number: 194736287

Start: 4330106

End: 4330648

Strand: Direct

Name: ydfP [C]

Synonym: SeSA_A4458

Alternate gene names: 194736287

Gene position: 4330106-4330648 (Clockwise)

Preceding gene: 194735401

Following gene: 194737267

Centisome position: 91.95

GC content: 52.67

Gene sequence:

>543_bases
ATGAATCTGTTACCTGTATTGCTTAAAAAATTCTGGAAGCCATTAGCAGAAATACTGCTGGTGGCTTTTTTGTTATGTGC
TGGTGCGTACTGGTGTTATTCACGAGGTTATCAGAAGGCGGATACATCATGGAAATTCCAGTGGGCGCAACGAGACCTTA
CTGATGCGACCACCGCATTGCAGCGTGAAGTAACCGAAAGAGCGAAAGAGCAGCGTCGCCAGAACGCCGCAGATGAAGAA
CGGAAAAGAGCTGATGAAGAACTGGCAAAAATACAGGCCGATGCTGATGCTGCTGAGCGTGCTCGCGGTGGGCTGCAACA
GCAGCTCGCGGCAGTACAACGGCAACTTGCAGGAAGTGAAACCGGCAGGCTTTCCGCTCTTGCCGCAGCAAGCCAGGCAA
AAGCCGAGACCGGAATACTGCTCGCCAAGTTGCTTGGCGAAGCTGACGATCTGGCGGGAAAGTTCGCAAAAGAGGCTGAT
GAGCGTTATGTCGCCGGAAGCACATGCGAACGTACCTGGGACAAAGTGACCGGGCAGAACTGA

Upstream 100 bases:

>100_bases
ACTCCGGCGACCTGGTACGCGTTACGCAGATCATTAACGGAGGGCAGAACGGCATCGGTGACAGGCGAGAGCGCTTTGAA
AAAGCAAAATCGGTGCTGGT

Downstream 100 bases:

>100_bases
AACCTGATAACAAGGAAAATTAATGAAGGCAAAATTATTCGTACTGGCCCTGGTATGTGTGTCCCTCGCCGGGTGTACAA
CGCTTTATTATCGGTAATGA

Product: protein gp55

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MNLLPVLLKKFWKPLAEILLVAFLLCAGAYWCYSRGYQKADTSWKFQWAQRDLTDATTALQREVTERAKEQRRQNAADEE
RKRADEELAKIQADADAAERARGGLQQQLAAVQRQLAGSETGRLSALAAASQAKAETGILLAKLLGEADDLAGKFAKEAD
ERYVAGSTCERTWDKVTGQN

Sequences:

>Translated_180_residues
MNLLPVLLKKFWKPLAEILLVAFLLCAGAYWCYSRGYQKADTSWKFQWAQRDLTDATTALQREVTERAKEQRRQNAADEE
RKRADEELAKIQADADAAERARGGLQQQLAAVQRQLAGSETGRLSALAAASQAKAETGILLAKLLGEADDLAGKFAKEAD
ERYVAGSTCERTWDKVTGQN
>Mature_180_residues
MNLLPVLLKKFWKPLAEILLVAFLLCAGAYWCYSRGYQKADTSWKFQWAQRDLTDATTALQREVTERAKEQRRQNAADEE
RKRADEELAKIQADADAAERARGGLQQQLAAVQRQLAGSETGRLSALAAASQAKAETGILLAKLLGEADDLAGKFAKEAD
ERYVAGSTCERTWDKVTGQN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19948; Mature: 19948

Theoretical pI: Translated: 8.02; Mature: 8.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLLPVLLKKFWKPLAEILLVAFLLCAGAYWCYSRGYQKADTSWKFQWAQRDLTDATTAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
QREVTERAKEQRRQNAADEERKRADEELAKIQADADAAERARGGLQQQLAAVQRQLAGSE
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHCCC
TGRLSALAAASQAKAETGILLAKLLGEADDLAGKFAKEADERYVAGSTCERTWDKVTGQN
CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MNLLPVLLKKFWKPLAEILLVAFLLCAGAYWCYSRGYQKADTSWKFQWAQRDLTDATTAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
QREVTERAKEQRRQNAADEERKRADEELAKIQADADAAERARGGLQQQLAAVQRQLAGSE
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHCCC
TGRLSALAAASQAKAETGILLAKLLGEADDLAGKFAKEADERYVAGSTCERTWDKVTGQN
CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA