| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
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The map label for this gene is yeiT [H]
Identifier: 194736184
GI number: 194736184
Start: 2301859
End: 2303100
Strand: Direct
Name: yeiT [H]
Synonym: SeSA_A2425
Alternate gene names: 194736184
Gene position: 2301859-2303100 (Clockwise)
Preceding gene: 194737953
Following gene: 194736993
Centisome position: 48.88
GC content: 50.64
Gene sequence:
>1242_bases ATGCCGCAACAAAATTATCTGGATGAACTCACGCCTGGTTTTACGCCATTACTGGCAATAAAAGAGGCTTCCCGTTGTTT ATTATGTCACGATGCGCCCTGTAGTCAGGCTTGCCCGGCGCAAACCGATCCGGGGAAATTTATTCGTTCTATTTACTTTC GCAATTTTAAAGGCGCAGCGGAAACTATCCGGGAAAATAACGCGCTTGGCGCCGTCTGCGCCAGAGTCTGTCCGACGGAA AAATTATGCCAGCGCGGATGTACACGTTCCGGAATAGATAAACCTATTGATATTGCACGCCTGCAACGTTTTATTACCGA TTTTGAACAGCAGACTGCCATGCAGATTTATCAGCCCGGGAGTAAAACACGCGGAAAAGTCGCGATTATTGGCGCGGGTC CGGCAGGTTTGCAGGCAAGCGTGACGCTCACGCATTTAGGCTATGACGTCACCATTTACGAAAAACAGCCGCAGCCCGGC GGATGGCTGCGTCACGGCATCCCGGCATTTCGTCTGCCGCAAAGCGTACTCGATCAGGAAATTGCCCGCATTGTAGAAAT GGGCGTCAATATTAAATGTAATTGTGACGTGGGCGGGTCGCTATCGCTTGCGCAACTCAAAGCCGAATATCGCGCCGTGC TGATGACCATCGGGATGTCCTATGGATCTGATTTACCGTTATTTGAGCAAGCCAGTCACGTAGAGATTGCCGTTGATTTT TTACAGCGCGCCCGTCAGGCCGACGGCGATATTAGCGTTCCGCGTAGCGCATTAATTATTGGCGGCGGCGACGTAGCGAT GGATGTCGCCAGTACGTTAAAAATTCTCGGCTGTCCTTCCGTCACCTGCGTGGCGCGGGAAGAATTAGCCGAATTCCCCG CCAGCGAAAAAGAATTTACCAGCACGCAGGCATTAGGCGTATCGATTATTGATGGTTTTACGCCTGTCGCCGTCAGCGGA AATAAAGTGACCTTCCACCATGTACGCCACTCAGGAGAACTGACGCTGGAAGCGGAAAATATTATTTTGGCCGTGGGTCA GCACGCGCGACTGGATACCTTTGCGGAGATAAAAGCGCAGCATAATATTATCGACACGCACAATTATCAAACCGACGACC CGGCGATCTTTGCCGCTGGCGATATTGTTAAAGGCGATAAGACCGTCGTTTATGCGGTAAAAACCGGAAAAGAAGCCGCT CAGGCTATTCATCATTATTTAGAGGAGGCCTGCTCATGTTAA
Upstream 100 bases:
>100_bases ATACCCTCTTTTCAATGCTTAGGCTGGCGGTAGATTTTAGATCATTAAAACGCGTTATTTGCGTTTCGCCTTAATTTATT CAAGCATTAAGGAAGATTAT
Downstream 100 bases:
>100_bases CAAAAGATTTGTCTGTTACCTTTTGCGGCGTTAAGTTTCCCAATCCGTTTTGTCTTTCTTCTTCTCCGGTAGGCAATTGT TATGAGATGTGCGCCAAAGC
Product: putative oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 413; Mature: 412
Protein sequence:
>413_residues MPQQNYLDELTPGFTPLLAIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCPTE KLCQRGCTRSGIDKPIDIARLQRFITDFEQQTAMQIYQPGSKTRGKVAIIGAGPAGLQASVTLTHLGYDVTIYEKQPQPG GWLRHGIPAFRLPQSVLDQEIARIVEMGVNIKCNCDVGGSLSLAQLKAEYRAVLMTIGMSYGSDLPLFEQASHVEIAVDF LQRARQADGDISVPRSALIIGGGDVAMDVASTLKILGCPSVTCVAREELAEFPASEKEFTSTQALGVSIIDGFTPVAVSG NKVTFHHVRHSGELTLEAENIILAVGQHARLDTFAEIKAQHNIIDTHNYQTDDPAIFAAGDIVKGDKTVVYAVKTGKEAA QAIHHYLEEACSC
Sequences:
>Translated_413_residues MPQQNYLDELTPGFTPLLAIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCPTE KLCQRGCTRSGIDKPIDIARLQRFITDFEQQTAMQIYQPGSKTRGKVAIIGAGPAGLQASVTLTHLGYDVTIYEKQPQPG GWLRHGIPAFRLPQSVLDQEIARIVEMGVNIKCNCDVGGSLSLAQLKAEYRAVLMTIGMSYGSDLPLFEQASHVEIAVDF LQRARQADGDISVPRSALIIGGGDVAMDVASTLKILGCPSVTCVAREELAEFPASEKEFTSTQALGVSIIDGFTPVAVSG NKVTFHHVRHSGELTLEAENIILAVGQHARLDTFAEIKAQHNIIDTHNYQTDDPAIFAAGDIVKGDKTVVYAVKTGKEAA QAIHHYLEEACSC >Mature_412_residues PQQNYLDELTPGFTPLLAIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAAETIRENNALGAVCARVCPTEK LCQRGCTRSGIDKPIDIARLQRFITDFEQQTAMQIYQPGSKTRGKVAIIGAGPAGLQASVTLTHLGYDVTIYEKQPQPGG WLRHGIPAFRLPQSVLDQEIARIVEMGVNIKCNCDVGGSLSLAQLKAEYRAVLMTIGMSYGSDLPLFEQASHVEIAVDFL QRARQADGDISVPRSALIIGGGDVAMDVASTLKILGCPSVTCVAREELAEFPASEKEFTSTQALGVSIIDGFTPVAVSGN KVTFHHVRHSGELTLEAENIILAVGQHARLDTFAEIKAQHNIIDTHNYQTDDPAIFAAGDIVKGDKTVVYAVKTGKEAAQ AIHHYLEEACSC
Specific function: Unknown
COG id: COG0493
COG function: function code ER; NADPH-dependent glutamate synthase beta chain and related oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli glutamate synthase [NADPH] small chain (GltD) and to E.coli AegA [H]
Homologues:
Organism=Homo sapiens, GI119943098, Length=437, Percent_Identity=30.4347826086957, Blast_Score=174, Evalue=2e-43, Organism=Homo sapiens, GI237757300, Length=90, Percent_Identity=46.6666666666667, Blast_Score=86, Evalue=6e-17, Organism=Escherichia coli, GI1788468, Length=413, Percent_Identity=83.2929782082325, Blast_Score=712, Evalue=0.0, Organism=Escherichia coli, GI1788811, Length=450, Percent_Identity=31.3333333333333, Blast_Score=192, Evalue=2e-50, Organism=Escherichia coli, GI1789606, Length=442, Percent_Identity=30.7692307692308, Blast_Score=177, Evalue=2e-45, Organism=Escherichia coli, GI87082180, Length=451, Percent_Identity=30.5986696230599, Blast_Score=171, Evalue=1e-43, Organism=Escherichia coli, GI1789243, Length=399, Percent_Identity=27.8195488721804, Blast_Score=128, Evalue=5e-31, Organism=Caenorhabditis elegans, GI71984108, Length=443, Percent_Identity=31.6027088036117, Blast_Score=161, Evalue=5e-40, Organism=Caenorhabditis elegans, GI17570289, Length=446, Percent_Identity=27.3542600896861, Blast_Score=145, Evalue=5e-35, Organism=Saccharomyces cerevisiae, GI6320030, Length=463, Percent_Identity=23.7580993520518, Blast_Score=128, Evalue=2e-30, Organism=Drosophila melanogaster, GI24640763, Length=434, Percent_Identity=29.4930875576037, Blast_Score=149, Evalue=3e-36, Organism=Drosophila melanogaster, GI18858217, Length=434, Percent_Identity=29.4930875576037, Blast_Score=149, Evalue=3e-36, Organism=Drosophila melanogaster, GI24665547, Length=444, Percent_Identity=28.1531531531532, Blast_Score=139, Evalue=2e-33, Organism=Drosophila melanogaster, GI24665543, Length=444, Percent_Identity=28.1531531531532, Blast_Score=139, Evalue=2e-33, Organism=Drosophila melanogaster, GI28574881, Length=444, Percent_Identity=28.1531531531532, Blast_Score=139, Evalue=3e-33, Organism=Drosophila melanogaster, GI24665539, Length=444, Percent_Identity=28.1531531531532, Blast_Score=139, Evalue=3e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013027 - InterPro: IPR012285 - InterPro: IPR009051 - InterPro: IPR016040 - InterPro: IPR001327 - InterPro: IPR000103 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]
EC number: NA
Molecular weight: Translated: 44655; Mature: 44524
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQQNYLDELTPGFTPLLAIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAA CCCHHHHHHHCCCCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCHHH ETIRENNALGAVCARVCPTEKLCQRGCTRSGIDKPIDIARLQRFITDFEQQTAMQIYQPG HHHHCCCCHHHHHHHHCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC SKTRGKVAIIGAGPAGLQASVTLTHLGYDVTIYEKQPQPGGWLRHGIPAFRLPQSVLDQE CCCCCEEEEEECCCCCCEEEEEEEEECEEEEEEECCCCCCCHHHHCCCHHCCCHHHHHHH IARIVEMGVNIKCNCDVGGSLSLAQLKAEYRAVLMTIGMSYGSDLPLFEQASHVEIAVDF HHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHH LQRARQADGDISVPRSALIIGGGDVAMDVASTLKILGCPSVTCVAREELAEFPASEKEFT HHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHH STQALGVSIIDGFTPVAVSGNKVTFHHVRHSGELTLEAENIILAVGQHARLDTFAEIKAQ HHHHCCEEEECCCCCEEECCCEEEEEEEECCCCEEEEECEEEEEECCCCCCHHHHHHHHH HNIIDTHNYQTDDPAIFAAGDIVKGDKTVVYAVKTGKEAAQAIHHYLEEACSC CCEEECCCCCCCCCEEEEECCEECCCCEEEEEEECCHHHHHHHHHHHHHHHCC >Mature Secondary Structure PQQNYLDELTPGFTPLLAIKEASRCLLCHDAPCSQACPAQTDPGKFIRSIYFRNFKGAA CCHHHHHHHCCCCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCHHH ETIRENNALGAVCARVCPTEKLCQRGCTRSGIDKPIDIARLQRFITDFEQQTAMQIYQPG HHHHCCCCHHHHHHHHCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC SKTRGKVAIIGAGPAGLQASVTLTHLGYDVTIYEKQPQPGGWLRHGIPAFRLPQSVLDQE CCCCCEEEEEECCCCCCEEEEEEEEECEEEEEEECCCCCCCHHHHCCCHHCCCHHHHHHH IARIVEMGVNIKCNCDVGGSLSLAQLKAEYRAVLMTIGMSYGSDLPLFEQASHVEIAVDF HHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHH LQRARQADGDISVPRSALIIGGGDVAMDVASTLKILGCPSVTCVAREELAEFPASEKEFT HHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHH STQALGVSIIDGFTPVAVSGNKVTFHHVRHSGELTLEAENIILAVGQHARLDTFAEIKAQ HHHHCCEEEECCCCCEEECCCEEEEEEEECCCCEEEEECEEEEEECCCCCCHHHHHHHHH HNIIDTHNYQTDDPAIFAAGDIVKGDKTVVYAVKTGKEAAQAIHHYLEEACSC CCEEECCCCCCCCCEEEEECCEECCCCEEEEEEECCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]