| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
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The map label for this gene is ydfU [H]
Identifier: 194736126
GI number: 194736126
Start: 4326126
End: 4327115
Strand: Direct
Name: ydfU [H]
Synonym: SeSA_A4451
Alternate gene names: 194736126
Gene position: 4326126-4327115 (Clockwise)
Preceding gene: 194734241
Following gene: 194737741
Centisome position: 91.87
GC content: 55.66
Gene sequence:
>990_bases GTGAGAGCGCTACTGACCCCTGAGATTGCCCCGCGTATGGGGATCGTATTGTTCAGACCCGGTTCAGAGCTGATGCCCCT GTTTATGCAGGGGCGTGTCCTGCTGGAGCCTGAGCCGGAACGTTATTCATCTTTTGCCAGTGGTGCCGTTCCGGCGGCAT CACAACCACTGGCGGATGATCCTGCCGTTCGGGCTGTGTTCCGCAATGAGGCGGTGATCCGTCGTGCTGGTGGCGTGGAA TGTCTTGAAAGCTGGTTACTTCGTGAAAAAGGCTGCCAGTGGCCTCATTCCGACTGGCACAGCGAGAACATGACCACAAT GCGACACGCTCCGGGCGCAATCCGTCTGTGCTGGCACTGCGATAACCAGCTGCGCGATCAGTTCACGGAACGGCTGGAAT CAATGGCAACGGATAACTGTGCCCGCTGGGTGTTGTCTGTTGTGCGTCGGGATCTCGGTTTTGATGACAGTCACGTTGTG ACAATGCCGGAACTGTGCTGGTGGCTGGTTCGTAATGATCTGGCGGATGCCTTACCGGAAAGCGCAGCCCGTAAGGCACT GAGATTACCGAAGCCTGTTGTGCAGGCGGCCACCCGGGAAAGTGACCTTGTACATTCGGTTCCTGCCACCAGCATCATCC AGGATAAAGCGAAAAAGGTGCTGGCGCTGAAAGTGGATCCGGAGTCGCCGGAGTCTTTTATGTTACGTCCAAAACGTCGC CGCTGGGTTAATGAAAAGTACACGCGCTGGGTTAAGACGCAGCCGTGTGCATGTTGTGGAAAGCCTGCTGATGATCCCCA CCACCTGATAGGTCACGGTCAGGGTGGAATGGGTACAAAAGCGCATGACCTCTTTGTGTTGCCTTTGTGCAGAAAGCATC ACGACGAGCTGCATGCGGATACCGTGGCATTTGAAGAGAAGTATGGCTCCCAGCTGGAGCTGATATTTCGTTTTATCGAT CGTGCGCTGGCAATAGGCGTACTGGCGTAA
Upstream 100 bases:
>100_bases ATCACCAGTCCGGCAAATCCGCGTGAGACGCAGCCGCATTTCTTCGAATCCCGATTCCCTGAGCTGTTAAAGCTGCTCGA TACCGTTCATTGAGGTGACC
Downstream 100 bases:
>100_bases GTGGAGAACGAGCATGAACCTTGAAGCCTTACCAAAATATTACTCCCCAAAATCTCCAAAATTGAGTGATGACGCACCGG CGACAGGCTCGGGTGGTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MRALLTPEIAPRMGIVLFRPGSELMPLFMQGRVLLEPEPERYSSFASGAVPAASQPLADDPAVRAVFRNEAVIRRAGGVE CLESWLLREKGCQWPHSDWHSENMTTMRHAPGAIRLCWHCDNQLRDQFTERLESMATDNCARWVLSVVRRDLGFDDSHVV TMPELCWWLVRNDLADALPESAARKALRLPKPVVQAATRESDLVHSVPATSIIQDKAKKVLALKVDPESPESFMLRPKRR RWVNEKYTRWVKTQPCACCGKPADDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHDELHADTVAFEEKYGSQLELIFRFID RALAIGVLA
Sequences:
>Translated_329_residues MRALLTPEIAPRMGIVLFRPGSELMPLFMQGRVLLEPEPERYSSFASGAVPAASQPLADDPAVRAVFRNEAVIRRAGGVE CLESWLLREKGCQWPHSDWHSENMTTMRHAPGAIRLCWHCDNQLRDQFTERLESMATDNCARWVLSVVRRDLGFDDSHVV TMPELCWWLVRNDLADALPESAARKALRLPKPVVQAATRESDLVHSVPATSIIQDKAKKVLALKVDPESPESFMLRPKRR RWVNEKYTRWVKTQPCACCGKPADDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHDELHADTVAFEEKYGSQLELIFRFID RALAIGVLA >Mature_329_residues MRALLTPEIAPRMGIVLFRPGSELMPLFMQGRVLLEPEPERYSSFASGAVPAASQPLADDPAVRAVFRNEAVIRRAGGVE CLESWLLREKGCQWPHSDWHSENMTTMRHAPGAIRLCWHCDNQLRDQFTERLESMATDNCARWVLSVVRRDLGFDDSHVV TMPELCWWLVRNDLADALPESAARKALRLPKPVVQAATRESDLVHSVPATSIIQDKAKKVLALKVDPESPESFMLRPKRR RWVNEKYTRWVKTQPCACCGKPADDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHDELHADTVAFEEKYGSQLELIFRFID RALAIGVLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI226510943, Length=349, Percent_Identity=56.7335243553009, Blast_Score=402, Evalue=1e-113,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010373 - InterPro: IPR003615 [H]
Pfam domain/function: PF06147 DUF968 [H]
EC number: NA
Molecular weight: Translated: 37162; Mature: 37162
Theoretical pI: Translated: 7.76; Mature: 7.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRALLTPEIAPRMGIVLFRPGSELMPLFMQGRVLLEPEPERYSSFASGAVPAASQPLADD CCCCCCCCCCCCCCEEEECCCCHHHHHHHCCEEEECCCHHHHHHHHCCCCCCCCCCCCCC PAVRAVFRNEAVIRRAGGVECLESWLLREKGCQWPHSDWHSENMTTMRHAPGAIRLCWHC HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCEEEEECC DNQLRDQFTERLESMATDNCARWVLSVVRRDLGFDDSHVVTMPELCWWLVRNDLADALPE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHH SAARKALRLPKPVVQAATRESDLVHSVPATSIIQDKAKKVLALKVDPESPESFMLRPKRR HHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEEEEECCCCCHHHHCCCHHH RWVNEKYTRWVKTQPCACCGKPADDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHDELHAD HHHHHHHHHHHCCCCCHHCCCCCCCCCHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHH TVAFEEKYGSQLELIFRFIDRALAIGVLA HHHHHHHHCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRALLTPEIAPRMGIVLFRPGSELMPLFMQGRVLLEPEPERYSSFASGAVPAASQPLADD CCCCCCCCCCCCCCEEEECCCCHHHHHHHCCEEEECCCHHHHHHHHCCCCCCCCCCCCCC PAVRAVFRNEAVIRRAGGVECLESWLLREKGCQWPHSDWHSENMTTMRHAPGAIRLCWHC HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCEEEEECC DNQLRDQFTERLESMATDNCARWVLSVVRRDLGFDDSHVVTMPELCWWLVRNDLADALPE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHH SAARKALRLPKPVVQAATRESDLVHSVPATSIIQDKAKKVLALKVDPESPESFMLRPKRR HHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEEEEECCCCCHHHHCCCHHH RWVNEKYTRWVKTQPCACCGKPADDPHHLIGHGQGGMGTKAHDLFVLPLCRKHHDELHAD HHHHHHHHHHHCCCCCHHCCCCCCCCCHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHH TVAFEEKYGSQLELIFRFIDRALAIGVLA HHHHHHHHCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503 [H]