Click here to switch to the map view.

The map label for this gene is psiF [H]

Identifier: 194736123

GI number: 194736123

Start: 450565

End: 450885

Strand: Direct

Name: psiF [H]

Synonym: SeSA_A0439

Alternate gene names: 194736123

Gene position: 450565-450885 (Clockwise)

Preceding gene: 194735119

Following gene: 194734843

Centisome position: 9.57

GC content: 51.4

Gene sequence:

>321_bases
ATGAAAATAACATTACTGGTGACTTTACTTTTTGGCCTGGTCTTTTTAACCGCCGTCGGCGCAACCGAGAAACCGTTAAC
GCCGCAACAGCAGCGCATGACAACCTGTAATCAGCAGGCGACAGCGCAAGCGTTGAAAGGCGATGCGCGTAAAACCTACC
TTAGCGACTGCCTGAAAAACAGTAAGTCAGCCCCTGGCGAGAAAAGCCTGACGCCGCAACAGCAGAAAATGCGTGAATGC
AATGTTCAGGCGACGGAACAATCCCTGAAAGGCGATGACCGTAGCAAGTTTATGAGCGCCTGCCTGAAAAAAGCGGCGTA
G

Upstream 100 bases:

>100_bases
GGTGGTATTTTTGCCAGTAACAGCCAGACTTATATAAAGTCCCTGGGATATTTCCCAAAGGGACAACGTGTAATGTGTAC
ACTGACAAAAGGATGGTGCT

Downstream 100 bases:

>100_bases
TGCTATCGGGTGAGCCCTGAAAAACACTCACCCGAAATTTCATACTCCCTCCATGCGCTCTGTTTCTATAATTTGGGAAA
ATTGTTTCTAAATGTTCCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MKITLLVTLLFGLVFLTAVGATEKPLTPQQQRMTTCNQQATAQALKGDARKTYLSDCLKNSKSAPGEKSLTPQQQKMREC
NVQATEQSLKGDDRSKFMSACLKKAA

Sequences:

>Translated_106_residues
MKITLLVTLLFGLVFLTAVGATEKPLTPQQQRMTTCNQQATAQALKGDARKTYLSDCLKNSKSAPGEKSLTPQQQKMREC
NVQATEQSLKGDDRSKFMSACLKKAA
>Mature_106_residues
MKITLLVTLLFGLVFLTAVGATEKPLTPQQQRMTTCNQQATAQALKGDARKTYLSDCLKNSKSAPGEKSLTPQQQKMREC
NVQATEQSLKGDDRSKFMSACLKKAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081731, Length=106, Percent_Identity=91.5094339622642, Blast_Score=199, Evalue=4e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011690 [H]

Pfam domain/function: PF07769 PsiF_repeat [H]

EC number: NA

Molecular weight: Translated: 11610; Mature: 11610

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKITLLVTLLFGLVFLTAVGATEKPLTPQQQRMTTCNQQATAQALKGDARKTYLSDCLKN
CHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
SKSAPGEKSLTPQQQKMRECNVQATEQSLKGDDRSKFMSACLKKAA
CCCCCCCCCCCCHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MKITLLVTLLFGLVFLTAVGATEKPLTPQQQRMTTCNQQATAQALKGDARKTYLSDCLKN
CHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
SKSAPGEKSLTPQQQKMRECNVQATEQSLKGDDRSKFMSACLKKAA
CCCCCCCCCCCCHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]