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The map label for this gene is yccF [H]

Identifier: 194736086

GI number: 194736086

Start: 1124752

End: 1125195

Strand: Reverse

Name: yccF [H]

Synonym: SeSA_A1137

Alternate gene names: 194736086

Gene position: 1125195-1124752 (Counterclockwise)

Preceding gene: 194736848

Following gene: 194734798

Centisome position: 23.89

GC content: 51.8

Gene sequence:

>444_bases
ATGCGTACCGTTCTGAATATTTTAAACTTTGTACTGGGCGGCTTTGCCACTACGCTGGCCTGGCTGCTGGCGACGCTGGT
CAGTATTGTGCTTATTTTTACCCTGCCGTTGACCCGCTCCTGCTGGGAGATAACCAAACTGTCCCTGTTCCCTTACGGTA
ATGAAGCCATTCACGTTGACGAACTTAATCCGGCGGCGAAAAGCGTATTAATGAATACTGGCGGTACCTTGCTGAATATT
TTCTGGTTACTTTTTTTCGGCTGGTGGCTATGCCTGATGCACATTGCCTCCGGTATCGCGCAGTGTGTCACTATCATCGG
GATACCTGTCGGTATTGCGAACTTTAAAATTGCCGCGATTGCGCTTTGGCCTGTCGGTCGCCGCGTCGTCTCTGTAGAAA
CCGCTCGCGCCGCGCGAGAAGCTAACGCGCGCCGTTTTGAATGA

Upstream 100 bases:

>100_bases
GATGTGCTTATCAGTGTAACCGCCAGAGAAAACGTGCTCCAGTCTAAAAAAACGTTACAATTGCCCGCAGTGATAGAAAA
CCGGAATGAACTGAGGGTTT

Downstream 100 bases:

>100_bases
TCGGGACAAATAGCCTTTATGTTAAGTCCGTTGATTCGCCGTTATACCTGGAACAGTACCTGGCTGTATTACATCCGCAT
TTTTATCGCTCTGTGCGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MRTVLNILNFVLGGFATTLAWLLATLVSIVLIFTLPLTRSCWEITKLSLFPYGNEAIHVDELNPAAKSVLMNTGGTLLNI
FWLLFFGWWLCLMHIASGIAQCVTIIGIPVGIANFKIAAIALWPVGRRVVSVETARAAREANARRFE

Sequences:

>Translated_147_residues
MRTVLNILNFVLGGFATTLAWLLATLVSIVLIFTLPLTRSCWEITKLSLFPYGNEAIHVDELNPAAKSVLMNTGGTLLNI
FWLLFFGWWLCLMHIASGIAQCVTIIGIPVGIANFKIAAIALWPVGRRVVSVETARAAREANARRFE
>Mature_147_residues
MRTVLNILNFVLGGFATTLAWLLATLVSIVLIFTLPLTRSCWEITKLSLFPYGNEAIHVDELNPAAKSVLMNTGGTLLNI
FWLLFFGWWLCLMHIASGIAQCVTIIGIPVGIANFKIAAIALWPVGRRVVSVETARAAREANARRFE

Specific function: Unknown

COG id: COG3304

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787195, Length=134, Percent_Identity=92.5373134328358, Blast_Score=251, Evalue=1e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005185 [H]

Pfam domain/function: PF03733 DUF307 [H]

EC number: NA

Molecular weight: Translated: 16215; Mature: 16215

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTVLNILNFVLGGFATTLAWLLATLVSIVLIFTLPLTRSCWEITKLSLFPYGNEAIHVD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEC
ELNPAAKSVLMNTGGTLLNIFWLLFFGWWLCLMHIASGIAQCVTIIGIPVGIANFKIAAI
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHE
ALWPVGRRVVSVETARAAREANARRFE
EECCCCCHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MRTVLNILNFVLGGFATTLAWLLATLVSIVLIFTLPLTRSCWEITKLSLFPYGNEAIHVD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEC
ELNPAAKSVLMNTGGTLLNIFWLLFFGWWLCLMHIASGIAQCVTIIGIPVGIANFKIAAI
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHE
ALWPVGRRVVSVETARAAREANARRFE
EECCCCCHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 2542273; 7984428 [H]