Click here to switch to the map view.

The map label for this gene is mocR [H]

Identifier: 194735993

GI number: 194735993

Start: 2857058

End: 2858392

Strand: Reverse

Name: mocR [H]

Synonym: SeSA_A2950

Alternate gene names: 194735993

Gene position: 2858392-2857058 (Counterclockwise)

Preceding gene: 194738374

Following gene: 194736790

Centisome position: 60.7

GC content: 57.15

Gene sequence:

>1335_bases
ATGCCGCGCTATCAGCACATCGCTCGTCAGTTAAAAACGGCCATTGAGCAAGGAGAACTCGCGCCCGGAACGCGTTTGCC
TTCCAGCCGGACGTGGGCGCAGGAACTGGGCGTTTCTCGCGCCACGGTGGAAAATGCCTATGGCGAGCTGGTGGCGCAGG
GCTGGCTGGAGCGACGTGGCCAGGCAGGCACGTTTGTGAGCAACGCTCTACGGTTTGAGACGGCGCCGCCGATACCCGCT
GTTTTTGCCGGAGAAAGTCCGGAACCGAAACCCTTTCAGATGGGGTTACCGGCGCTGGATCTCTTTCCGCGCGAGAAGTG
GGCGCGAGTGATGGGGCGTCGGTTGCGCACGCAGACGCGCTTCGATCTGGCATTAGGCGACGTCTGCGGCGAGGCGATTT
TGCGCCAGGCGATAGTCGATTACCTGCGGGTTTCGCGTAGCATTGAATGCCTGCCGGAACAGGTATTTATTACCTCCGGA
TATGCGGATTCTATGCGGCTGATCCTGCGTACATTGTCTGTGCCGGGAGACAGCATGTGGGTGGAAGATCCCGGTTTTCC
GTTAATTCGCCCGGTGATAACGCAGGAGGGGATTACGCTGGCGCCGATTCCGGTCGATGCCGATGGGCTGAATGTCGCGG
CGGGGATGCGGGATTGCCCGCAGGGGCGCTTTGCATTGGTGACGCCCGCCCACCAAAGTCCGTTGGGGGTAGCGCTGTCG
TTAACTCGCCGACGGCAACTTCTGGCATGGGCGGCGAATGTGCAGGCCTGGATTATTGAAGATGACTACGACAGCGAATT
TCGTTATCACGGTAAACCGCTTCCGCCGCTCAAGAGTCTGGATGCCCCGCAGCGAGTGATTTACGCCGGAACGTTCAGTA
AGTCGCTCTTCCCGGCATTACGTACCGCCTGGCTGGTGGTACCGATAAAGCAGATTGAGCATTTCCGCCAGCAGGCGTCG
CTGATGCCCTGTAGCGTACCGTTGTTATGGCAGCACACGTTGGCTGATTTTATCCGTGATGGCCATTTCTGGCGACATCT
GAAAAAGATGCGTCAACATTATGCTCAGCGACGGTTATGGATTGAAGAGGCGCTGGCGGAACAGGGATTTGTTGTGACAT
TACAGAAAGGCGGTATTCAATTGGTTATTGAGGTTGAAGGCGATGATAAAGCGCAGGTAGCGAAAGCGAATCAGGCCGGA
CTGGCGGTACAGGCGCTAAGCCGTTGGCGAGTGGTTTCATCAGGAAAGGGGGGCATTTTACTGTCATTTACCAATATTAC
TTCCGCTGGCATGGCGAAACAGGTCGCATGGCAGCTTCGACAGGCGATACAGTAA

Upstream 100 bases:

>100_bases
TAACGTCGTCATCATGTGTCTCCTCGTGTTGATGACGAGCACTGTAGCACTATAATGGTCTGTAAAAGAGAGCCATATTT
TTACAGAAAAAGCAGACCAT

Downstream 100 bases:

>100_bases
CCGTTTCGCCGAATGGCGCGACCTGGGCCTGCGGCAATGATGCAGGCCCAATAAAGTATGTCGCCATCCGGCAGCGCACG
TCGTTAGCGACGCAGGCTGA

Product: transcriptional regulator, GntR family with aminotransferase domain

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 444; Mature: 443

Protein sequence:

>444_residues
MPRYQHIARQLKTAIEQGELAPGTRLPSSRTWAQELGVSRATVENAYGELVAQGWLERRGQAGTFVSNALRFETAPPIPA
VFAGESPEPKPFQMGLPALDLFPREKWARVMGRRLRTQTRFDLALGDVCGEAILRQAIVDYLRVSRSIECLPEQVFITSG
YADSMRLILRTLSVPGDSMWVEDPGFPLIRPVITQEGITLAPIPVDADGLNVAAGMRDCPQGRFALVTPAHQSPLGVALS
LTRRRQLLAWAANVQAWIIEDDYDSEFRYHGKPLPPLKSLDAPQRVIYAGTFSKSLFPALRTAWLVVPIKQIEHFRQQAS
LMPCSVPLLWQHTLADFIRDGHFWRHLKKMRQHYAQRRLWIEEALAEQGFVVTLQKGGIQLVIEVEGDDKAQVAKANQAG
LAVQALSRWRVVSSGKGGILLSFTNITSAGMAKQVAWQLRQAIQ

Sequences:

>Translated_444_residues
MPRYQHIARQLKTAIEQGELAPGTRLPSSRTWAQELGVSRATVENAYGELVAQGWLERRGQAGTFVSNALRFETAPPIPA
VFAGESPEPKPFQMGLPALDLFPREKWARVMGRRLRTQTRFDLALGDVCGEAILRQAIVDYLRVSRSIECLPEQVFITSG
YADSMRLILRTLSVPGDSMWVEDPGFPLIRPVITQEGITLAPIPVDADGLNVAAGMRDCPQGRFALVTPAHQSPLGVALS
LTRRRQLLAWAANVQAWIIEDDYDSEFRYHGKPLPPLKSLDAPQRVIYAGTFSKSLFPALRTAWLVVPIKQIEHFRQQAS
LMPCSVPLLWQHTLADFIRDGHFWRHLKKMRQHYAQRRLWIEEALAEQGFVVTLQKGGIQLVIEVEGDDKAQVAKANQAG
LAVQALSRWRVVSSGKGGILLSFTNITSAGMAKQVAWQLRQAIQ
>Mature_443_residues
PRYQHIARQLKTAIEQGELAPGTRLPSSRTWAQELGVSRATVENAYGELVAQGWLERRGQAGTFVSNALRFETAPPIPAV
FAGESPEPKPFQMGLPALDLFPREKWARVMGRRLRTQTRFDLALGDVCGEAILRQAIVDYLRVSRSIECLPEQVFITSGY
ADSMRLILRTLSVPGDSMWVEDPGFPLIRPVITQEGITLAPIPVDADGLNVAAGMRDCPQGRFALVTPAHQSPLGVALSL
TRRRQLLAWAANVQAWIIEDDYDSEFRYHGKPLPPLKSLDAPQRVIYAGTFSKSLFPALRTAWLVVPIKQIEHFRQQASL
MPCSVPLLWQHTLADFIRDGHFWRHLKKMRQHYAQRRLWIEEALAEQGFVVTLQKGGIQLVIEVEGDDKAQVAKANQAGL
AVQALSRWRVVSSGKGGILLSFTNITSAGMAKQVAWQLRQAIQ

Specific function: Could play a regulatory role in the transcription of the moc genes for rhizopine catabolism. Could also have an aminotransferase activity [H]

COG id: COG1167

COG function: function code KE; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787710, Length=383, Percent_Identity=30.2872062663185, Blast_Score=137, Evalue=2e-33,
Organism=Escherichia coli, GI1790797, Length=433, Percent_Identity=29.7921478060046, Blast_Score=134, Evalue=1e-32,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004839
- InterPro:   IPR000524
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00155 Aminotran_1_2; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 49537; Mature: 49406

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRYQHIARQLKTAIEQGELAPGTRLPSSRTWAQELGVSRATVENAYGELVAQGWLERRG
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
QAGTFVSNALRFETAPPIPAVFAGESPEPKPFQMGLPALDLFPREKWARVMGRRLRTQTR
CCCHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHH
FDLALGDVCGEAILRQAIVDYLRVSRSIECLPEQVFITSGYADSMRLILRTLSVPGDSMW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCCEE
VEDPGFPLIRPVITQEGITLAPIPVDADGLNVAAGMRDCPQGRFALVTPAHQSPLGVALS
EECCCCCHHHHHHCCCCCEEECCCCCCCCCEEECCCCCCCCCCEEEEECCCCCCCHHHHH
LTRRRQLLAWAANVQAWIIEDDYDSEFRYHGKPLPPLKSLDAPQRVIYAGTFSKSLFPAL
HHHHHHHHHHHCCCEEEEEECCCCCCCEECCCCCCCCCCCCCCCEEEEEECCHHHHHHHH
RTAWLVVPIKQIEHFRQQASLMPCSVPLLWQHTLADFIRDGHFWRHLKKMRQHYAQRRLW
HHHHHEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
IEEALAEQGFVVTLQKGGIQLVIEVEGDDKAQVAKANQAGLAVQALSRWRVVSSGKGGIL
HHHHHHCCCEEEEEECCCEEEEEEECCCCCHHHHCCCCCCHHHHHHHHHHEEECCCCCEE
LSFTNITSAGMAKQVAWQLRQAIQ
EEECCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PRYQHIARQLKTAIEQGELAPGTRLPSSRTWAQELGVSRATVENAYGELVAQGWLERRG
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
QAGTFVSNALRFETAPPIPAVFAGESPEPKPFQMGLPALDLFPREKWARVMGRRLRTQTR
CCCHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHH
FDLALGDVCGEAILRQAIVDYLRVSRSIECLPEQVFITSGYADSMRLILRTLSVPGDSMW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCCEE
VEDPGFPLIRPVITQEGITLAPIPVDADGLNVAAGMRDCPQGRFALVTPAHQSPLGVALS
EECCCCCHHHHHHCCCCCEEECCCCCCCCCEEECCCCCCCCCCEEEEECCCCCCCHHHHH
LTRRRQLLAWAANVQAWIIEDDYDSEFRYHGKPLPPLKSLDAPQRVIYAGTFSKSLFPAL
HHHHHHHHHHHCCCEEEEEECCCCCCCEECCCCCCCCCCCCCCCEEEEEECCHHHHHHHH
RTAWLVVPIKQIEHFRQQASLMPCSVPLLWQHTLADFIRDGHFWRHLKKMRQHYAQRRLW
HHHHHEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
IEEALAEQGFVVTLQKGGIQLVIEVEGDDKAQVAKANQAGLAVQALSRWRVVSSGKGGIL
HHHHHHCCCEEEEEECCCEEEEEEECCCCCHHHHCCCCCCHHHHHHHHHHEEECCCCCEE
LSFTNITSAGMAKQVAWQLRQAIQ
EEECCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7845353 [H]