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The map label for this gene is ydaU [H]

Identifier: 194735893

GI number: 194735893

Start: 2154352

End: 2155329

Strand: Reverse

Name: ydaU [H]

Synonym: SeSA_A2284

Alternate gene names: 194735893

Gene position: 2155329-2154352 (Counterclockwise)

Preceding gene: 194735203

Following gene: 194738173

Centisome position: 45.77

GC content: 46.83

Gene sequence:

>978_bases
ATGTCAAATACCGCTGAAATATACAAATTCCCTGCGCCGATACCGACGCAACAGGAGTGCCGTATGGCTGATCTGGAAAA
TGGCTATTTACGTTTAGCTAATCAGATCCAGGACGCCTTGTGTATCGTTGAACTATCGGGGCGTGAGTTCCGTGTTTTGA
ATGCGATTATCCGGCTGACTTATGGCTGGTCGAAAAAATCAGATCGTATTGCCAACAGCCTCATTGCAGATAAGACAACA
CTGAAGGTAAAGCATGTATCCGAAGCGGTGCTGAGTCTTGCCTATCGTAACATCATTATCCTGCGCCGTATTGGTCAAAC
AAGATACATAGGGATTAATACAAACCTGGATAAATGGGCTTATTCCAAGCCACATTGCTCAAAATGTCCGGTGTCTTTTC
CTGATGATGAAATTGCCACATGGATTATTTCTGTACCTGAAACCAGGGATAGTTATCCCCGAAAAGGGGGAAGGGCATCC
CCGAAAACGGGGATAGTTATCCCTGAAAACAGGGATAGCGTTTTACCCCATTCAGCCATCCCTGAAAACGGGGATAGTTA
TCCCCGAAAAGAGGGAAGGGCATCCCCGAAAACAGGGAACACCAAAGACATTATTCCAAAGACAAATATAAAAGATCTAA
CCCCCTTTAATCCCCCTAAGGGAAAAGTGAAGTTTGATCCGTTGAGTATTCCTGTTCCCGAATGGCTGAATGCTGCGTCG
TGGAACGAATGGGTCACATACCGCCAGCAATCCGGAAAGCCCATAAAAACCGAACTGACGGTAACAAAAGCTTTCAGGCT
TCTGAAGGAGTGCCTGGATGAAGGCCACGATCCGGTAAACGTCATCAACACAAGCATTGCCAACGGCTACCAGGGACTAT
TCAAACCGAAGTTCGCTCTCAACGACCGAAGAGCTGGCAGAGATGTGAACCACATTTCTGCGCCAGACAAAACCATTCCT
ACCGGATTCAGGGGGTAA

Upstream 100 bases:

>100_bases
GTGGGACTGAAAATGGCAGCAACTAAAAAGGCGAAAGCCGCGGTGAGGGGTCACCAACGGCTTTCTGGTGCAAAAACGGT
AGGTAATTGCGGAGATGAGT

Downstream 100 bases:

>100_bases
CGATGAAAAACGTAATCGGTACTGGCAGTGCGCTTGATCGCCTGAAAAGAATTATCCCAGCCAGTGTGCAGCCGAAATTC
TCGACTGCTGATGAGTGGCG

Product: gifsy-1 prophage PrpO

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 324

Protein sequence:

>325_residues
MSNTAEIYKFPAPIPTQQECRMADLENGYLRLANQIQDALCIVELSGREFRVLNAIIRLTYGWSKKSDRIANSLIADKTT
LKVKHVSEAVLSLAYRNIIILRRIGQTRYIGINTNLDKWAYSKPHCSKCPVSFPDDEIATWIISVPETRDSYPRKGGRAS
PKTGIVIPENRDSVLPHSAIPENGDSYPRKEGRASPKTGNTKDIIPKTNIKDLTPFNPPKGKVKFDPLSIPVPEWLNAAS
WNEWVTYRQQSGKPIKTELTVTKAFRLLKECLDEGHDPVNVINTSIANGYQGLFKPKFALNDRRAGRDVNHISAPDKTIP
TGFRG

Sequences:

>Translated_325_residues
MSNTAEIYKFPAPIPTQQECRMADLENGYLRLANQIQDALCIVELSGREFRVLNAIIRLTYGWSKKSDRIANSLIADKTT
LKVKHVSEAVLSLAYRNIIILRRIGQTRYIGINTNLDKWAYSKPHCSKCPVSFPDDEIATWIISVPETRDSYPRKGGRAS
PKTGIVIPENRDSVLPHSAIPENGDSYPRKEGRASPKTGNTKDIIPKTNIKDLTPFNPPKGKVKFDPLSIPVPEWLNAAS
WNEWVTYRQQSGKPIKTELTVTKAFRLLKECLDEGHDPVNVINTSIANGYQGLFKPKFALNDRRAGRDVNHISAPDKTIP
TGFRG
>Mature_324_residues
SNTAEIYKFPAPIPTQQECRMADLENGYLRLANQIQDALCIVELSGREFRVLNAIIRLTYGWSKKSDRIANSLIADKTTL
KVKHVSEAVLSLAYRNIIILRRIGQTRYIGINTNLDKWAYSKPHCSKCPVSFPDDEIATWIISVPETRDSYPRKGGRASP
KTGIVIPENRDSVLPHSAIPENGDSYPRKEGRASPKTGNTKDIIPKTNIKDLTPFNPPKGKVKFDPLSIPVPEWLNAASW
NEWVTYRQQSGKPIKTELTVTKAFRLLKECLDEGHDPVNVINTSIANGYQGLFKPKFALNDRRAGRDVNHISAPDKTIPT
GFRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787622, Length=120, Percent_Identity=45.8333333333333, Blast_Score=103, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010781 [H]

Pfam domain/function: PF07120 DUF1376 [H]

EC number: NA

Molecular weight: Translated: 36451; Mature: 36320

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNTAEIYKFPAPIPTQQECRMADLENGYLRLANQIQDALCIVELSGREFRVLNAIIRLT
CCCCCCEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHH
YGWSKKSDRIANSLIADKTTLKVKHVSEAVLSLAYRNIIILRRIGQTRYIGINTNLDKWA
CCCCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHEEEECCCEEEEEECCCCHHHC
YSKPHCSKCPVSFPDDEIATWIISVPETRDSYPRKGGRASPKTGIVIPENRDSVLPHSAI
CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCC
PENGDSYPRKEGRASPKTGNTKDIIPKTNIKDLTPFNPPKGKVKFDPLSIPVPEWLNAAS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHCCCC
WNEWVTYRQQSGKPIKTELTVTKAFRLLKECLDEGHDPVNVINTSIANGYQGLFKPKFAL
HHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHCCCCCCC
NDRRAGRDVNHISAPDKTIPTGFRG
CCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SNTAEIYKFPAPIPTQQECRMADLENGYLRLANQIQDALCIVELSGREFRVLNAIIRLT
CCCCCEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHH
YGWSKKSDRIANSLIADKTTLKVKHVSEAVLSLAYRNIIILRRIGQTRYIGINTNLDKWA
CCCCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHEEEECCCEEEEEECCCCHHHC
YSKPHCSKCPVSFPDDEIATWIISVPETRDSYPRKGGRASPKTGIVIPENRDSVLPHSAI
CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCC
PENGDSYPRKEGRASPKTGNTKDIIPKTNIKDLTPFNPPKGKVKFDPLSIPVPEWLNAAS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHCCCC
WNEWVTYRQQSGKPIKTELTVTKAFRLLKECLDEGHDPVNVINTSIANGYQGLFKPKFAL
HHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHCCCCCCC
NDRRAGRDVNHISAPDKTIPTGFRG
CCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]