Click here to switch to the map view.

The map label for this gene is 194735659

Identifier: 194735659

GI number: 194735659

Start: 621067

End: 622386

Strand: Direct

Name: 194735659

Synonym: SeSA_A0633

Alternate gene names: NA

Gene position: 621067-622386 (Clockwise)

Preceding gene: 194734494

Following gene: 194735139

Centisome position: 13.19

GC content: 50.15

Gene sequence:

>1320_bases
ATGGAAAGCCAAGTTGACCTCCAGATACCTGCCAAGTTAGTTCCTGTATTCGCGACAGAAGGAGTCCGTTATCGTGGTGC
TCACGGTGGACGTGGATCTGCTAAGACGCGTACTTTTGCACTAATGACTGCCGTCAAAGCGTATCAAGCGGCAGAAGCCA
ATATCAGTGGAGTTATCCTGTGCGCTCGAGAATACATGAACTCGCTGGAAGAATCCTCCATGGAGGAGGTAAAGCAGGCA
ATTCGCTCCGTGGCGTGGCTTGACGATTACTTCGACATTGGAGAGAAATACATCAGGACAAAGAACCGCAAGGTCAGCTA
TGTATTCTGCGGTCTTCGCCATAACCTAGACAGCATCAAATCAAAAGCGCGAATTCTTGTAGCCTGGGTTGACGAGGCCG
AGTCTGTTTCTTCGACTGCGTGGAAAAAGCTTCGCCCGACCGTTCGTGAAGAAGGCTCAGAAATCTGGGTTACGTGGAAC
CCGGAGAAGGACGGCAGCGCCACCGACAAACTTTTCAGAAAGAATCCCCCAAAAAGCTCAATTATTGTCGAGATGAACTA
TGTTGACAATCCATGGTTCCCCGCGGTGCTTGAGGAAGAGCGACAGGAAGACCTGGCAAACCTTGATTACGCAGATTACG
CGTGGATATGGGAGGGGGCTTACCTCGAAAACTCAGATAAGCAGGTGCTGGCTAACAAATATGTCGTGCAGAGCTTCGAA
GACAATCTATGGAGGAAATCAGAGCGCTTGCTGTTCGGTGCTGACTTCGGATTCGCGAAAGACCCCAGCACGCTTATTCG
CATGTTCATTCTGGATAACAACCTCTACATCGAATACGAGGCCTACGGCAATGGCGTAGAGCTCGACGATATGTGGAAGT
TTTATGCAGGCAAAACCGATGCCACGCCGAAACAGCTTGAGGACTGGGAGGTCACTGACGATGCGAAATTCCCCGGTATC
CCTGAAGCGCGTAAATGGCCCATCAAAGCCGACAACTCCAGGCCAGAAACTATCAGCCATATCAAAGGGCAGGGATTCAA
CATCTCAGCTGCTCAGAAATGGCAGGGTAGCGTAGAGGACGGCATCACTTTCCTACGTGGATTTAAGAAGATCATCATCC
ATCCTCGCTGCAAAGAAACAGCGAAAGAGGCGCGGCTTTACTCGTACAAAACAGACCGTATCACTGGCGAAGTCTTGCCG
ATTATCGAGGATAAGTACAACCACTGCTGGGATGGAATCCGATACGGTCTGGACGGGTATATCAAACGCAAACCTCAATC
GATGGGGATGATGATTCCTAAGCGCCTTAGGGGGAAATAA

Upstream 100 bases:

>100_bases
CTGGTCGGCCTTGATAAGCAGATTATCGATCACACCTCATCTGATGGAACCATGGCAACGAAGCCAACCACTATTCGCCT
GGTAGGAGTTGACCCAGCCA

Downstream 100 bases:

>100_bases
TCATGAAAAACAAATGCAAATGCCCTGGCTGCGAACGCAAAAGAAAAGGCGGGCCGGGTTATCAGCCATGTGCCACCAAA
TATCCTGCCAGGGGAATTGC

Product: phage terminase, large subunit, pbsx family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 439; Mature: 439

Protein sequence:

>439_residues
MESQVDLQIPAKLVPVFATEGVRYRGAHGGRGSAKTRTFALMTAVKAYQAAEANISGVILCAREYMNSLEESSMEEVKQA
IRSVAWLDDYFDIGEKYIRTKNRKVSYVFCGLRHNLDSIKSKARILVAWVDEAESVSSTAWKKLRPTVREEGSEIWVTWN
PEKDGSATDKLFRKNPPKSSIIVEMNYVDNPWFPAVLEEERQEDLANLDYADYAWIWEGAYLENSDKQVLANKYVVQSFE
DNLWRKSERLLFGADFGFAKDPSTLIRMFILDNNLYIEYEAYGNGVELDDMWKFYAGKTDATPKQLEDWEVTDDAKFPGI
PEARKWPIKADNSRPETISHIKGQGFNISAAQKWQGSVEDGITFLRGFKKIIIHPRCKETAKEARLYSYKTDRITGEVLP
IIEDKYNHCWDGIRYGLDGYIKRKPQSMGMMIPKRLRGK

Sequences:

>Translated_439_residues
MESQVDLQIPAKLVPVFATEGVRYRGAHGGRGSAKTRTFALMTAVKAYQAAEANISGVILCAREYMNSLEESSMEEVKQA
IRSVAWLDDYFDIGEKYIRTKNRKVSYVFCGLRHNLDSIKSKARILVAWVDEAESVSSTAWKKLRPTVREEGSEIWVTWN
PEKDGSATDKLFRKNPPKSSIIVEMNYVDNPWFPAVLEEERQEDLANLDYADYAWIWEGAYLENSDKQVLANKYVVQSFE
DNLWRKSERLLFGADFGFAKDPSTLIRMFILDNNLYIEYEAYGNGVELDDMWKFYAGKTDATPKQLEDWEVTDDAKFPGI
PEARKWPIKADNSRPETISHIKGQGFNISAAQKWQGSVEDGITFLRGFKKIIIHPRCKETAKEARLYSYKTDRITGEVLP
IIEDKYNHCWDGIRYGLDGYIKRKPQSMGMMIPKRLRGK
>Mature_439_residues
MESQVDLQIPAKLVPVFATEGVRYRGAHGGRGSAKTRTFALMTAVKAYQAAEANISGVILCAREYMNSLEESSMEEVKQA
IRSVAWLDDYFDIGEKYIRTKNRKVSYVFCGLRHNLDSIKSKARILVAWVDEAESVSSTAWKKLRPTVREEGSEIWVTWN
PEKDGSATDKLFRKNPPKSSIIVEMNYVDNPWFPAVLEEERQEDLANLDYADYAWIWEGAYLENSDKQVLANKYVVQSFE
DNLWRKSERLLFGADFGFAKDPSTLIRMFILDNNLYIEYEAYGNGVELDDMWKFYAGKTDATPKQLEDWEVTDDAKFPGI
PEARKWPIKADNSRPETISHIKGQGFNISAAQKWQGSVEDGITFLRGFKKIIIHPRCKETAKEARLYSYKTDRITGEVLP
IIEDKYNHCWDGIRYGLDGYIKRKPQSMGMMIPKRLRGK

Specific function: Unknown

COG id: COG1783

COG function: function code R; Phage terminase large subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006701
- InterPro:   IPR006437 [H]

Pfam domain/function: PF04466 Terminase_3 [H]

EC number: NA

Molecular weight: Translated: 50421; Mature: 50421

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESQVDLQIPAKLVPVFATEGVRYRGAHGGRGSAKTRTFALMTAVKAYQAAEANISGVIL
CCCCEEEECCHHHEEEEECCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEE
CAREYMNSLEESSMEEVKQAIRSVAWLDDYFDIGEKYIRTKNRKVSYVFCGLRHNLDSIK
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHC
SKARILVAWVDEAESVSSTAWKKLRPTVREEGSEIWVTWNPEKDGSATDKLFRKNPPKSS
CCCEEEEEEECCHHHHHHHHHHHHCCHHHCCCCEEEEEECCCCCCCHHHHHHHCCCCCCE
IIVEMNYVDNPWFPAVLEEERQEDLANLDYADYAWIWEGAYLENSDKQVLANKYVVQSFE
EEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCEECCCCHHHHHHHHHHHHHH
DNLWRKSERLLFGADFGFAKDPSTLIRMFILDNNLYIEYEAYGNGVELDDMWKFYAGKTD
HHHHHCCCCEEEEECCCCCCCHHHHEEEEEECCCEEEEEECCCCCCCHHHHHHHHCCCCC
ATPKQLEDWEVTDDAKFPGIPEARKWPIKADNSRPETISHIKGQGFNISAAQKWQGSVED
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHCCCCHHH
GITFLRGFKKIIIHPRCKETAKEARLYSYKTDRITGEVLPIIEDKYNHCWDGIRYGLDGY
HHHHHHHHHHHEECCCHHHHHHHHHHHEEECCCCCCCEEHHHHHHHHHHHHHHHHCCCHH
IKRKPQSMGMMIPKRLRGK
HCCCCHHCCCCCCHHHCCC
>Mature Secondary Structure
MESQVDLQIPAKLVPVFATEGVRYRGAHGGRGSAKTRTFALMTAVKAYQAAEANISGVIL
CCCCEEEECCHHHEEEEECCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEE
CAREYMNSLEESSMEEVKQAIRSVAWLDDYFDIGEKYIRTKNRKVSYVFCGLRHNLDSIK
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHC
SKARILVAWVDEAESVSSTAWKKLRPTVREEGSEIWVTWNPEKDGSATDKLFRKNPPKSS
CCCEEEEEEECCHHHHHHHHHHHHCCHHHCCCCEEEEEECCCCCCCHHHHHHHCCCCCCE
IIVEMNYVDNPWFPAVLEEERQEDLANLDYADYAWIWEGAYLENSDKQVLANKYVVQSFE
EEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCEECCCCHHHHHHHHHHHHHH
DNLWRKSERLLFGADFGFAKDPSTLIRMFILDNNLYIEYEAYGNGVELDDMWKFYAGKTD
HHHHHCCCCEEEEECCCCCCCHHHHEEEEEECCCEEEEEECCCCCCCHHHHHHHHCCCCC
ATPKQLEDWEVTDDAKFPGIPEARKWPIKADNSRPETISHIKGQGFNISAAQKWQGSVED
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHCCCCHHH
GITFLRGFKKIIIHPRCKETAKEARLYSYKTDRITGEVLPIIEDKYNHCWDGIRYGLDGY
HHHHHHHHHHHEECCCHHHHHHHHHHHEEECCCCCCCEEHHHHHHHHHHHHHHHHCCCHH
IKRKPQSMGMMIPKRLRGK
HCCCCHHCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]