| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
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The map label for this gene is 194735545
Identifier: 194735545
GI number: 194735545
Start: 2104941
End: 2105951
Strand: Direct
Name: 194735545
Synonym: SeSA_A2220
Alternate gene names: NA
Gene position: 2104941-2105951 (Clockwise)
Preceding gene: 194735913
Following gene: 194734366
Centisome position: 44.7
GC content: 61.62
Gene sequence:
>1011_bases ATGGCGATTTATACCCGAACAGGTGACGCTGGCACCACATCACTGTTTACCGGCCAGCGGGTGAGCAAAACCCACCCGCG GGTTGAAGCCTACGGCACGCTGGATGAGCTGAACGCCGCGCTGAGCCTGTGCGCCTGCGCCGCTGCGGATGAAAATCACC GCACCTTACTCGAGGCCATCCAGCAGCAACTTTTTTGGTTTAGCGCAGAGCTGGCCAGCGACAGCGAGCACCCGTCGCCC AAACAGCGCTACATCAGCAGCGAAGAGATTTCGGCCCTGGAAGCCGCTATCGATCGGGCAATGGCCCGCGTCGAACCGCT GCACAGCTTTATTTTACCCGGACGCTGCGAAGCCGCGAGCCGATTACATTTTGCCCGCACGCTGGCGCGCCGCGCCGAAC GCCGGCTGGTTGAGCTGGCGGCGGAAGTCAACGTACGTCAGGTGCTGATGCGCTATATCAACCGCTTATCGGACTGCCTG TACGCCCTGGCCCGCGCGGAAGATAGCGATGCGCACCAGGCCAACATCATCCGTGAAGTTAGCAAGCGCTATCTGGCTGC CTGCCAGCCGCCCCACAGCAAGGAGACGACGCCAGTGGCCCTCTCATTCCACGATCTGCACCAGCTCACCCGCGCCGCCG TTGAACGCGCGCAGCAACTGCAGGTTCCGGTAGTCGTCAGCATCGTTGACGCGCACGGCACGGAAACTGTGACCTGGCGG ATGCCGGACGCCCTGCTGGTCAGCAGCGAGCTGGCGCCGAAAAAGGCCTGGACCGCAGTGGCGATGAAAACGGCGACCCA TGAGCTGAGCGATATCGTTCAGCCGGGCGCCGCGCTTTACGGTCTGGAAAGTCATTTACAGGGAAAAGTGGTCACCTTTG GCGGCGGTTACGCCCTGTGGCGCGACGGCATATTAATTGGGGGTCTTGGCATCAGCGGCGGCAGCGTTGAGCAGGACATG GACATAGCACAGACCGCCATCGCGGCTATTAACGTGGGAACACATCAATGA
Upstream 100 bases:
>100_bases CGGCGGCTCCAGCGCCAGGCACGTTTTTTCCGGGCCAAATGAGGCCATCGACCTCGCCGTTGTCGGCATTGTAGATACGC TTTCGCGTTAAGGGGCGGTT
Downstream 100 bases:
>100_bases ATACTTCTGAACTCGAAACCCTGATTCGCACCATTCTTAGCGAGCAATTAACCACGCCAGCGCAAACACCGGCCCAGCCT CAGGGCAAAGGGATTTTCCA
Product: PduO
Products: NA
Alternate protein names: Cob(I)alamin adenosyltransferase; ORFW [H]
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MAIYTRTGDAGTTSLFTGQRVSKTHPRVEAYGTLDELNAALSLCACAAADENHRTLLEAIQQQLFWFSAELASDSEHPSP KQRYISSEEISALEAAIDRAMARVEPLHSFILPGRCEAASRLHFARTLARRAERRLVELAAEVNVRQVLMRYINRLSDCL YALARAEDSDAHQANIIREVSKRYLAACQPPHSKETTPVALSFHDLHQLTRAAVERAQQLQVPVVVSIVDAHGTETVTWR MPDALLVSSELAPKKAWTAVAMKTATHELSDIVQPGAALYGLESHLQGKVVTFGGGYALWRDGILIGGLGISGGSVEQDM DIAQTAIAAINVGTHQ
Sequences:
>Translated_336_residues MAIYTRTGDAGTTSLFTGQRVSKTHPRVEAYGTLDELNAALSLCACAAADENHRTLLEAIQQQLFWFSAELASDSEHPSP KQRYISSEEISALEAAIDRAMARVEPLHSFILPGRCEAASRLHFARTLARRAERRLVELAAEVNVRQVLMRYINRLSDCL YALARAEDSDAHQANIIREVSKRYLAACQPPHSKETTPVALSFHDLHQLTRAAVERAQQLQVPVVVSIVDAHGTETVTWR MPDALLVSSELAPKKAWTAVAMKTATHELSDIVQPGAALYGLESHLQGKVVTFGGGYALWRDGILIGGLGISGGSVEQDM DIAQTAIAAINVGTHQ >Mature_335_residues AIYTRTGDAGTTSLFTGQRVSKTHPRVEAYGTLDELNAALSLCACAAADENHRTLLEAIQQQLFWFSAELASDSEHPSPK QRYISSEEISALEAAIDRAMARVEPLHSFILPGRCEAASRLHFARTLARRAERRLVELAAEVNVRQVLMRYINRLSDCLY ALARAEDSDAHQANIIREVSKRYLAACQPPHSKETTPVALSFHDLHQLTRAAVERAQQLQVPVVVSIVDAHGTETVTWRM PDALLVSSELAPKKAWTAVAMKTATHELSDIVQPGAALYGLESHLQGKVVTFGGGYALWRDGILIGGLGISGGSVEQDMD IAQTAIAAINVGTHQ
Specific function: Unknown
COG id: COG2096
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Cob(I)alamin adenosyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI16418349, Length=168, Percent_Identity=37.5, Blast_Score=96, Evalue=5e-20, Organism=Caenorhabditis elegans, GI115534154, Length=166, Percent_Identity=30.1204819277108, Blast_Score=80, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017858 - InterPro: IPR002779 - InterPro: IPR016030 - ProDom: PD007457 [H]
Pfam domain/function: PF01923 Cob_adeno_trans [H]
EC number: =2.5.1.17 [H]
Molecular weight: Translated: 36627; Mature: 36496
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIYTRTGDAGTTSLFTGQRVSKTHPRVEAYGTLDELNAALSLCACAAADENHRTLLEAI CEEEEECCCCCCCHHCCCCCHHCCCCCHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHH QQQLFWFSAELASDSEHPSPKQRYISSEEISALEAAIDRAMARVEPLHSFILPGRCEAAS HHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH RLHFARTLARRAERRLVELAAEVNVRQVLMRYINRLSDCLYALARAEDSDAHQANIIREV HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH SKRYLAACQPPHSKETTPVALSFHDLHQLTRAAVERAQQLQVPVVVSIVDAHGTETVTWR HHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEE MPDALLVSSELAPKKAWTAVAMKTATHELSDIVQPGAALYGLESHLQGKVVTFGGGYALW CCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEECCCCHHH RDGILIGGLGISGGSVEQDMDIAQTAIAAINVGTHQ HCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure AIYTRTGDAGTTSLFTGQRVSKTHPRVEAYGTLDELNAALSLCACAAADENHRTLLEAI EEEEECCCCCCCHHCCCCCHHCCCCCHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHH QQQLFWFSAELASDSEHPSPKQRYISSEEISALEAAIDRAMARVEPLHSFILPGRCEAAS HHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH RLHFARTLARRAERRLVELAAEVNVRQVLMRYINRLSDCLYALARAEDSDAHQANIIREV HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH SKRYLAACQPPHSKETTPVALSFHDLHQLTRAAVERAQQLQVPVVVSIVDAHGTETVTWR HHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEE MPDALLVSSELAPKKAWTAVAMKTATHELSDIVQPGAALYGLESHLQGKVVTFGGGYALW CCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEECCCCHHH RDGILIGGLGISGGSVEQDMDIAQTAIAAINVGTHQ HCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA