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The map label for this gene is dapB [H]

Identifier: 194735525

GI number: 194735525

Start: 74014

End: 74835

Strand: Direct

Name: dapB [H]

Synonym: SeSA_A0070

Alternate gene names: 194735525

Gene position: 74014-74835 (Clockwise)

Preceding gene: 194734090

Following gene: 194736367

Centisome position: 1.57

GC content: 55.96

Gene sequence:

>822_bases
ATGCATGAAGCACAGATCCGCGTTGCGATTGTCGGCGCCGGTGGCCGCATGGGACGGCAGTTAATCCAGGCCGCCATGGC
GATGGAAGGTGTTCAGCTGGGTGCCGCGCTGGAGCGCGAAGGCTCTTCATTGCTGGGTAGCGATGCGGGCGAACTGGCAG
GCGTGGGGAAAACGGGCGTCATCATTCAAAGCGATCTGGCGTCGGTCAAAGATGATTTCGATGTTCTGGTCGATTTTACC
CGTCCTGAAGGCACACTGGCGCATCTGGCATTCTGCCGTAAACATGGTAAAGGGATGGTGATTGGTACTACCGGCTTTGA
CGACGCCGGTAAACAGGCCATTCGCGAGGCGTCGCAAGAGATTGCGATCGTTTTCGCCGCAAACTTTAGCGTCGGCGTTA
ACGTCATGCTCAAGCTGCTGGAGAAAGCCGCGAAGGTAATGGGCGACTACACCGATATTGAAATTATTGAAGCGCACCAC
CGCCATAAAGTGGATGCACCGTCGGGTACGGCGCTGGCAATGGGCGAGGCAATCGCCGGGGCGCTGGATAAAGATCTGAA
GGACTGCGCGGTCTACTCGCGTGAAGGTTATACCGGCGAGCGCGTACCGGGAACGATTGGCTTTGCAACCGTTCGGGCGG
GCGACATCGTCGGCGAACATACCGCGATGTTTGCCGATATTGGCGAGCGCGTAGAGATTACGCATAAAGCTTCCAGTCGC
ATGACGTTTGCAAATGGCGCGTTGCGATCGGCATTATGGCTAAAAACGAAGAAAAATGGGCTATTTGACATGCGGGATGT
GCTGGGACTGGATGTACTATAA

Upstream 100 bases:

>100_bases
TATCATTAATTTCTAATTATCGGCGATTTTAGATGGCGGCCTCCGGGCGCGCTGGTTACTCTGAAAACGGTTTACGCAAT
TTTTACAAAAGAGAATAGCT

Downstream 100 bases:

>100_bases
CGACTAAATACCTTCGTGATGTGGTTGTGGTAATCAAGATTAATTGATTACAAAGGGCAATATATTATTGCCCTTTTGTT
TTTTGCCCCCCGGTTATTCG

Product: dihydrodipicolinate reductase

Products: NA

Alternate protein names: DHPR [H]

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MHEAQIRVAIVGAGGRMGRQLIQAAMAMEGVQLGAALEREGSSLLGSDAGELAGVGKTGVIIQSDLASVKDDFDVLVDFT
RPEGTLAHLAFCRKHGKGMVIGTTGFDDAGKQAIREASQEIAIVFAANFSVGVNVMLKLLEKAAKVMGDYTDIEIIEAHH
RHKVDAPSGTALAMGEAIAGALDKDLKDCAVYSREGYTGERVPGTIGFATVRAGDIVGEHTAMFADIGERVEITHKASSR
MTFANGALRSALWLKTKKNGLFDMRDVLGLDVL

Sequences:

>Translated_273_residues
MHEAQIRVAIVGAGGRMGRQLIQAAMAMEGVQLGAALEREGSSLLGSDAGELAGVGKTGVIIQSDLASVKDDFDVLVDFT
RPEGTLAHLAFCRKHGKGMVIGTTGFDDAGKQAIREASQEIAIVFAANFSVGVNVMLKLLEKAAKVMGDYTDIEIIEAHH
RHKVDAPSGTALAMGEAIAGALDKDLKDCAVYSREGYTGERVPGTIGFATVRAGDIVGEHTAMFADIGERVEITHKASSR
MTFANGALRSALWLKTKKNGLFDMRDVLGLDVL
>Mature_273_residues
MHEAQIRVAIVGAGGRMGRQLIQAAMAMEGVQLGAALEREGSSLLGSDAGELAGVGKTGVIIQSDLASVKDDFDVLVDFT
RPEGTLAHLAFCRKHGKGMVIGTTGFDDAGKQAIREASQEIAIVFAANFSVGVNVMLKLLEKAAKVMGDYTDIEIIEAHH
RHKVDAPSGTALAMGEAIAGALDKDLKDCAVYSREGYTGERVPGTIGFATVRAGDIVGEHTAMFADIGERVEITHKASSR
MTFANGALRSALWLKTKKNGLFDMRDVLGLDVL

Specific function: Biosynthesis of diaminopimelate and lysine from aspartate semialdehyde; second step. [C]

COG id: COG0289

COG function: function code E; Dihydrodipicolinate reductase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dihydrodipicolinate reductase family [H]

Homologues:

Organism=Escherichia coli, GI1786214, Length=273, Percent_Identity=88.6446886446886, Blast_Score=475, Evalue=1e-135,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022663
- InterPro:   IPR000846
- InterPro:   IPR022664
- InterPro:   IPR011770
- InterPro:   IPR016040 [H]

Pfam domain/function: PF05173 DapB_C; PF01113 DapB_N [H]

EC number: =1.3.1.26 [H]

Molecular weight: Translated: 28885; Mature: 28885

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: PS01298 DAPB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHEAQIRVAIVGAGGRMGRQLIQAAMAMEGVQLGAALEREGSSLLGSDAGELAGVGKTGV
CCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHCCCCCCCE
IIQSDLASVKDDFDVLVDFTRPEGTLAHLAFCRKHGKGMVIGTTGFDDAGKQAIREASQE
EEECHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCC
IAIVFAANFSVGVNVMLKLLEKAAKVMGDYTDIEIIEAHHRHKVDAPSGTALAMGEAIAG
EEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHCCCCCCCCCCEEHHHHHHHH
ALDKDLKDCAVYSREGYTGERVPGTIGFATVRAGDIVGEHTAMFADIGERVEITHKASSR
HHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCHHCHHHHHHHHCCCEEEEEECCCCC
MTFANGALRSALWLKTKKNGLFDMRDVLGLDVL
EEECCCHHHHHHEEEECCCCCCHHHHHHCCCCC
>Mature Secondary Structure
MHEAQIRVAIVGAGGRMGRQLIQAAMAMEGVQLGAALEREGSSLLGSDAGELAGVGKTGV
CCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHCCCCCCCE
IIQSDLASVKDDFDVLVDFTRPEGTLAHLAFCRKHGKGMVIGTTGFDDAGKQAIREASQE
EEECHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCC
IAIVFAANFSVGVNVMLKLLEKAAKVMGDYTDIEIIEAHHRHKVDAPSGTALAMGEAIAG
EEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHCCCCCCCCCCEEHHHHHHHH
ALDKDLKDCAVYSREGYTGERVPGTIGFATVRAGDIVGEHTAMFADIGERVEITHKASSR
HHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCHHCHHHHHHHHCCCEEEEEECCCCC
MTFANGALRSALWLKTKKNGLFDMRDVLGLDVL
EEECCCHHHHHHEEEECCCCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA