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The map label for this gene is yadC [H]

Identifier: 194735484

GI number: 194735484

Start: 212303

End: 213571

Strand: Reverse

Name: yadC [H]

Synonym: SeSA_A0203

Alternate gene names: 194735484

Gene position: 213571-212303 (Counterclockwise)

Preceding gene: 194736130

Following gene: 194734780

Centisome position: 4.54

GC content: 42.24

Gene sequence:

>1269_bases
ATGATAACAAAATGCGATCACCGACTGATGCTATTAAACACTCAGAGACTAAAGAGTGTCGTTAAAATCATATCATTATT
ACTGTTATCTTTCGTTTCTTTTGTGACGCCTTCGTATGGCTGGTCACTATATGTAGGCCAATATACAAAGAATGAAGGGG
GAAACGTATGGGGAGCGGTGCAGGATTTTACAAAATCCTATGCGCCCAAAAACATGCTTAATCCAATAGCTATTCATAAC
GGCTCAGGACTGCGTGAAATCTCCGTATCGAATGATGCGACAGAGCTCGACCCCACTACTGGGCTAAGTTGTAACAAAGA
TGGCGATAACCATGTCCTGACACTGTATCATGGCTACAAGAACTCCGGTAAAACCTACAACGGTAATATGTTATGGGAAA
CTAATACTCCTGGTATGTACATGGGTATCGAAGTCACCAATATCAACTTTGGCGGCCAATACTGGGGTGAAAAATTCTGG
ATAAACTGGAGCAACGGAGAAACGTCCGGCGCAAAAAAATTTGATTTAACAAATATCATGCCAAAGGATGGTCGTTTCGA
ACTCTGTCAGAGGCCAACCAACTGGACCTATTTTGGATTAGGCGGTATTGTTCTGTGGGTTAAATATCATTTGTATATTG
ATGACTCTTTTAATCCTGCCGGAGCAACTTCGTTATCTGTCTCGCTACGAAAAGAACAATCGTATGATTATCAATTTGCT
TCATCACCAGCCTTCTCAGGCTCACATAATGTATATTACAATATAGCACCAAATCAGTTGACGATTAACTATCCTACCTG
CCAGGCCAATGCGGTCACAGGCGATGGGGTAACAAATTCAACGGTTCCATTTGGGGAACAGAATGCCAAAGACATTTCGG
CGAATACCATTAACCGCAAATTTTCCATAAAGCTCAGTAATTGCGCTTACGTTAAAGAATTGAATGTTACGTTAAGTTCT
GCAACGGTAGGAGGACAGGATAACACCTTGCTCGGTAATACACTTACCGGCAGTGAGGCGGCTGGTGGTATCGGTGTCAT
GATCGAAGGGGAGAAAAATCCAAATAGCCCTGCTGACTGGACCTTACTTAAGCCAAACATCAGCAGTTCTATTTATTCTT
TTACTAATTCCCCGGATTACGAAAATAGCGAAATTGGGAATGCTGAGCAGGTAATGAATTTCCAGGCGACCCTGAAACAG
GATGGTAACAAAGCGATAACCCCAGGAAAATTCAAAGCTACGGGTAAATTCACCATTACTTATCCCTGA

Upstream 100 bases:

>100_bases
GCAGAAAGTCCTCAGTAACGACGTGGTCGTCCCCGGCAAACTCAGCAGCCGCGTGCTGGTAAATGTTGAATACGAATAAC
GTGAGGACCAGTTAACTATT

Downstream 100 bases:

>100_bases
TGTTTATTCCGGCAGACCTCCTCTGCCGGTTTTTTCCTTTCCCACAAAGCGCTAACACTTTCTTCGGTCATTCCCCTACA
ATGCGGCCATTCTATTCATC

Product: putative fimbrial-like adhesin protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 422; Mature: 422

Protein sequence:

>422_residues
MITKCDHRLMLLNTQRLKSVVKIISLLLLSFVSFVTPSYGWSLYVGQYTKNEGGNVWGAVQDFTKSYAPKNMLNPIAIHN
GSGLREISVSNDATELDPTTGLSCNKDGDNHVLTLYHGYKNSGKTYNGNMLWETNTPGMYMGIEVTNINFGGQYWGEKFW
INWSNGETSGAKKFDLTNIMPKDGRFELCQRPTNWTYFGLGGIVLWVKYHLYIDDSFNPAGATSLSVSLRKEQSYDYQFA
SSPAFSGSHNVYYNIAPNQLTINYPTCQANAVTGDGVTNSTVPFGEQNAKDISANTINRKFSIKLSNCAYVKELNVTLSS
ATVGGQDNTLLGNTLTGSEAAGGIGVMIEGEKNPNSPADWTLLKPNISSSIYSFTNSPDYENSEIGNAEQVMNFQATLKQ
DGNKAITPGKFKATGKFTITYP

Sequences:

>Translated_422_residues
MITKCDHRLMLLNTQRLKSVVKIISLLLLSFVSFVTPSYGWSLYVGQYTKNEGGNVWGAVQDFTKSYAPKNMLNPIAIHN
GSGLREISVSNDATELDPTTGLSCNKDGDNHVLTLYHGYKNSGKTYNGNMLWETNTPGMYMGIEVTNINFGGQYWGEKFW
INWSNGETSGAKKFDLTNIMPKDGRFELCQRPTNWTYFGLGGIVLWVKYHLYIDDSFNPAGATSLSVSLRKEQSYDYQFA
SSPAFSGSHNVYYNIAPNQLTINYPTCQANAVTGDGVTNSTVPFGEQNAKDISANTINRKFSIKLSNCAYVKELNVTLSS
ATVGGQDNTLLGNTLTGSEAAGGIGVMIEGEKNPNSPADWTLLKPNISSSIYSFTNSPDYENSEIGNAEQVMNFQATLKQ
DGNKAITPGKFKATGKFTITYP
>Mature_422_residues
MITKCDHRLMLLNTQRLKSVVKIISLLLLSFVSFVTPSYGWSLYVGQYTKNEGGNVWGAVQDFTKSYAPKNMLNPIAIHN
GSGLREISVSNDATELDPTTGLSCNKDGDNHVLTLYHGYKNSGKTYNGNMLWETNTPGMYMGIEVTNINFGGQYWGEKFW
INWSNGETSGAKKFDLTNIMPKDGRFELCQRPTNWTYFGLGGIVLWVKYHLYIDDSFNPAGATSLSVSLRKEQSYDYQFA
SSPAFSGSHNVYYNIAPNQLTINYPTCQANAVTGDGVTNSTVPFGEQNAKDISANTINRKFSIKLSNCAYVKELNVTLSS
ATVGGQDNTLLGNTLTGSEAAGGIGVMIEGEKNPNSPADWTLLKPNISSSIYSFTNSPDYENSEIGNAEQVMNFQATLKQ
DGNKAITPGKFKATGKFTITYP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

Organism=Escherichia coli, GI1786328, Length=352, Percent_Identity=34.6590909090909, Blast_Score=146, Evalue=2e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779
- InterPro:   IPR017014 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 46349; Mature: 46349

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITKCDHRLMLLNTQRLKSVVKIISLLLLSFVSFVTPSYGWSLYVGQYTKNEGGNVWGAV
CCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCEEEHH
QDFTKSYAPKNMLNPIAIHNGSGLREISVSNDATELDPTTGLSCNKDGDNHVLTLYHGYK
HHHHHHCCCCHHCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCC
NSGKTYNGNMLWETNTPGMYMGIEVTNINFGGQYWGEKFWINWSNGETSGAKKFDLTNIM
CCCCEECCCEEEEECCCCEEEEEEEEEEECCCCCCCCEEEEEECCCCCCCCEEEECCCCC
PKDGRFELCQRPTNWTYFGLGGIVLWVKYHLYIDDSFNPAGATSLSVSLRKEQSYDYQFA
CCCCCHHHHCCCCCEEEEECCCEEEEEEEEEEECCCCCCCCCCEEEEEEECCCCCCEEEC
SSPAFSGSHNVYYNIAPNQLTINYPTCQANAVTGDGVTNSTVPFGEQNAKDISANTINRK
CCCCCCCCCCEEEEECCCEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEECCEE
FSIKLSNCAYVKELNVTLSSATVGGQDNTLLGNTLTGSEAAGGIGVMIEGEKNPNSPADW
EEEEECCEEEEEEEEEEEEEEEECCCCCEEECCCCCCCCCCCCEEEEEECCCCCCCCCCE
TLLKPNISSSIYSFTNSPDYENSEIGNAEQVMNFQATLKQDGNKAITPGKFKATGKFTIT
EEECCCCCCCEEECCCCCCCCCCCCCCHHHHHHHEEHHHCCCCCCCCCCCEEEEEEEEEE
YP
CC
>Mature Secondary Structure
MITKCDHRLMLLNTQRLKSVVKIISLLLLSFVSFVTPSYGWSLYVGQYTKNEGGNVWGAV
CCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCEEEHH
QDFTKSYAPKNMLNPIAIHNGSGLREISVSNDATELDPTTGLSCNKDGDNHVLTLYHGYK
HHHHHHCCCCHHCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCC
NSGKTYNGNMLWETNTPGMYMGIEVTNINFGGQYWGEKFWINWSNGETSGAKKFDLTNIM
CCCCEECCCEEEEECCCCEEEEEEEEEEECCCCCCCCEEEEEECCCCCCCCEEEECCCCC
PKDGRFELCQRPTNWTYFGLGGIVLWVKYHLYIDDSFNPAGATSLSVSLRKEQSYDYQFA
CCCCCHHHHCCCCCEEEEECCCEEEEEEEEEEECCCCCCCCCCEEEEEEECCCCCCEEEC
SSPAFSGSHNVYYNIAPNQLTINYPTCQANAVTGDGVTNSTVPFGEQNAKDISANTINRK
CCCCCCCCCCEEEEECCCEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEECCEE
FSIKLSNCAYVKELNVTLSSATVGGQDNTLLGNTLTGSEAAGGIGVMIEGEKNPNSPADW
EEEEECCEEEEEEEEEEEEEEEECCCCCEEECCCCCCCCCCCCEEEEEECCCCCCCCCCE
TLLKPNISSSIYSFTNSPDYENSEIGNAEQVMNFQATLKQDGNKAITPGKFKATGKFTIT
EEECCCCCCCEEECCCCCCCCCCCCCCHHHHHHHEEHHHCCCCCCCCCCCEEEEEEEEEE
YP
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8202364; 9278503; 8096212 [H]