| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
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The map label for this gene is 194735448
Identifier: 194735448
GI number: 194735448
Start: 1572616
End: 1573143
Strand: Reverse
Name: 194735448
Synonym: SeSA_A1633
Alternate gene names: NA
Gene position: 1573143-1572616 (Counterclockwise)
Preceding gene: 194734673
Following gene: 194738004
Centisome position: 33.41
GC content: 49.43
Gene sequence:
>528_bases ATGCAAAAAACGTCACTATTGTTTTCGGCCGCCGCGATAACGTTAACTCTGATGGCGTCATCGGCATCAGCGGCAACGCC AACCGCCGCACAAAATGAAGCTACGTCGACCGTTAAACAAGAAATTACAGAAGGTATTAACCGTTACCTTTATTCAATAG ATAAGGCAGACCCAACGTTAGGCAAGCAGCTCTTTTATGTTTCACCAGAAACCAGTTTTATTCATCCACGCGGTCACGAA CGCGGATGGTCGCAGATCGCTGAAAATTTTTATGGCACCACTATGGGTAAAACCTTCAGCAAACGCACATTAAAACTGGA CGCTCCCCCGGCTATTCATGTGTATGGCAATGCCGCCGTTGCAGAGTTCGACTGGCATTTTACCGCGGTACGCCGTGATA ATGGGCAGACTCAACACACGACAGGCCGCGAAAGCCAGGTGTGGGCGAAGATACCAAACACAGGATGGCGAATCGTTCAT GTCCACTACTCCGGTCCAGCCAAAACCGGCGTTGGAGAAGGCTATTAA
Upstream 100 bases:
>100_bases GATGTTTTTATTGTTCGTGAGCCATGCTCCTTTAGTATAAAGGTGAACGTAACAGGAAAGATAAAGCGTCTCAAAAACAG ACTATATGGGTATAACTATT
Downstream 100 bases:
>100_bases GCTTTGCTCTTCAGGTTATGGCGCAGATGAACATTCTGCGCCAGTTAAGACGATCTCAGGTCAGTTGATAGTGCTTATCC GGTATCCGTTTTGCCGGAAT
Product: putative outer membrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MQKTSLLFSAAAITLTLMASSASAATPTAAQNEATSTVKQEITEGINRYLYSIDKADPTLGKQLFYVSPETSFIHPRGHE RGWSQIAENFYGTTMGKTFSKRTLKLDAPPAIHVYGNAAVAEFDWHFTAVRRDNGQTQHTTGRESQVWAKIPNTGWRIVH VHYSGPAKTGVGEGY
Sequences:
>Translated_175_residues MQKTSLLFSAAAITLTLMASSASAATPTAAQNEATSTVKQEITEGINRYLYSIDKADPTLGKQLFYVSPETSFIHPRGHE RGWSQIAENFYGTTMGKTFSKRTLKLDAPPAIHVYGNAAVAEFDWHFTAVRRDNGQTQHTTGRESQVWAKIPNTGWRIVH VHYSGPAKTGVGEGY >Mature_175_residues MQKTSLLFSAAAITLTLMASSASAATPTAAQNEATSTVKQEITEGINRYLYSIDKADPTLGKQLFYVSPETSFIHPRGHE RGWSQIAENFYGTTMGKTFSKRTLKLDAPPAIHVYGNAAVAEFDWHFTAVRRDNGQTQHTTGRESQVWAKIPNTGWRIVH VHYSGPAKTGVGEGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19220; Mature: 19220
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKTSLLFSAAAITLTLMASSASAATPTAAQNEATSTVKQEITEGINRYLYSIDKADPTL CCCHHHHHHHHHHEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC GKQLFYVSPETSFIHPRGHERGWSQIAENFYGTTMGKTFSKRTLKLDAPPAIHVYGNAAV CCEEEEECCCCCEECCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEEEECCEEE AEFDWHFTAVRRDNGQTQHTTGRESQVWAKIPNTGWRIVHVHYSGPAKTGVGEGY EEECEEEEEEECCCCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCC >Mature Secondary Structure MQKTSLLFSAAAITLTLMASSASAATPTAAQNEATSTVKQEITEGINRYLYSIDKADPTL CCCHHHHHHHHHHEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC GKQLFYVSPETSFIHPRGHERGWSQIAENFYGTTMGKTFSKRTLKLDAPPAIHVYGNAAV CCEEEEECCCCCEECCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEEEECCEEE AEFDWHFTAVRRDNGQTQHTTGRESQVWAKIPNTGWRIVHVHYSGPAKTGVGEGY EEECEEEEEEECCCCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA