| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
Click here to switch to the map view.
The map label for this gene is ispH [H]
Identifier: 194735346
GI number: 194735346
Start: 57800
End: 58750
Strand: Direct
Name: ispH [H]
Synonym: SeSA_A0054
Alternate gene names: 194735346
Gene position: 57800-58750 (Clockwise)
Preceding gene: 194737896
Following gene: 194734594
Centisome position: 1.23
GC content: 57.62
Gene sequence:
>951_bases ATGCAGATCCTGTTGGCCAACCCACGCGGTTTTTGCGCCGGGGTAGACCGCGCTATCAGCATTGTTGAAAATGCGCTCGC CATTTACGGCGCGCCAATTTACGTTCGGCACGAAGTCGTGCATAACCGCTATGTAGTGGACAGCCTGCGCAAGCGCGGGG CGATCTTTATAGAACAAATTAGCGAAGTGCCGGATGGCGCCATTCTGATCTTCTCCGCTCATGGGGTTTCCCAGGCGGTG CGTAACGAGGCGAAAAGCCGCGATCTTACCGTTTTTGACGCCACCTGCCCGCTGGTGACGAAAGTCCATATGGAAGTGGC GCGCGCCAGCCGTCGCGGTGAAGAGTCTATTCTCATCGGCCACGCCGGGCACCCGGAAGTGGAAGGCACCATGGGCCAGT ACAGCAACCCGGAAGGGGGGATGTACCTGGTTGAGTCGCCAGAGGACGTCTGGACGCTGAATGTCAAAAATGAAGGCAAG CTCTCCTTCATGACGCAAACCACGCTTTCCGTGGACGATACGTCCGATGTGATTGATGCGCTGCGTAAACGCTTTCCGAA AATCGTCGGCCCGCGCAAAGACGATATTTGCTATGCCACTACTAATCGTCAGGAAGCGGTGCGGGCGCTGGCGGAGCAGG CTGACGTGGTGCTGGTGGTCGGCTCGAAAAACTCTTCTAACTCTAACCGGCTGGCGGAACTGGCCCAACGGATGGGAAGA ACCGCGTTTCTTATCGACGATGCGACGGATATCCAGGAGGCGTGGGTGAAAGACGCCGCCTGCGTCGGCGTCACCGCTGG CGCTTCCGCGCCGGATATTCTGGTGCAGAATGTTATTGCGCGTCTGCGCGAGTTTGGCGGCGGCGAAGCTGTCACGCTTG AGGGGCGCGAAGAAAATATTGTTTTCGAAGTGCCGAAAGAGCTGCGTGTGGATGTTCGTGAGGTCGAATAA
Upstream 100 bases:
>100_bases GCGACTCGATTACCGTTGATTTTAACCATCCGCTGGCCGGGCATACCGTTCACTTTGATATTGAAGTGCTGGAAATCGAT CCGGCGCTGGAGGCATAAAC
Downstream 100 bases:
>100_bases GATTTCACAATTCAGAAATCTGCCTGATGACGCTACGTTGACCAGATCTTAAGAATTTCTTTTGATATTCAATGTGCGAC AGGAAGAATAAGGCGTAGTC
Product: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MQILLANPRGFCAGVDRAISIVENALAIYGAPIYVRHEVVHNRYVVDSLRKRGAIFIEQISEVPDGAILIFSAHGVSQAV RNEAKSRDLTVFDATCPLVTKVHMEVARASRRGEESILIGHAGHPEVEGTMGQYSNPEGGMYLVESPEDVWTLNVKNEGK LSFMTQTTLSVDDTSDVIDALRKRFPKIVGPRKDDICYATTNRQEAVRALAEQADVVLVVGSKNSSNSNRLAELAQRMGR TAFLIDDATDIQEAWVKDAACVGVTAGASAPDILVQNVIARLREFGGGEAVTLEGREENIVFEVPKELRVDVREVE
Sequences:
>Translated_316_residues MQILLANPRGFCAGVDRAISIVENALAIYGAPIYVRHEVVHNRYVVDSLRKRGAIFIEQISEVPDGAILIFSAHGVSQAV RNEAKSRDLTVFDATCPLVTKVHMEVARASRRGEESILIGHAGHPEVEGTMGQYSNPEGGMYLVESPEDVWTLNVKNEGK LSFMTQTTLSVDDTSDVIDALRKRFPKIVGPRKDDICYATTNRQEAVRALAEQADVVLVVGSKNSSNSNRLAELAQRMGR TAFLIDDATDIQEAWVKDAACVGVTAGASAPDILVQNVIARLREFGGGEAVTLEGREENIVFEVPKELRVDVREVE >Mature_316_residues MQILLANPRGFCAGVDRAISIVENALAIYGAPIYVRHEVVHNRYVVDSLRKRGAIFIEQISEVPDGAILIFSAHGVSQAV RNEAKSRDLTVFDATCPLVTKVHMEVARASRRGEESILIGHAGHPEVEGTMGQYSNPEGGMYLVESPEDVWTLNVKNEGK LSFMTQTTLSVDDTSDVIDALRKRFPKIVGPRKDDICYATTNRQEAVRALAEQADVVLVVGSKNSSNSNRLAELAQRMGR TAFLIDDATDIQEAWVKDAACVGVTAGASAPDILVQNVIARLREFGGGEAVTLEGREENIVFEVPKELRVDVREVE
Specific function: Converts 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP) [H]
COG id: COG0761
COG function: function code IM; Penicillin tolerance protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ispH family [H]
Homologues:
Organism=Escherichia coli, GI1786212, Length=316, Percent_Identity=93.3544303797468, Blast_Score=610, Evalue=1e-176,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003451 [H]
Pfam domain/function: PF02401 LYTB [H]
EC number: =1.17.1.2 [H]
Molecular weight: Translated: 34544; Mature: 34544
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQILLANPRGFCAGVDRAISIVENALAIYGAPIYVRHEVVHNRYVVDSLRKRGAIFIEQI CEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCHHHHHH SEVPDGAILIFSAHGVSQAVRNEAKSRDLTVFDATCPLVTKVHMEVARASRRGEESILIG HHCCCCEEEEEECCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEE HAGHPEVEGTMGQYSNPEGGMYLVESPEDVWTLNVKNEGKLSFMTQTTLSVDDTSDVIDA CCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCEEEEEEEEEECCCHHHHHHH LRKRFPKIVGPRKDDICYATTNRQEAVRALAEQADVVLVVGSKNSSNSNRLAELAQRMGR HHHHCHHHCCCCCCCEEEEECCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCC TAFLIDDATDIQEAWVKDAACVGVTAGASAPDILVQNVIARLREFGGGEAVTLEGREENI EEEEEECCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCE VFEVPKELRVDVREVE EEECCHHHCCHHHCCC >Mature Secondary Structure MQILLANPRGFCAGVDRAISIVENALAIYGAPIYVRHEVVHNRYVVDSLRKRGAIFIEQI CEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCHHHHHH SEVPDGAILIFSAHGVSQAVRNEAKSRDLTVFDATCPLVTKVHMEVARASRRGEESILIG HHCCCCEEEEEECCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEE HAGHPEVEGTMGQYSNPEGGMYLVESPEDVWTLNVKNEGKLSFMTQTTLSVDDTSDVIDA CCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCEEEEEEEEEECCCHHHHHHH LRKRFPKIVGPRKDDICYATTNRQEAVRALAEQADVVLVVGSKNSSNSNRLAELAQRMGR HHHHCHHHCCCCCCCEEEEECCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCC TAFLIDDATDIQEAWVKDAACVGVTAGASAPDILVQNVIARLREFGGGEAVTLEGREENI EEEEEECCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCE VFEVPKELRVDVREVE EEECCHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA