| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
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The map label for this gene is yjjA [H]
Identifier: 194735148
GI number: 194735148
Start: 4658656
End: 4659147
Strand: Reverse
Name: yjjA [H]
Synonym: SeSA_A4796
Alternate gene names: 194735148
Gene position: 4659147-4658656 (Counterclockwise)
Preceding gene: 194734923
Following gene: 194735978
Centisome position: 98.94
GC content: 54.88
Gene sequence:
>492_bases ATGAATACAGCGAAACATGTTCTGTGCTGCGCGGCAGTCGCCTGCGTACTGATTTCCACCAGCGGTATCGCCGCCTCCTG GCAGGATTCGCTTTCCAGCGCCGCCAGTCAGTTAAGCGCTCAGGGCACGAACTCACAGCAGGGCGGGATGTCGCTTTCGG CGCTAACCGGTCTGCTCAGCAACGGCGCCCAGTCGCTCAGCGCCGATAATATGAATAATGCCGCCGGTATTTTGCAGTAC TGCGCCAAACAGAAGCTGGCGTCCGCTACCAACGTGGAAAACGTTAAAAATCAGATTCTGAACAAGTTGGGGTTGGATAC TACACAGCAGGAGCAGGACACTAACTACCTGAACGGCCTGCAAGGGTTGCTCAAGACGAAGGACGGCCAGCAGTTGAACC TCAATAATATCGGCAGTACGCCGCTGGCGGAAAAGGTGAAAACCAAAGCTTGCGATCTGGTGTTGCAGCAAGGGCTGAAT TTCCTCTCCTGA
Upstream 100 bases:
>100_bases CTGGGACAGTTACCGCAGCCGGGTGACGGGTAAAGAGTATTAAATTGCAACGTGCGCCAGGGCGATACAACGCCTGGCTG GCATAACACAGGTGATTACC
Downstream 100 bases:
>100_bases CTGCGCTTTTCTGACCGTGCGCCACGCCGGGACGCCCTGTTAAAAGCCGTGTTTTGGCCCTTTACCCGCCAGCACGGCAT TAACCCGACTTTTCCTTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: Protein P-18 [H]
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MNTAKHVLCCAAVACVLISTSGIAASWQDSLSSAASQLSAQGTNSQQGGMSLSALTGLLSNGAQSLSADNMNNAAGILQY CAKQKLASATNVENVKNQILNKLGLDTTQQEQDTNYLNGLQGLLKTKDGQQLNLNNIGSTPLAEKVKTKACDLVLQQGLN FLS
Sequences:
>Translated_163_residues MNTAKHVLCCAAVACVLISTSGIAASWQDSLSSAASQLSAQGTNSQQGGMSLSALTGLLSNGAQSLSADNMNNAAGILQY CAKQKLASATNVENVKNQILNKLGLDTTQQEQDTNYLNGLQGLLKTKDGQQLNLNNIGSTPLAEKVKTKACDLVLQQGLN FLS >Mature_163_residues MNTAKHVLCCAAVACVLISTSGIAASWQDSLSSAASQLSAQGTNSQQGGMSLSALTGLLSNGAQSLSADNMNNAAGILQY CAKQKLASATNVENVKNQILNKLGLDTTQQEQDTNYLNGLQGLLKTKDGQQLNLNNIGSTPLAEKVKTKACDLVLQQGLN FLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082434, Length=163, Percent_Identity=72.3926380368098, Blast_Score=240, Evalue=4e-65,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019637 [H]
Pfam domain/function: PF10696 DUF2501 [H]
EC number: NA
Molecular weight: Translated: 16958; Mature: 16958
Theoretical pI: Translated: 7.83; Mature: 7.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTAKHVLCCAAVACVLISTSGIAASWQDSLSSAASQLSAQGTNSQQGGMSLSALTGLLS CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH NGAQSLSADNMNNAAGILQYCAKQKLASATNVENVKNQILNKLGLDTTQQEQDTNYLNGL HHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH QGLLKTKDGQQLNLNNIGSTPLAEKVKTKACDLVLQQGLNFLS HHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNTAKHVLCCAAVACVLISTSGIAASWQDSLSSAASQLSAQGTNSQQGGMSLSALTGLLS CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH NGAQSLSADNMNNAAGILQYCAKQKLASATNVENVKNQILNKLGLDTTQQEQDTNYLNGL HHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH QGLLKTKDGQQLNLNNIGSTPLAEKVKTKACDLVLQQGLNFLS HHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2844800; 7610040; 9278503 [H]