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The map label for this gene is ytfE [H]

Identifier: 194735143

GI number: 194735143

Start: 4535315

End: 4535977

Strand: Reverse

Name: ytfE [H]

Synonym: SeSA_A4667

Alternate gene names: 194735143

Gene position: 4535977-4535315 (Counterclockwise)

Preceding gene: 194735952

Following gene: 194737359

Centisome position: 96.32

GC content: 55.2

Gene sequence:

>663_bases
ATGGCTTATCGCGATCAACCTTTAGGCGAACTGGCGCTCTCTATTCCCCGCGCATCGGCGCTGTTTCGCCAGTACGATAT
GGATTACTGCTGCGGCGGAAAACAGACGCTGGCGCGCGCCGCCGCGCGTCACGACGTCGATATTGACATCATTGAAGCGC
AACTCGCGCAGTTGGCTGAACAGCCCATCGAAAAAGACTGGCGCGCCGTTCCGCTGGCGGACATTATTGACCATATCGTG
GTGCGCTATCATGATCGACACCGCGAACAACTGCCGGAGCTTATCCTGCAGGCAACCAAAGTGGAACGCGTTCACGCGGA
TAAGCCAAACGTCCCACGCGGCCTGACAAAATATCTCACCGCGCTGCATGAAGAGCTTTCCAGCCATATGATGAAAGAAG
AACAGATCCTGTTCCCCATGATCAAACAGGGTATGGGTCGCCAGGCAACGGGCCCGATAAGCGTAATGGAAATCGAGCAT
GACGAGGCGGGAGAGCTGGTAGACGTCATCAAACACGTCACCCAAAATGTAACGCCGCCGCCAGAAGCCTGCACCACCTG
GAAAGCGATGTATAACGGCATTAATGAGATGATTGATGATCTGATGGAGCACATCAGCCTGGAGAATAACGTGCTGTTCC
CACGCGCGCTGGCCGGGGAATAA

Upstream 100 bases:

>100_bases
TCATCCTGGCTTAAATTATACGCACCCCGAAAGAGTTATAGCCTCGCCTTAAAGATGCATTTAAAATACAACTTATATTA
TTGCAAATGAGGTAACGGCA

Downstream 100 bases:

>100_bases
TCGCCAGCCAGGCATTTTGCCGGGTGGCGGCTGTAAACCGCGCCTTATCCGGCCTACAAATCAACGCTACGCTGTAAGCC
CGGTAAGCGCCAGCGCTACC

Product: iron-sulfur cluster repair di-iron protein

Products: NA

Alternate protein names: RCMNS [H]

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MAYRDQPLGELALSIPRASALFRQYDMDYCCGGKQTLARAAARHDVDIDIIEAQLAQLAEQPIEKDWRAVPLADIIDHIV
VRYHDRHREQLPELILQATKVERVHADKPNVPRGLTKYLTALHEELSSHMMKEEQILFPMIKQGMGRQATGPISVMEIEH
DEAGELVDVIKHVTQNVTPPPEACTTWKAMYNGINEMIDDLMEHISLENNVLFPRALAGE

Sequences:

>Translated_220_residues
MAYRDQPLGELALSIPRASALFRQYDMDYCCGGKQTLARAAARHDVDIDIIEAQLAQLAEQPIEKDWRAVPLADIIDHIV
VRYHDRHREQLPELILQATKVERVHADKPNVPRGLTKYLTALHEELSSHMMKEEQILFPMIKQGMGRQATGPISVMEIEH
DEAGELVDVIKHVTQNVTPPPEACTTWKAMYNGINEMIDDLMEHISLENNVLFPRALAGE
>Mature_219_residues
AYRDQPLGELALSIPRASALFRQYDMDYCCGGKQTLARAAARHDVDIDIIEAQLAQLAEQPIEKDWRAVPLADIIDHIVV
RYHDRHREQLPELILQATKVERVHADKPNVPRGLTKYLTALHEELSSHMMKEEQILFPMIKQGMGRQATGPISVMEIEHD
EAGELVDVIKHVTQNVTPPPEACTTWKAMYNGINEMIDDLMEHISLENNVLFPRALAGE

Specific function: Involved in anaerobic NO protection [H]

COG id: COG2846

COG function: function code D; Regulator of cell morphogenesis and NO signaling

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790654, Length=220, Percent_Identity=88.6363636363636, Blast_Score=418, Evalue=1e-118,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007500
- InterPro:   IPR019903
- InterPro:   IPR012312 [H]

Pfam domain/function: PF01814 Hemerythrin; PF04405 ScdA_N [H]

EC number: NA

Molecular weight: Translated: 24937; Mature: 24806

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYRDQPLGELALSIPRASALFRQYDMDYCCGGKQTLARAAARHDVDIDIIEAQLAQLAE
CCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH
QPIEKDWRAVPLADIIDHIVVRYHDRHREQLPELILQATKVERVHADKPNVPRGLTKYLT
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
ALHEELSSHMMKEEQILFPMIKQGMGRQATGPISVMEIEHDEAGELVDVIKHVTQNVTPP
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCC
PEACTTWKAMYNGINEMIDDLMEHISLENNVLFPRALAGE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCC
>Mature Secondary Structure 
AYRDQPLGELALSIPRASALFRQYDMDYCCGGKQTLARAAARHDVDIDIIEAQLAQLAE
CCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH
QPIEKDWRAVPLADIIDHIVVRYHDRHREQLPELILQATKVERVHADKPNVPRGLTKYLT
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
ALHEELSSHMMKEEQILFPMIKQGMGRQATGPISVMEIEHDEAGELVDVIKHVTQNVTPP
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCC
PEACTTWKAMYNGINEMIDDLMEHISLENNVLFPRALAGE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA