| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
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The map label for this gene is 194735015
Identifier: 194735015
GI number: 194735015
Start: 4370811
End: 4371737
Strand: Direct
Name: 194735015
Synonym: SeSA_A4509
Alternate gene names: NA
Gene position: 4370811-4371737 (Clockwise)
Preceding gene: 194734208
Following gene: 194735425
Centisome position: 92.82
GC content: 35.81
Gene sequence:
>927_bases GTGACAACCTATTATAACATCAGTAAATATCGTGAAATGATTGATGGCGTAAATCTGGAGAAAGAGTTTTATAAAAAGAT GCTGGAAACTTTTTCGCTGTTGGTATCTTCCGGTGTAGCGATGCAATCTGATATGCGTAAAGTACAAGTATCTATCGATG CATTAAATACCCGAAGCATTATGTATCAGTCGATGTTGGATGATGAAATGTATAAAATGCAGAATATGACTGGTCTGAAT TTATCACCAGTTCAGATTCAAAGCGATGAAAAATTCAACCTCTTCAAAAAATATATCTTTGTCGAAAGTCCTGAAAAACT TATGGACATGGTGATGAAATACAATGATGACTATAAGATGCTTGTCAATACCCGAAAAGCCGCGACCGAAGATATTAATG CCGCAAAATCATCCTATTTTCCGACTGTAGATCTCGTTTCCAGCTATGTACAGAATAACCCGAGCGGTAGTGCCAAAAAA AGTGATTATGAAGATGAATTCAAAACGGGTATCAATGTCAGTTTCAACATTTTTAATGGGTTCAGAAATTCAGCCCAGGA AAGAAAAATGGTGGCAAGTTACTCGCAGGCTAAGCTGCAAATTGACGATTTTTTGATTAAAACGCGTTATAACATTGATT CACAACTTTCAAGATACGCCGCTGCAAAAGAGACTTACTCAGTGGCGGAACGTTCACATACAAACGCGTTACAGCTTACT GAATTATATGAGCAGGAGTTTCAGTTAGGGCAAAAAAGTTTGCTTGATTTAATTTCAAGCCGTAATGAAGCATTTCAGGC ATATGTAAGCATGATCGACAGCAAATATAGCCTGTATATTTTAAAGTTACAGCAACTCTCATTGATTTTTCATTTAATGG ATTATTTAAAAGGAAATACTGAAAGTGAGTTAAATGTAATGAAATGA
Upstream 100 bases:
>100_bases CTTTGGAGTGAGGGGGGCTAATATCAGGAAATCTGAATACGAAAGAGATAATAGTAAAACTGACTATGAAAAAACAAAGA ATATAGTGTCTCAGGAGGTT
Downstream 100 bases:
>100_bases ATAGAAGACAAAGCGATCATCTCATGATGATAATTATTTCTTTGACGATCTTAATTATTATCCTTACCTACTTTATAGAA ATTAATTCAGTGGTTCATGG
Product: putative ABC exporter outer membrane component
Products: NA
Alternate protein names: ABC Transporter Outer Membrane Protein; Type I Transport System Outer Membrane Efflux Protein
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MTTYYNISKYREMIDGVNLEKEFYKKMLETFSLLVSSGVAMQSDMRKVQVSIDALNTRSIMYQSMLDDEMYKMQNMTGLN LSPVQIQSDEKFNLFKKYIFVESPEKLMDMVMKYNDDYKMLVNTRKAATEDINAAKSSYFPTVDLVSSYVQNNPSGSAKK SDYEDEFKTGINVSFNIFNGFRNSAQERKMVASYSQAKLQIDDFLIKTRYNIDSQLSRYAAAKETYSVAERSHTNALQLT ELYEQEFQLGQKSLLDLISSRNEAFQAYVSMIDSKYSLYILKLQQLSLIFHLMDYLKGNTESELNVMK
Sequences:
>Translated_308_residues MTTYYNISKYREMIDGVNLEKEFYKKMLETFSLLVSSGVAMQSDMRKVQVSIDALNTRSIMYQSMLDDEMYKMQNMTGLN LSPVQIQSDEKFNLFKKYIFVESPEKLMDMVMKYNDDYKMLVNTRKAATEDINAAKSSYFPTVDLVSSYVQNNPSGSAKK SDYEDEFKTGINVSFNIFNGFRNSAQERKMVASYSQAKLQIDDFLIKTRYNIDSQLSRYAAAKETYSVAERSHTNALQLT ELYEQEFQLGQKSLLDLISSRNEAFQAYVSMIDSKYSLYILKLQQLSLIFHLMDYLKGNTESELNVMK >Mature_307_residues TTYYNISKYREMIDGVNLEKEFYKKMLETFSLLVSSGVAMQSDMRKVQVSIDALNTRSIMYQSMLDDEMYKMQNMTGLNL SPVQIQSDEKFNLFKKYIFVESPEKLMDMVMKYNDDYKMLVNTRKAATEDINAAKSSYFPTVDLVSSYVQNNPSGSAKKS DYEDEFKTGINVSFNIFNGFRNSAQERKMVASYSQAKLQIDDFLIKTRYNIDSQLSRYAAAKETYSVAERSHTNALQLTE LYEQEFQLGQKSLLDLISSRNEAFQAYVSMIDSKYSLYILKLQQLSLIFHLMDYLKGNTESELNVMK
Specific function: Unknown
COG id: COG1538
COG function: function code MU; Outer membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35713; Mature: 35582
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTYYNISKYREMIDGVNLEKEFYKKMLETFSLLVSSGVAMQSDMRKVQVSIDALNTRSI CCCEECHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH MYQSMLDDEMYKMQNMTGLNLSPVQIQSDEKFNLFKKYIFVESPEKLMDMVMKYNDDYKM HHHHHHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCHHE LVNTRKAATEDINAAKSSYFPTVDLVSSYVQNNPSGSAKKSDYEDEFKTGINVSFNIFNG EHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCEEEEEHHH FRNSAQERKMVASYSQAKLQIDDFLIKTRYNIDSQLSRYAAAKETYSVAERSHTNALQLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH ELYEQEFQLGQKSLLDLISSRNEAFQAYVSMIDSKYSLYILKLQQLSLIFHLMDYLKGNT HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHCCCC ESELNVMK CCCCCCCC >Mature Secondary Structure TTYYNISKYREMIDGVNLEKEFYKKMLETFSLLVSSGVAMQSDMRKVQVSIDALNTRSI CCEECHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH MYQSMLDDEMYKMQNMTGLNLSPVQIQSDEKFNLFKKYIFVESPEKLMDMVMKYNDDYKM HHHHHHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCHHE LVNTRKAATEDINAAKSSYFPTVDLVSSYVQNNPSGSAKKSDYEDEFKTGINVSFNIFNG EHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCEEEEEHHH FRNSAQERKMVASYSQAKLQIDDFLIKTRYNIDSQLSRYAAAKETYSVAERSHTNALQLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH ELYEQEFQLGQKSLLDLISSRNEAFQAYVSMIDSKYSLYILKLQQLSLIFHLMDYLKGNT HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHCCCC ESELNVMK CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA