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The map label for this gene is ybbN [H]

Identifier: 194734988

GI number: 194734988

Start: 572253

End: 573134

Strand: Reverse

Name: ybbN [H]

Synonym: SeSA_A0568

Alternate gene names: 194734988

Gene position: 573134-572253 (Counterclockwise)

Preceding gene: 194734331

Following gene: 194735607

Centisome position: 12.17

GC content: 54.88

Gene sequence:

>882_bases
GTGACACAGACAAAAGAGAGCGACGCCATGTCCGTACAGAACATTGTCAATATTAATGAATCCAACCTGCAGCAGACCTT
AGAGCAGTCCATGACCACGCCGGTACTGTTCTATTTCTGGTCTGAACGCAGCCAACACTGTCTGCAATTAACGCCAGTGC
TGGAAAGTCTGGCTGCCCAGTACCACGGTCAGTTTATTCTGGCAAAGCTGGACTGCGACGCCGAACAGATGATCGCCGCT
CAGTTTGGTCTGCGCGCCATCCCGACAGTCTATCTGTTCCAGAATGGCCAACCGGTCGATGGTTTCCAGGGACCGCAGCC
GGAAGAGGCGATCCGCGCTCTGCTGGATAAAGTACTGCCGCGTGAAGAAGAGCTAAAAGCGCAACAAGCGATGCAGTTAA
TGCAGGAGGGCAACTACATTGACGCGCTGCCGTTGCTCAAAGACGCCTGGCAGCTCTCTTCGCAGAACAGTGAGATTGGC
CTGTTACTGGCGGAAGCGCAAATTGCGCTGAACCGCTCTGAAGAGGCCGAAGCGGTATTAAAAACTATCCCGCTACAGGA
TCAGGATACCCGTTATCAGGGGCTGGTTGCGCAGATCGAACTGCTTAAACAGGCGGCGGATACGCCGGAAATTCAGCAAC
TTCAGCAGCAAGTCGCGGAGAATCCGCAGGATGCGGCTTTGGCAACGCAACTAGCGTTGCAGTTGCACCAGGTCGGACGT
AATGAAGAAGCGCTGGAATTGCTGTTCAGCCATCTGAGAAAAGATCTTGCCGCCGCCGAGGGACAGATGCGCAAAACCTT
CCAGGAGATCCTTGCCGCGCTCGGCACCGGCGATGCGCTGGCGTCGAAATACCGCCGCCAGTTGTACGCGCTACTGTATT
AA

Upstream 100 bases:

>100_bases
CCTGGGCAGTGATGGCGCTGAAACGCCTATTGCCGGGCCGGATGCTGGATAAAATTTTACAAAGCTGAGTTGAAGCGCGC
CCGTCAGCCCCCATGTAAAC

Downstream 100 bases:

>100_bases
TCCTCTCTTGCCTGATGGCGCGCTTATCTGGCCTACCTGTCGTCCTCAGGCCGGATAAGGCGCTTGCGCCATCATCCGGC
AACTATCATGATTTCTTGAG

Product: thioredoxin domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MTQTKESDAMSVQNIVNINESNLQQTLEQSMTTPVLFYFWSERSQHCLQLTPVLESLAAQYHGQFILAKLDCDAEQMIAA
QFGLRAIPTVYLFQNGQPVDGFQGPQPEEAIRALLDKVLPREEELKAQQAMQLMQEGNYIDALPLLKDAWQLSSQNSEIG
LLLAEAQIALNRSEEAEAVLKTIPLQDQDTRYQGLVAQIELLKQAADTPEIQQLQQQVAENPQDAALATQLALQLHQVGR
NEEALELLFSHLRKDLAAAEGQMRKTFQEILAALGTGDALASKYRRQLYALLY

Sequences:

>Translated_293_residues
MTQTKESDAMSVQNIVNINESNLQQTLEQSMTTPVLFYFWSERSQHCLQLTPVLESLAAQYHGQFILAKLDCDAEQMIAA
QFGLRAIPTVYLFQNGQPVDGFQGPQPEEAIRALLDKVLPREEELKAQQAMQLMQEGNYIDALPLLKDAWQLSSQNSEIG
LLLAEAQIALNRSEEAEAVLKTIPLQDQDTRYQGLVAQIELLKQAADTPEIQQLQQQVAENPQDAALATQLALQLHQVGR
NEEALELLFSHLRKDLAAAEGQMRKTFQEILAALGTGDALASKYRRQLYALLY
>Mature_292_residues
TQTKESDAMSVQNIVNINESNLQQTLEQSMTTPVLFYFWSERSQHCLQLTPVLESLAAQYHGQFILAKLDCDAEQMIAAQ
FGLRAIPTVYLFQNGQPVDGFQGPQPEEAIRALLDKVLPREEELKAQQAMQLMQEGNYIDALPLLKDAWQLSSQNSEIGL
LLAEAQIALNRSEEAEAVLKTIPLQDQDTRYQGLVAQIELLKQAADTPEIQQLQQQVAENPQDAALATQLALQLHQVGRN
EEALELLFSHLRKDLAAAEGQMRKTFQEILAALGTGDALASKYRRQLYALLY

Specific function: Unknown

COG id: COG3118

COG function: function code O; Thioredoxin domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Escherichia coli, GI87081747, Length=284, Percent_Identity=94.3661971830986, Blast_Score=541, Evalue=1e-155,
Organism=Escherichia coli, GI1788936, Length=105, Percent_Identity=29.5238095238095, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005746
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR013766
- InterPro:   IPR012335
- InterPro:   IPR011990 [H]

Pfam domain/function: PF00085 Thioredoxin [H]

EC number: NA

Molecular weight: Translated: 32821; Mature: 32690

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQTKESDAMSVQNIVNINESNLQQTLEQSMTTPVLFYFWSERSQHCLQLTPVLESLAAQ
CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHH
YHGQFILAKLDCDAEQMIAAQFGLRAIPTVYLFQNGQPVDGFQGPQPEEAIRALLDKVLP
HCCCEEEEEECCCHHHHHHHHHCHHHCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCC
REEELKAQQAMQLMQEGNYIDALPLLKDAWQLSSQNSEIGLLLAEAQIALNRSEEAEAVL
CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEEEEHHHHHHCCCHHHHHHH
KTIPLQDQDTRYQGLVAQIELLKQAADTPEIQQLQQQVAENPQDAALATQLALQLHQVGR
HHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
NEEALELLFSHLRKDLAAAEGQMRKTFQEILAALGTGDALASKYRRQLYALLY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TQTKESDAMSVQNIVNINESNLQQTLEQSMTTPVLFYFWSERSQHCLQLTPVLESLAAQ
CCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHH
YHGQFILAKLDCDAEQMIAAQFGLRAIPTVYLFQNGQPVDGFQGPQPEEAIRALLDKVLP
HCCCEEEEEECCCHHHHHHHHHCHHHCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCC
REEELKAQQAMQLMQEGNYIDALPLLKDAWQLSSQNSEIGLLLAEAQIALNRSEEAEAVL
CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEEEEHHHHHHCCCHHHHHHH
KTIPLQDQDTRYQGLVAQIELLKQAADTPEIQQLQQQVAENPQDAALATQLALQLHQVGR
HHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
NEEALELLFSHLRKDLAAAEGQMRKTFQEILAALGTGDALASKYRRQLYALLY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]