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The map label for this gene is yadH [H]

Identifier: 194734862

GI number: 194734862

Start: 202000

End: 202770

Strand: Direct

Name: yadH [H]

Synonym: SeSA_A0192

Alternate gene names: 194734862

Gene position: 202000-202770 (Clockwise)

Preceding gene: 194738046

Following gene: 194737954

Centisome position: 4.29

GC content: 54.09

Gene sequence:

>771_bases
ATGATGCAGCTTTACTGGGTTGCCCTTAAAAGCATCTGGGCGAAAGAGATCCACCGCTTTATGCGGATCTGGGTGCAAAC
GCTAGTGCCGCCTGTCATCACGATGACGCTCTATTTTATTATTTTCGGTAACCTGATCGGTTCGCGCATCGGCGAAATGC
ATGGTTTTAGCTATATGCAATTTATTGTGCCGGGCCTGATTATGATGGCGGTTATTACTAACTCCTACGCGAATGTCGCG
TCGTCATTTTTTAGCGCCAAGTTTCAGCGCAATATTGAGGAACTGCTGGTCGCGCCGGTACCAACGCACGTGATTATCGC
CGGATTTGTCGGCGGCGGCGTGGCGCGCGGGCTGTGCGTGGGGATTCTGGTGACGGCGATTTCGCTCTTTTTTGTGCCTT
TCCAGGTGCATTCCTGGGTATTTGTCGCGCTAACGCTGATTCTGACCGCGATTCTGTTCTCGCTGGCCGGACTGCTGAAC
GCCGTGTTTGCGAAAACCTTTGACGATATCAGCCTGATCCCGACCTTTGTGCTGACGCCGCTGACCTACCTCGGCGGGGT
ATTTTACTCGCTGACGCTGCTGCCGCCGTTCTGGCAAGGGTTGTCGCACCTGAACCCGATCGTCTACATGATCAGCGGCT
TCCGTTATGGTTTCCTGGGTATCCATGATGTGCCGCTGGTCACCACATTTGGCGTACTGGTGATCTTTATCGCCGCTTTC
TACCTGCTGTGCTGGTCGCTGATCCAGCGTGGGCGCGGTTTGCGCAGTTAA

Upstream 100 bases:

>100_bases
TGAGCGAGCAGGGGGTTCAGGTATTAAGTATGCGTAATAAAGCCAACCGTCTGGAAGAACTGTTTGTGTCGCTGGTGCAT
GAAAAACAAGGAGATCGCGC

Downstream 100 bases:

>100_bases
GTGTTGACAGGGGAGATGGGGCGTTGGGTTGCACTTCGCTTCACCCCATCTACGGGGCCGTAATATCAATGGGTTACGGG
TCTGTAGGGGGAGGCTTGCT

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MMQLYWVALKSIWAKEIHRFMRIWVQTLVPPVITMTLYFIIFGNLIGSRIGEMHGFSYMQFIVPGLIMMAVITNSYANVA
SSFFSAKFQRNIEELLVAPVPTHVIIAGFVGGGVARGLCVGILVTAISLFFVPFQVHSWVFVALTLILTAILFSLAGLLN
AVFAKTFDDISLIPTFVLTPLTYLGGVFYSLTLLPPFWQGLSHLNPIVYMISGFRYGFLGIHDVPLVTTFGVLVIFIAAF
YLLCWSLIQRGRGLRS

Sequences:

>Translated_256_residues
MMQLYWVALKSIWAKEIHRFMRIWVQTLVPPVITMTLYFIIFGNLIGSRIGEMHGFSYMQFIVPGLIMMAVITNSYANVA
SSFFSAKFQRNIEELLVAPVPTHVIIAGFVGGGVARGLCVGILVTAISLFFVPFQVHSWVFVALTLILTAILFSLAGLLN
AVFAKTFDDISLIPTFVLTPLTYLGGVFYSLTLLPPFWQGLSHLNPIVYMISGFRYGFLGIHDVPLVTTFGVLVIFIAAF
YLLCWSLIQRGRGLRS
>Mature_256_residues
MMQLYWVALKSIWAKEIHRFMRIWVQTLVPPVITMTLYFIIFGNLIGSRIGEMHGFSYMQFIVPGLIMMAVITNSYANVA
SSFFSAKFQRNIEELLVAPVPTHVIIAGFVGGGVARGLCVGILVTAISLFFVPFQVHSWVFVALTLILTAILFSLAGLLN
AVFAKTFDDISLIPTFVLTPLTYLGGVFYSLTLLPPFWQGLSHLNPIVYMISGFRYGFLGIHDVPLVTTFGVLVIFIAAF
YLLCWSLIQRGRGLRS

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786320, Length=256, Percent_Identity=94.140625, Blast_Score=485, Evalue=1e-138,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 28557; Mature: 28557

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHCCCCCC
>Mature Secondary Structure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HHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]