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The map label for this gene is yadE [H]

Identifier: 194734707

GI number: 194734707

Start: 208696

End: 209925

Strand: Direct

Name: yadE [H]

Synonym: SeSA_A0199

Alternate gene names: 194734707

Gene position: 208696-209925 (Clockwise)

Preceding gene: 194736710

Following gene: 194734924

Centisome position: 4.43

GC content: 50.08

Gene sequence:

>1230_bases
ATGGTTATGCGCGTTGTTCTTATCTTGCTGTTCTTTTTCTCCGGTAATGTGTTGGCTGCCTTGCCCGCTCGTTATATGCA
AACGACGAAAGACGCCGCCATCTGGTCGCAGATTGGCGATAAAATGGTGACCGTAGGGAATATCCGCGCCGGACAAATTC
TTTCCGTAACGCCTGTTGCGGCTGATTATTATGCCTTTAAATTCGGCTTCGGCGAGGGGTTTATCGATAAAGACCATCTG
GAACCTGTGCAGGGAAAACAAAAAGTGGAAGATGGCCTGGGCGATCTTAACAAGCCGCTCAGCAATCAGAATCTGGTGAC
CTGGAAGGACACGCCGGTGTATAACGCGCCGGACATCAGTAGCGCCCCGTTTGGCGTATTGGTGGACAACTTGCGTTACC
CCATTATTAGTAAGCTGAAAGGCAGGCTACATCAAACCTGGTATCAGATCCGTATTGGCGACAGGCTGGCTTATGTCAGC
GCCATGGATGCGCAGGAAGACAACGGCATTCCGATTTTGACCTATCATCACATCTTACGTGATGAAGAGAATACCCGTTT
TCGCCATACGTCCACCACGACTTCGGTTCGGGCATTCAGCAACCAAATGACCTGGCTTCGCGATCGCGGCTATGCCACGT
TGACGATGTACCAACTGGAGGATTACATCCATAACCGCGCGAATTTCCCGGCGCGCGCGGTGGCTATCACCTTTGATGAT
GGCCTTAAATCAGTGAGTCGCTATGCGTATCCGGTATTAAAGCAGTACGATATGAAAGCGACGGCATTTATTATTTCATC
GCGTATTAAGCGCCATCCGCAAAAATGGAATCCCAGGTCGCTGCAATTTATGAGCGTGTCCGAATTGCGCAAGATAAGCG
ATGTTTTTGATTTTCAGTCGCATACTCACTTTTTACATCGGGTAGATGGGCATCGTCGTCCGATTTTATATAGCCGCAGC
TACCATAATATTCTGTTTGATTTTGAACGTTCGCGGCGGGCGCTCGCACAGTTTACTCCGCACGTATTTTATCTTTCTTA
TCCCTTTGGCGGCTATAACGCGACCGCGATCAAAGCAGCAAAAGACGCCGGTTTCCATCTGGCGGTCACCACGGTGAGAG
GGAAGGTGAAGCCGGGAGATAATCCGATGCTGCTCAAAAGGCTGTATATTTTACGCACGGATTCGCTGGAAACCATGTCG
CGGCTGATCAGCAACCAGCCGCAGGGGTAA

Upstream 100 bases:

>100_bases
CCGCCTTTTGTATTGCTACATGATTTGTATGAGTTTTGATCAATACCATTGACGACGCTTTTGCTACAATAACGGCGTTT
TTTCGCCTCGGTTATGATAT

Downstream 100 bases:

>100_bases
GGACTATCAGGCAACCTGGACCGGAATGGCTTTCGCGGTACGCTTCATTTCGTTGTCGCCTTCAAAGTAGGCCACTTTCG
GCCGCCATGTCCGGGCTTCT

Product: polysaccharide deacetylase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MVMRVVLILLFFFSGNVLAALPARYMQTTKDAAIWSQIGDKMVTVGNIRAGQILSVTPVAADYYAFKFGFGEGFIDKDHL
EPVQGKQKVEDGLGDLNKPLSNQNLVTWKDTPVYNAPDISSAPFGVLVDNLRYPIISKLKGRLHQTWYQIRIGDRLAYVS
AMDAQEDNGIPILTYHHILRDEENTRFRHTSTTTSVRAFSNQMTWLRDRGYATLTMYQLEDYIHNRANFPARAVAITFDD
GLKSVSRYAYPVLKQYDMKATAFIISSRIKRHPQKWNPRSLQFMSVSELRKISDVFDFQSHTHFLHRVDGHRRPILYSRS
YHNILFDFERSRRALAQFTPHVFYLSYPFGGYNATAIKAAKDAGFHLAVTTVRGKVKPGDNPMLLKRLYILRTDSLETMS
RLISNQPQG

Sequences:

>Translated_409_residues
MVMRVVLILLFFFSGNVLAALPARYMQTTKDAAIWSQIGDKMVTVGNIRAGQILSVTPVAADYYAFKFGFGEGFIDKDHL
EPVQGKQKVEDGLGDLNKPLSNQNLVTWKDTPVYNAPDISSAPFGVLVDNLRYPIISKLKGRLHQTWYQIRIGDRLAYVS
AMDAQEDNGIPILTYHHILRDEENTRFRHTSTTTSVRAFSNQMTWLRDRGYATLTMYQLEDYIHNRANFPARAVAITFDD
GLKSVSRYAYPVLKQYDMKATAFIISSRIKRHPQKWNPRSLQFMSVSELRKISDVFDFQSHTHFLHRVDGHRRPILYSRS
YHNILFDFERSRRALAQFTPHVFYLSYPFGGYNATAIKAAKDAGFHLAVTTVRGKVKPGDNPMLLKRLYILRTDSLETMS
RLISNQPQG
>Mature_409_residues
MVMRVVLILLFFFSGNVLAALPARYMQTTKDAAIWSQIGDKMVTVGNIRAGQILSVTPVAADYYAFKFGFGEGFIDKDHL
EPVQGKQKVEDGLGDLNKPLSNQNLVTWKDTPVYNAPDISSAPFGVLVDNLRYPIISKLKGRLHQTWYQIRIGDRLAYVS
AMDAQEDNGIPILTYHHILRDEENTRFRHTSTTTSVRAFSNQMTWLRDRGYATLTMYQLEDYIHNRANFPARAVAITFDD
GLKSVSRYAYPVLKQYDMKATAFIISSRIKRHPQKWNPRSLQFMSVSELRKISDVFDFQSHTHFLHRVDGHRRPILYSRS
YHNILFDFERSRRALAQFTPHVFYLSYPFGGYNATAIKAAKDAGFHLAVTTVRGKVKPGDNPMLLKRLYILRTDSLETMS
RLISNQPQG

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786322, Length=409, Percent_Identity=82.1515892420538, Blast_Score=719, Evalue=0.0,
Organism=Escherichia coli, GI1787260, Length=237, Percent_Identity=23.6286919831224, Blast_Score=65, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 46857; Mature: 46857

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVMRVVLILLFFFSGNVLAALPARYMQTTKDAAIWSQIGDKMVTVGNIRAGQILSVTPVA
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEECCCC
ADYYAFKFGFGEGFIDKDHLEPVQGKQKVEDGLGDLNKPLSNQNLVTWKDTPVYNAPDIS
CCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCC
SAPFGVLVDNLRYPIISKLKGRLHQTWYQIRIGDRLAYVSAMDAQEDNGIPILTYHHILR
CCCHHHHHHCCCCHHHHHHHHHHHHEEEEEEECCEEEEEEECCCCCCCCCEEEEEHHHHC
DEENTRFRHTSTTTSVRAFSNQMTWLRDRGYATLTMYQLEDYIHNRANFPARAVAITFDD
CCCCCCEEECCCCHHHHHHHHCHHHHHCCCCEEEEHHHHHHHHHHCCCCCEEEEEEEECH
GLKSVSRYAYPVLKQYDMKATAFIISSRIKRHPQKWNPRSLQFMSVSELRKISDVFDFQS
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHH
HTHFLHRVDGHRRPILYSRSYHNILFDFERSRRALAQFTPHVFYLSYPFGGYNATAIKAA
HHHHHHHCCCCCCCEEEECCCCCCEEEEHHHHHHHHHCCCEEEEEEECCCCCCCEEEEEC
KDAGFHLAVTTVRGKVKPGDNPMLLKRLYILRTDSLETMSRLISNQPQG
CCCCEEEEEEEEECEECCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCC
>Mature Secondary Structure
MVMRVVLILLFFFSGNVLAALPARYMQTTKDAAIWSQIGDKMVTVGNIRAGQILSVTPVA
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEECCCC
ADYYAFKFGFGEGFIDKDHLEPVQGKQKVEDGLGDLNKPLSNQNLVTWKDTPVYNAPDIS
CCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCC
SAPFGVLVDNLRYPIISKLKGRLHQTWYQIRIGDRLAYVSAMDAQEDNGIPILTYHHILR
CCCHHHHHHCCCCHHHHHHHHHHHHEEEEEEECCEEEEEEECCCCCCCCCEEEEEHHHHC
DEENTRFRHTSTTTSVRAFSNQMTWLRDRGYATLTMYQLEDYIHNRANFPARAVAITFDD
CCCCCCEEECCCCHHHHHHHHCHHHHHCCCCEEEEHHHHHHHHHHCCCCCEEEEEEEECH
GLKSVSRYAYPVLKQYDMKATAFIISSRIKRHPQKWNPRSLQFMSVSELRKISDVFDFQS
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHH
HTHFLHRVDGHRRPILYSRSYHNILFDFERSRRALAQFTPHVFYLSYPFGGYNATAIKAA
HHHHHHHCCCCCCCEEEECCCCCCEEEEHHHHHHHHHCCCEEEEEEECCCCCCCEEEEEC
KDAGFHLAVTTVRGKVKPGDNPMLLKRLYILRTDSLETMSRLISNQPQG
CCCCEEEEEEEEECEECCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8202364; 9278503 [H]