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The map label for this gene is intZ [H]

Identifier: 194734635

GI number: 194734635

Start: 2162182

End: 2163363

Strand: Reverse

Name: intZ [H]

Synonym: SeSA_A2292

Alternate gene names: 194734635

Gene position: 2163363-2162182 (Counterclockwise)

Preceding gene: 194735873

Following gene: 194735203

Centisome position: 45.94

GC content: 46.7

Gene sequence:

>1182_bases
ATGGCAATCAGTGACACTAAGCTTCGCTCTGTCTATGGTAAACCATATTCCGGCCCATCTGAAATTACTGATTCTGATGG
GTTGGGTATCCGTATTACTCCAAAGGGAATCATTAGCTTCCAGTTCCGTTTTCGCTGGGATGGGAAACAGCACCGCATGG
GACTTGGTCGCTATCCTGCTCTCACTCTGCGTGACGCCCGTAACATAGTCGCAGATTTAAGAGAGTCCGTCGATAAAGGC
ATTGATCCTCGTGAGCTTGCCGGAAACAACAAGTCAAAGAAAAAACCAACGGTAAAAGACTGCCTGGATTACTGGGAGGC
AAACTATGTTAACGTGGCTTTGAGGGAAAAGACTAAGGCACTTTACAGGTCGACGGTCATAAAGCACATGAGTGATGCGT
TCGCCGGTGTTCCGATTGAAGAAATTCCTGTTCGCCTGTGGGTTGAACGATTTACTGACGAAGAGCGATTAAACCCACGC
AGGGCTCGTCAGTTACTGGTACAACTTCGGGCAGCTATTGGCTGGTGTACACGCAGACAATTTATCAGCACGGCTGATTT
AATGCTGTTACAGCCAAAAGATGTGGGGACAAAACCAACCGTGGGTGAGGTGACACTCAGTTATAATCAGCTTGCTAAAA
TCTGGCTGGCGATAGAGCGTAGCAGAGGGTCAACGTCTAACCGATTGCTCCATCAACTACTGATGCTGTATGGCGCAAGG
AATAGCGAACTTCGCCTGGCTGTTAAGGAGGAATTCGATCGTGAGGAGGGGATATGGACCGTACCCGCCGAAAAAAGTAA
AACGAACAGAATTATCAGACGACCAATTTTTGACGCGGCCGATCAGTTGCTTAAAAAAGCAGAAATGACATACGGGAATA
TTCTTTTCCCTGGTCCGGATCTGAAAAAGTCCATGACTATTGCTGGTGCAAACAGATTTCTTGGAAGGATAGAATCATCC
CTGGGTATTGGCGAATTTTCCGCTCATGATTTTCGGCGTACACTGGCAACCAGACTTTCAGAAGAAGGTATAGCTCCGCA
TGTTATTGAGAAAATGTTGGGGCATGAGCTGGGCGGCGTACTTTCTGTTTATAACAAACATGACTGGATTGCTGAACAGA
AAGCCGCCTATGAGCTGTACGCTGAAAAAATATTCTGGCATATCAGGAAGATTTCTGGTTGA

Upstream 100 bases:

>100_bases
ATTTGTACATGTCTGGATATTGTGGTTTATGTTGGTACATGCGATATTGAGTACAAAATAAGTACATAAACCATAAAATC
ATTGAGTACAGAAAACTAAA

Downstream 100 bases:

>100_bases
TCCCCCCGTTTAAGATCCACTGTACCACCTCAGACTGAAGGTATTGTTTGGGGTGAGTTCGGATTGGTTTTGGAAAATTA
TATAGCTTGGTATATTTCGA

Product: phage integrase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 393; Mature: 392

Protein sequence:

>393_residues
MAISDTKLRSVYGKPYSGPSEITDSDGLGIRITPKGIISFQFRFRWDGKQHRMGLGRYPALTLRDARNIVADLRESVDKG
IDPRELAGNNKSKKKPTVKDCLDYWEANYVNVALREKTKALYRSTVIKHMSDAFAGVPIEEIPVRLWVERFTDEERLNPR
RARQLLVQLRAAIGWCTRRQFISTADLMLLQPKDVGTKPTVGEVTLSYNQLAKIWLAIERSRGSTSNRLLHQLLMLYGAR
NSELRLAVKEEFDREEGIWTVPAEKSKTNRIIRRPIFDAADQLLKKAEMTYGNILFPGPDLKKSMTIAGANRFLGRIESS
LGIGEFSAHDFRRTLATRLSEEGIAPHVIEKMLGHELGGVLSVYNKHDWIAEQKAAYELYAEKIFWHIRKISG

Sequences:

>Translated_393_residues
MAISDTKLRSVYGKPYSGPSEITDSDGLGIRITPKGIISFQFRFRWDGKQHRMGLGRYPALTLRDARNIVADLRESVDKG
IDPRELAGNNKSKKKPTVKDCLDYWEANYVNVALREKTKALYRSTVIKHMSDAFAGVPIEEIPVRLWVERFTDEERLNPR
RARQLLVQLRAAIGWCTRRQFISTADLMLLQPKDVGTKPTVGEVTLSYNQLAKIWLAIERSRGSTSNRLLHQLLMLYGAR
NSELRLAVKEEFDREEGIWTVPAEKSKTNRIIRRPIFDAADQLLKKAEMTYGNILFPGPDLKKSMTIAGANRFLGRIESS
LGIGEFSAHDFRRTLATRLSEEGIAPHVIEKMLGHELGGVLSVYNKHDWIAEQKAAYELYAEKIFWHIRKISG
>Mature_392_residues
AISDTKLRSVYGKPYSGPSEITDSDGLGIRITPKGIISFQFRFRWDGKQHRMGLGRYPALTLRDARNIVADLRESVDKGI
DPRELAGNNKSKKKPTVKDCLDYWEANYVNVALREKTKALYRSTVIKHMSDAFAGVPIEEIPVRLWVERFTDEERLNPRR
ARQLLVQLRAAIGWCTRRQFISTADLMLLQPKDVGTKPTVGEVTLSYNQLAKIWLAIERSRGSTSNRLLHQLLMLYGARN
SELRLAVKEEFDREEGIWTVPAEKSKTNRIIRRPIFDAADQLLKKAEMTYGNILFPGPDLKKSMTIAGANRFLGRIESSL
GIGEFSAHDFRRTLATRLSEEGIAPHVIEKMLGHELGGVLSVYNKHDWIAEQKAAYELYAEKIFWHIRKISG

Specific function: Integrase is necessary for integration of the phage into the host genome by site-specific recombination. In conjunction with excisionase, integrase is also necessary for excision of the prophage from the host genome [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

Organism=Escherichia coli, GI145693166, Length=382, Percent_Identity=25.9162303664921, Blast_Score=101, Evalue=9e-23,
Organism=Escherichia coli, GI1788974, Length=403, Percent_Identity=25.8064516129032, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1788690, Length=394, Percent_Identity=25.3807106598985, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 44784; Mature: 44653

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAISDTKLRSVYGKPYSGPSEITDSDGLGIRITPKGIISFQFRFRWDGKQHRMGLGRYPA
CCCCCHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEEEEECCHHHCCCCCCCCC
LTLRDARNIVADLRESVDKGIDPRELAGNNKSKKKPTVKDCLDYWEANYVNVALREKTKA
EEHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCHHHHHHHHCCCEEEEHHHHHHHH
LYRSTVIKHMSDAFAGVPIEEIPVRLWVERFTDEERLNPRRARQLLVQLRAAIGWCTRRQ
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHH
FISTADLMLLQPKDVGTKPTVGEVTLSYNQLAKIWLAIERSRGSTSNRLLHQLLMLYGAR
HHHHCCEEEECCCCCCCCCCCCEEEECHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC
NSELRLAVKEEFDREEGIWTVPAEKSKTNRIIRRPIFDAADQLLKKAEMTYGNILFPGPD
CCCEEEEEHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCC
LKKSMTIAGANRFLGRIESSLGIGEFSAHDFRRTLATRLSEEGIAPHVIEKMLGHELGGV
CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LSVYNKHDWIAEQKAAYELYAEKIFWHIRKISG
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AISDTKLRSVYGKPYSGPSEITDSDGLGIRITPKGIISFQFRFRWDGKQHRMGLGRYPA
CCCCHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEEEEECCHHHCCCCCCCCC
LTLRDARNIVADLRESVDKGIDPRELAGNNKSKKKPTVKDCLDYWEANYVNVALREKTKA
EEHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCHHHHHHHHCCCEEEEHHHHHHHH
LYRSTVIKHMSDAFAGVPIEEIPVRLWVERFTDEERLNPRRARQLLVQLRAAIGWCTRRQ
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHH
FISTADLMLLQPKDVGTKPTVGEVTLSYNQLAKIWLAIERSRGSTSNRLLHQLLMLYGAR
HHHHCCEEEECCCCCCCCCCCCEEEECHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC
NSELRLAVKEEFDREEGIWTVPAEKSKTNRIIRRPIFDAADQLLKKAEMTYGNILFPGPD
CCCEEEEEHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCC
LKKSMTIAGANRFLGRIESSLGIGEFSAHDFRRTLATRLSEEGIAPHVIEKMLGHELGGV
CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LSVYNKHDWIAEQKAAYELYAEKIFWHIRKISG
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]