| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
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The map label for this gene is yhjX [H]
Identifier: 194734416
GI number: 194734416
Start: 2720520
End: 2721716
Strand: Reverse
Name: yhjX [H]
Synonym: SeSA_A2817
Alternate gene names: 194734416
Gene position: 2721716-2720520 (Counterclockwise)
Preceding gene: 194736562
Following gene: 194734473
Centisome position: 57.8
GC content: 46.62
Gene sequence:
>1197_bases ATGTCGGCATCAATCAACCGCTGGGGAATGCTTGCCGCTCACGTGTGCATCAATTTTGTGCTCGGGGGCGTCTACGCATT TAGCTATTTCAAAACACCACTCATGGCGCAATATCACTGGGATCCGGCTACGCTGGCGTTAGCATTCTCTATCAACATGG GGATCATTCCTTTACCGATGATTTGGGGCGGGAGAATGATCGACAATGGTAAAGGAAAGCAGGCGATAGTTATCGGCGGT ATCCTGTTTTCTTTAGGTTTTATCTTGTCCGGGTTTGTGGATAATTTGCCCATGCTGTTTTTAACCTACGGCGTCATTGC CGGGTTGGGATCGGGCCTGGCTTTTACGGGTAATCTGAATAATATTCTGAAATTTTTCCCTGACCGTCGCGGTCTTGCCA GCGGTATCGTACTGGCGGGTGTTGGCGTCGGGACGCTACTTTGCACCCGCCTGGCCGAATATTTTATGGCGCAAACTCAC GATGTTAGTCGGGCGTTGTTATATCTGGGCATTGTTTATCTGGTGGTTATTTTTATCGTCCAGTTCTTTATTCGTAGCGC GCCAGCAAAAGATAGCGGAGGAATTAAAGCATCGCCAATGGATAAAGACTATCGGCACATGCTGAAAGATCTGCGCTTCT GGCTGCTGTTTATGATTCTGGCGCTGGGCGTGTTCTCTGGGATGGTAATTAGCTCAAGCTCTGCGCAAATTGGTATGACG CAGTACGGTTTACTGTCCGGTGCATTAGTCGTTAGCCTGGTATCGATATTTAACTCAATTGGTCGCCTGTTCTGGGGAGG GTTAACCGATAAATTAGGCGGCTACAATACTCTGGTTATCGTTTATCTTTTTACCTGCGTCTGTATGCTGCTATTGTTGT TCTTCAACGGCAATACTTCGGTATTCTATTTCAGCGCTCTGGGCGTGGGCTTTGCTTATGCCGGTATATTAGTTATCTTC CCTGGCTTGACCAGCCAGAATTTTGGTATGCGTAACCAGGGACTAAACTACGGCTTTATGTATTTTGGTTTTGCCGTCGG TGCGGTTATTGCTCCTTACGTCACGTCCGCTATTGCAAAATATACCGGAAGCTACAATACGGTATTTATTTTGACCACGG TGCTATTGCTTATTGGAGTCGTGTTGACCCTGATAACGAAAAAATATGTCGCAACGGTTTTAGCCAAAATTTATTAA
Upstream 100 bases:
>100_bases ATCGATTGGGTTTTGTTATAACGATTATAAAAAATACCAAATTGTTTGCCTATTTTGCTTTTTTTAAACTGTGATCAGTG CATTTTAAAAAGGGAAAATT
Downstream 100 bases:
>100_bases TCAGATAATAAGGAAATAAAAATGAAAATTGCAATCGCAGGTGCAGGCGCTATGGGATGTCGTTTTGGCTATATGCTGCT GGAGGCCGGGCACGACGTGA
Product: major facilitator family transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MSASINRWGMLAAHVCINFVLGGVYAFSYFKTPLMAQYHWDPATLALAFSINMGIIPLPMIWGGRMIDNGKGKQAIVIGG ILFSLGFILSGFVDNLPMLFLTYGVIAGLGSGLAFTGNLNNILKFFPDRRGLASGIVLAGVGVGTLLCTRLAEYFMAQTH DVSRALLYLGIVYLVVIFIVQFFIRSAPAKDSGGIKASPMDKDYRHMLKDLRFWLLFMILALGVFSGMVISSSSAQIGMT QYGLLSGALVVSLVSIFNSIGRLFWGGLTDKLGGYNTLVIVYLFTCVCMLLLLFFNGNTSVFYFSALGVGFAYAGILVIF PGLTSQNFGMRNQGLNYGFMYFGFAVGAVIAPYVTSAIAKYTGSYNTVFILTTVLLLIGVVLTLITKKYVATVLAKIY
Sequences:
>Translated_398_residues MSASINRWGMLAAHVCINFVLGGVYAFSYFKTPLMAQYHWDPATLALAFSINMGIIPLPMIWGGRMIDNGKGKQAIVIGG ILFSLGFILSGFVDNLPMLFLTYGVIAGLGSGLAFTGNLNNILKFFPDRRGLASGIVLAGVGVGTLLCTRLAEYFMAQTH DVSRALLYLGIVYLVVIFIVQFFIRSAPAKDSGGIKASPMDKDYRHMLKDLRFWLLFMILALGVFSGMVISSSSAQIGMT QYGLLSGALVVSLVSIFNSIGRLFWGGLTDKLGGYNTLVIVYLFTCVCMLLLLFFNGNTSVFYFSALGVGFAYAGILVIF PGLTSQNFGMRNQGLNYGFMYFGFAVGAVIAPYVTSAIAKYTGSYNTVFILTTVLLLIGVVLTLITKKYVATVLAKIY >Mature_397_residues SASINRWGMLAAHVCINFVLGGVYAFSYFKTPLMAQYHWDPATLALAFSINMGIIPLPMIWGGRMIDNGKGKQAIVIGGI LFSLGFILSGFVDNLPMLFLTYGVIAGLGSGLAFTGNLNNILKFFPDRRGLASGIVLAGVGVGTLLCTRLAEYFMAQTHD VSRALLYLGIVYLVVIFIVQFFIRSAPAKDSGGIKASPMDKDYRHMLKDLRFWLLFMILALGVFSGMVISSSSAQIGMTQ YGLLSGALVVSLVSIFNSIGRLFWGGLTDKLGGYNTLVIVYLFTCVCMLLLLFFNGNTSVFYFSALGVGFAYAGILVIFP GLTSQNFGMRNQGLNYGFMYFGFAVGAVIAPYVTSAIAKYTGSYNTVFILTTVLLLIGVVLTLITKKYVATVLAKIY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI41327156, Length=186, Percent_Identity=31.1827956989247, Blast_Score=84, Evalue=3e-16, Organism=Homo sapiens, GI291621700, Length=381, Percent_Identity=25.9842519685039, Blast_Score=80, Evalue=3e-15, Organism=Escherichia coli, GI1789969, Length=357, Percent_Identity=28.2913165266106, Blast_Score=145, Evalue=4e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR004741 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 43141; Mature: 43010
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASINRWGMLAAHVCINFVLGGVYAFSYFKTPLMAQYHWDPATLALAFSINMGIIPLPM CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCHHHEEEEEEECCCCEECCH IWGGRMIDNGKGKQAIVIGGILFSLGFILSGFVDNLPMLFLTYGVIAGLGSGLAFTGNLN HCCCEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHH NILKFFPDRRGLASGIVLAGVGVGTLLCTRLAEYFMAQTHDVSRALLYLGIVYLVVIFIV HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QFFIRSAPAKDSGGIKASPMDKDYRHMLKDLRFWLLFMILALGVFSGMVISSSSAQIGMT HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHEECCCCCCCHH QYGLLSGALVVSLVSIFNSIGRLFWGGLTDKLGGYNTLVIVYLFTCVCMLLLLFFNGNTS HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC VFYFSALGVGFAYAGILVIFPGLTSQNFGMRNQGLNYGFMYFGFAVGAVIAPYVTSAIAK EEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH YTGSYNTVFILTTVLLLIGVVLTLITKKYVATVLAKIY HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SASINRWGMLAAHVCINFVLGGVYAFSYFKTPLMAQYHWDPATLALAFSINMGIIPLPM CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCHHHEEEEEEECCCCEECCH IWGGRMIDNGKGKQAIVIGGILFSLGFILSGFVDNLPMLFLTYGVIAGLGSGLAFTGNLN HCCCEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHH NILKFFPDRRGLASGIVLAGVGVGTLLCTRLAEYFMAQTHDVSRALLYLGIVYLVVIFIV HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QFFIRSAPAKDSGGIKASPMDKDYRHMLKDLRFWLLFMILALGVFSGMVISSSSAQIGMT HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHEECCCCCCCHH QYGLLSGALVVSLVSIFNSIGRLFWGGLTDKLGGYNTLVIVYLFTCVCMLLLLFFNGNTS HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC VFYFSALGVGFAYAGILVIFPGLTSQNFGMRNQGLNYGFMYFGFAVGAVIAPYVTSAIAK EEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH YTGSYNTVFILTTVLLLIGVVLTLITKKYVATVLAKIY HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]