Click here to switch to the map view.

The map label for this gene is yfeN [H]

Identifier: 194734373

GI number: 194734373

Start: 2538783

End: 2539544

Strand: Direct

Name: yfeN [H]

Synonym: SeSA_A2658

Alternate gene names: 194734373

Gene position: 2538783-2539544 (Clockwise)

Preceding gene: 194735830

Following gene: 194736459

Centisome position: 53.91

GC content: 45.28

Gene sequence:

>762_bases
ATGAAAAAAATTCTTACTCTGACGCTTTCTTCTTTGCTCATTATTCCCACACTCACCCATGCGGAATTTAAAGGCGGGTT
CGCCGATATCGGCCTCCATTACCTCGACTGGACATCAGACACCACGGAAAAAACCAGTAAAAAATCTCATAAAGATGATT
TTGGGTACCTGGAACTGGAAGGCGGAGCGAATTTTAGCTGGGGAGAAATGTACGTTTTTTTCGACTGGGAAAATTTTTAC
AATGGCCGCCACGCTAAACCCGGCAGCGAACAGCGTTACACCTTTAAAAATACTAACCGTATTTATCTGGGCGATACAGG
ATTAAACCTCTATCTCCATGCCTACGGGACGTACGGTTCACCTCATCGCGCTAATTTCCATGATGACATGTTTCTCTATG
GTTTAGGCTATAACTTCGCAGGTAACGGTTACTGGTTTAAACCCTTCTTTGCCAAACGTTATACCGATCAGACCTACTAC
ACAGGCGATAATGGTTATGTATTAGGTTGGGTGGCCGGCTATAGCTTCTCGTTGGGTAGTGAGAAATTCAGCGTAACGAA
CTGGAATGAGTATGAGTTTGACCGCGATGCGTCCTACGCTGCGGGCAATGGCGGGAAAGATGGCATTAATGGCGCAGTAG
CGCTGTGGTGGAATGCGACTCCTCACCTGACCGCAGGAGTACAATATCGTTACGCTGATAATAAGTTAGGAGAATCCTTC
CTGCAGGATGGCATTATTTATTCCATCAAATACCTGTTTTAA

Upstream 100 bases:

>100_bases
TTTTGCTTGCACTTCATATTAACAATATGCCGCTTTCATATTTATAAACTGCCTCTTTTTAATTAACCCATTAATAATTA
TCGGCATAGGGAAATATGCT

Downstream 100 bases:

>100_bases
TGCACTGCCCTGTCAAAAATGGCAGGGCAAGACCGCACCTCACGCACGGACAGATAGATATTTATAGCTGATACAGTGGA
TCTTTCGCCCTCGCGGCGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MKKILTLTLSSLLIIPTLTHAEFKGGFADIGLHYLDWTSDTTEKTSKKSHKDDFGYLELEGGANFSWGEMYVFFDWENFY
NGRHAKPGSEQRYTFKNTNRIYLGDTGLNLYLHAYGTYGSPHRANFHDDMFLYGLGYNFAGNGYWFKPFFAKRYTDQTYY
TGDNGYVLGWVAGYSFSLGSEKFSVTNWNEYEFDRDASYAAGNGGKDGINGAVALWWNATPHLTAGVQYRYADNKLGESF
LQDGIIYSIKYLF

Sequences:

>Translated_253_residues
MKKILTLTLSSLLIIPTLTHAEFKGGFADIGLHYLDWTSDTTEKTSKKSHKDDFGYLELEGGANFSWGEMYVFFDWENFY
NGRHAKPGSEQRYTFKNTNRIYLGDTGLNLYLHAYGTYGSPHRANFHDDMFLYGLGYNFAGNGYWFKPFFAKRYTDQTYY
TGDNGYVLGWVAGYSFSLGSEKFSVTNWNEYEFDRDASYAAGNGGKDGINGAVALWWNATPHLTAGVQYRYADNKLGESF
LQDGIIYSIKYLF
>Mature_253_residues
MKKILTLTLSSLLIIPTLTHAEFKGGFADIGLHYLDWTSDTTEKTSKKSHKDDFGYLELEGGANFSWGEMYVFFDWENFY
NGRHAKPGSEQRYTFKNTNRIYLGDTGLNLYLHAYGTYGSPHRANFHDDMFLYGLGYNFAGNGYWFKPFFAKRYTDQTYY
TGDNGYVLGWVAGYSFSLGSEKFSVTNWNEYEFDRDASYAAGNGGKDGINGAVALWWNATPHLTAGVQYRYADNKLGESF
LQDGIIYSIKYLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To V.parahaemolyticus ompK [H]

Homologues:

Organism=Escherichia coli, GI1788747, Length=239, Percent_Identity=84.9372384937239, Blast_Score=427, Evalue=1e-121,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018013 [H]

Pfam domain/function: PF03502 Channel_Tsx [H]

EC number: NA

Molecular weight: Translated: 28911; Mature: 28911

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: PS00019 ACTININ_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILTLTLSSLLIIPTLTHAEFKGGFADIGLHYLDWTSDTTEKTSKKSHKDDFGYLELE
CCEEEEEEHHHEEEEEEECCHHHCCCCHHCCEEEEECCCCCCHHHHCCCCCCCCCEEEEC
GGANFSWGEMYVFFDWENFYNGRHAKPGSEQRYTFKNTNRIYLGDTGLNLYLHAYGTYGS
CCCCCCCCEEEEEEECHHHCCCCCCCCCCCCEEEEECCCEEEEECCCCEEEEEEEECCCC
PHRANFHDDMFLYGLGYNFAGNGYWFKPFFAKRYTDQTYYTGDNGYVLGWVAGYSFSLGS
CCCCCCCCCEEEEEECCCCCCCCEEECCHHHHHCCCCEEEECCCCEEEEEEECEEEECCC
EKFSVTNWNEYEFDRDASYAAGNGGKDGINGAVALWWNATPHLTAGVQYRYADNKLGESF
CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEECEEEEECCCHHHHHH
LQDGIIYSIKYLF
HHCCEEEEEEEEC
>Mature Secondary Structure
MKKILTLTLSSLLIIPTLTHAEFKGGFADIGLHYLDWTSDTTEKTSKKSHKDDFGYLELE
CCEEEEEEHHHEEEEEEECCHHHCCCCHHCCEEEEECCCCCCHHHHCCCCCCCCCEEEEC
GGANFSWGEMYVFFDWENFYNGRHAKPGSEQRYTFKNTNRIYLGDTGLNLYLHAYGTYGS
CCCCCCCCEEEEEEECHHHCCCCCCCCCCCCEEEEECCCEEEEECCCCEEEEEEEECCCC
PHRANFHDDMFLYGLGYNFAGNGYWFKPFFAKRYTDQTYYTGDNGYVLGWVAGYSFSLGS
CCCCCCCCCEEEEEECCCCCCCCEEECCHHHHHCCCCEEEECCCCEEEEEEECEEEECCC
EKFSVTNWNEYEFDRDASYAAGNGGKDGINGAVALWWNATPHLTAGVQYRYADNKLGESF
CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEECEEEEECCCHHHHHH
LQDGIIYSIKYLF
HHCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7559336; 9205837; 9278503 [H]