| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
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The map label for this gene is yghU [H]
Identifier: 194734333
GI number: 194734333
Start: 3209872
End: 3210738
Strand: Direct
Name: yghU [H]
Synonym: SeSA_A3322
Alternate gene names: 194734333
Gene position: 3209872-3210738 (Clockwise)
Preceding gene: 194734239
Following gene: 194736532
Centisome position: 68.16
GC content: 54.56
Gene sequence:
>867_bases ATGGCAGATAATACTTATCAACCCGCAAAAGTCTGGACGTGGGATAAATCCGGCGGCGGCGCGTTCGCTAACATTAATCG CCCGGTTTCCGGCCCGACGCACGACAAAACGCTGCCCGTCGGCAAACATCCGTTACAGCTTTATTCGCTGGGGACGCCTA ACGGCCAGAAAGTGACCATTATGCTGGAAGAGCTCCTGGCGCTGGGCGTGACCGGCGCCGAATATGACGCCTGGTTGATT CGCATCGGCGAGGGCGATCAGTTCTCCAGCGGCTTTGTTGACATCAATCCGAACTCAAAAATCCCGGCGCTGCGCGATAA CTCACACAACCCGCCGATTCGAGTTTTTGAGTCGGGCGCAATTCTTGTTTATCTGGCGGATAAGTTTGGCCATTTCCTGC CGCAGGATCTGGCTAAGCGCACAGAAACCCTTAACTGGTTGTTCTGGCTACAGGGCGCGGCGCCGTTCCTCGGTGGCGGT TTCGGTCATTTCTATCATTATGCGCCGGTAAAAATTGAGTACGCCATTAATCGCTTCACCATGGAAGCCAAGCGTCTGCT GGACGTGCTGGATAAGCAGTTAGCTCATCACCCGTATGTCGCGGGAGAAGAGTACACTATTGCCGATATGGCCATCTGGC CGTGGTTCGGCAACGTGGTGCTGGGGAATGTCTATGATGCAGCGGAGTTTCTGGATGCCGGAAGTTATCAAAACGTACAA CGCTGGGCGAAACAGGTAGCCGAACGTCCGGCGGTAAAGCGGGGGCGCATTGTCAACCGGACCAACGGCCCATTGAACGA ACAGCTTCACGAACGCCATGACGCCAGCGACTTCGAAAACCATACCGAAGATAAACGTCAAAGTTAA
Upstream 100 bases:
>100_bases AAGGTTAAAATTTCACTCGCCGGAATGTCCCAATCGGTTAAATGTCCGGTTAGCAAGCTGCTACACTGCTTCAACACCAC CACTGTGAAGGCAGGTCAAT
Downstream 100 bases:
>100_bases ACCATAATGCCGGATGGGGTAATAATGTCGTCATCCGGCATGGTATTCCCTGCTGACGCTTCGCTTATCAGTTCTGCGAG CGTGTCATATGCGGCGCTTC
Product: putative glutathione S-transferase YghU
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 288; Mature: 287
Protein sequence:
>288_residues MADNTYQPAKVWTWDKSGGGAFANINRPVSGPTHDKTLPVGKHPLQLYSLGTPNGQKVTIMLEELLALGVTGAEYDAWLI RIGEGDQFSSGFVDINPNSKIPALRDNSHNPPIRVFESGAILVYLADKFGHFLPQDLAKRTETLNWLFWLQGAAPFLGGG FGHFYHYAPVKIEYAINRFTMEAKRLLDVLDKQLAHHPYVAGEEYTIADMAIWPWFGNVVLGNVYDAAEFLDAGSYQNVQ RWAKQVAERPAVKRGRIVNRTNGPLNEQLHERHDASDFENHTEDKRQS
Sequences:
>Translated_288_residues MADNTYQPAKVWTWDKSGGGAFANINRPVSGPTHDKTLPVGKHPLQLYSLGTPNGQKVTIMLEELLALGVTGAEYDAWLI RIGEGDQFSSGFVDINPNSKIPALRDNSHNPPIRVFESGAILVYLADKFGHFLPQDLAKRTETLNWLFWLQGAAPFLGGG FGHFYHYAPVKIEYAINRFTMEAKRLLDVLDKQLAHHPYVAGEEYTIADMAIWPWFGNVVLGNVYDAAEFLDAGSYQNVQ RWAKQVAERPAVKRGRIVNRTNGPLNEQLHERHDASDFENHTEDKRQS >Mature_287_residues ADNTYQPAKVWTWDKSGGGAFANINRPVSGPTHDKTLPVGKHPLQLYSLGTPNGQKVTIMLEELLALGVTGAEYDAWLIR IGEGDQFSSGFVDINPNSKIPALRDNSHNPPIRVFESGAILVYLADKFGHFLPQDLAKRTETLNWLFWLQGAAPFLGGGF GHFYHYAPVKIEYAINRFTMEAKRLLDVLDKQLAHHPYVAGEEYTIADMAIWPWFGNVVLGNVYDAAEFLDAGSYQNVQR WAKQVAERPAVKRGRIVNRTNGPLNEQLHERHDASDFENHTEDKRQS
Specific function: Unknown
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI87082195, Length=287, Percent_Identity=91.6376306620209, Blast_Score=556, Evalue=1e-160, Organism=Escherichia coli, GI1788640, Length=214, Percent_Identity=42.9906542056075, Blast_Score=155, Evalue=2e-39, Organism=Escherichia coli, GI87081789, Length=174, Percent_Identity=30.4597701149425, Blast_Score=69, Evalue=4e-13, Organism=Saccharomyces cerevisiae, GI6324100, Length=257, Percent_Identity=29.1828793774319, Blast_Score=94, Evalue=3e-20, Organism=Drosophila melanogaster, GI28571670, Length=182, Percent_Identity=30.7692307692308, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI17864592, Length=209, Percent_Identity=29.6650717703349, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI17864594, Length=203, Percent_Identity=30.0492610837438, Blast_Score=66, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]
EC number: NA
Molecular weight: Translated: 32344; Mature: 32213
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADNTYQPAKVWTWDKSGGGAFANINRPVSGPTHDKTLPVGKHPLQLYSLGTPNGQKVTI CCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEE MLEELLALGVTGAEYDAWLIRIGEGDQFSSGFVDINPNSKIPALRDNSHNPPIRVFESGA EHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEECCE ILVYLADKFGHFLPQDLAKRTETLNWLFWLQGAAPFLGGGFGHFYHYAPVKIEYAINRFT EEEEEECHHCCCCHHHHHHHHHHHEEEEEECCCCCHHCCCHHHHEEECCEEEEEEHHHHH MEAKRLLDVLDKQLAHHPYVAGEEYTIADMAIWPWFGNVVLGNVYDAAEFLDAGSYQNVQ HHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCEEECCHHHHHHHHCCCCHHHHH RWAKQVAERPAVKRGRIVNRTNGPLNEQLHERHDASDFENHTEDKRQS HHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHCCCHHHHHHCHHHCCC >Mature Secondary Structure ADNTYQPAKVWTWDKSGGGAFANINRPVSGPTHDKTLPVGKHPLQLYSLGTPNGQKVTI CCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEE MLEELLALGVTGAEYDAWLIRIGEGDQFSSGFVDINPNSKIPALRDNSHNPPIRVFESGA EHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEECCE ILVYLADKFGHFLPQDLAKRTETLNWLFWLQGAAPFLGGGFGHFYHYAPVKIEYAINRFT EEEEEECHHCCCCHHHHHHHHHHHEEEEEECCCCCHHCCCHHHHEEECCEEEEEEHHHHH MEAKRLLDVLDKQLAHHPYVAGEEYTIADMAIWPWFGNVVLGNVYDAAEFLDAGSYQNVQ HHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCEEECCHHHHHHHHCCCCHHHHH RWAKQVAERPAVKRGRIVNRTNGPLNEQLHERHDASDFENHTEDKRQS HHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHCCCHHHHHHCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]