| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
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The map label for this gene is cobZ [H]
Identifier: 194734267
GI number: 194734267
Start: 819618
End: 821021
Strand: Reverse
Name: cobZ [H]
Synonym: SeSA_A0847
Alternate gene names: 194734267
Gene position: 821021-819618 (Counterclockwise)
Preceding gene: 194737445
Following gene: 194736521
Centisome position: 17.43
GC content: 58.12
Gene sequence:
>1404_bases ATGGTTGATGTACTGGTGATAGGCGGAGGCAATGCCGCATTATGCGCCGCCCTGACCGCACGGGAAGCGGGCGCATCGGT TCTGCTGCTGGAGGCTGCCCCGCGGGAATGGCGCGGCGGAAATTCTCAGCACACACGAAACCTGCGCTGTATGCATGATG CGCCGCAGGATGTGCTGGTAGAAAGCTATCCTGAAGAGGAATTCTGGCAGGATCTGTGGCGAGTCACCGACGGCAACACC AACGAGGCGCTGGCGCGGCTGGTCATTCGCACCTCTTCGCAATGCCGCGACTGGATGCGCAAACATGGCGTTAACTTTCA ACCGCCACTGTCTGGGGCGCTCCACGTTGCGCGCACCAATGCGTTTTTTATGGGCGGCGGGAAAGCGCTCGTCAATGCCT ATTACCGTAGCGCCGAACGGCTGGGCGTACAGATTCGCTATAACACGCCGGTTCACGCGCTTGAACTTCATGACGGCGAA TTCGTAGCAGCGCTGGCGGGTAGCGAACGTATTACCGCCAAAGCCTGCGTATTAGCGGCTGGCGGTTTCGAATCAAACCG TGAATGGCTGCGGGAAGCCTGGGGAGAAAACGCCCGCGGCGAATGGCCCGCGGATAATTTCCTGATTCGCGGCACGCGTT TTAACCAGGGCGTATTACTCAAATTTATGATGGATGCCGGCGCGGATATCATTGGCGATCCGTCCCAGTCGCACTGCGTA GCGATTGATGCCAGGGCGCCGCTGTACGACGGCGGTATTTGTACTCGCGTGGATTGCGTATCGCTGGGTATTGTCGTGAA TCGCGACGCCGAACGTTTTTATGATGAAGGCGAAGATTTCTGGCCGAAGCGTTACGCCATTTGGGGGCGGCTGGTGGCTC AACAGCCAGGACAAATTGGCTATTCGATTATTGACAGCAAAGCCATCGGCCACTTTATGCCGCCGGTTTTTCCTGGCGCG CAGGCCAATACGCTGGCTGAGCTGGCCTGCCAGTTGGGGCTGGACGCGGAAAAATTTACCCATACCGTCACGCAGTATAA CCAGGCCTGCCAGCCCGGTCATTTTGATCATACCTTGCTTGATGACTGCGCTACTAAAAACCTGACGCCGGCGAAAACCC ACTGGGCGCGCCCGCTTGATGCGCCGCCCTACTACGGTTATGCGCTGCGACCCGGCATCACGTTTACCTACCTGGGTCTG AAAGTCAATGAACGTGCCGCGGTGCATTTTGCCGGTCATCCAAGCCGCAACCTGTTTGTTGCCGGCGAGATGATGGCAGG AAATGTTCTGGGCAAGGGGTATACCGCAGGCGTAGGCATGTCTATCGGCACAACCTTTGGCCGCATTGCGGGAATAGAAG CCGCCCGCGCGGCGCACAAGGAGGCGCAGCATGAAACAGCTTGA
Upstream 100 bases:
>100_bases TAAACCCCTGTTTAGCGCTACCTGATAGCGCGCCGCTTATTTATCCGTATACATTTCAATTACAAATTTAACAAATAGTT AAATGGTACGGGAGTATAAG
Downstream 100 bases:
>100_bases AAAATTAATCATTGAGGCCACCGTGCTTACCGAACCGGAAGTCGAGGTCGAACGCGTCATGCAAGTGTGTAACGCGTGTC GCTACTGCGAAGGTTTTTGC
Product: tricarballylate dehydrogenase
Products: NA
Alternate protein names: Fe(3+)-induced flavocytochrome C3; Ifc3; Iron(III)-induced flavocytochrome C3 [H]
Number of amino acids: Translated: 467; Mature: 467
Protein sequence:
>467_residues MVDVLVIGGGNAALCAALTAREAGASVLLLEAAPREWRGGNSQHTRNLRCMHDAPQDVLVESYPEEEFWQDLWRVTDGNT NEALARLVIRTSSQCRDWMRKHGVNFQPPLSGALHVARTNAFFMGGGKALVNAYYRSAERLGVQIRYNTPVHALELHDGE FVAALAGSERITAKACVLAAGGFESNREWLREAWGENARGEWPADNFLIRGTRFNQGVLLKFMMDAGADIIGDPSQSHCV AIDARAPLYDGGICTRVDCVSLGIVVNRDAERFYDEGEDFWPKRYAIWGRLVAQQPGQIGYSIIDSKAIGHFMPPVFPGA QANTLAELACQLGLDAEKFTHTVTQYNQACQPGHFDHTLLDDCATKNLTPAKTHWARPLDAPPYYGYALRPGITFTYLGL KVNERAAVHFAGHPSRNLFVAGEMMAGNVLGKGYTAGVGMSIGTTFGRIAGIEAARAAHKEAQHETA
Sequences:
>Translated_467_residues MVDVLVIGGGNAALCAALTAREAGASVLLLEAAPREWRGGNSQHTRNLRCMHDAPQDVLVESYPEEEFWQDLWRVTDGNT NEALARLVIRTSSQCRDWMRKHGVNFQPPLSGALHVARTNAFFMGGGKALVNAYYRSAERLGVQIRYNTPVHALELHDGE FVAALAGSERITAKACVLAAGGFESNREWLREAWGENARGEWPADNFLIRGTRFNQGVLLKFMMDAGADIIGDPSQSHCV AIDARAPLYDGGICTRVDCVSLGIVVNRDAERFYDEGEDFWPKRYAIWGRLVAQQPGQIGYSIIDSKAIGHFMPPVFPGA QANTLAELACQLGLDAEKFTHTVTQYNQACQPGHFDHTLLDDCATKNLTPAKTHWARPLDAPPYYGYALRPGITFTYLGL KVNERAAVHFAGHPSRNLFVAGEMMAGNVLGKGYTAGVGMSIGTTFGRIAGIEAARAAHKEAQHETA >Mature_467_residues MVDVLVIGGGNAALCAALTAREAGASVLLLEAAPREWRGGNSQHTRNLRCMHDAPQDVLVESYPEEEFWQDLWRVTDGNT NEALARLVIRTSSQCRDWMRKHGVNFQPPLSGALHVARTNAFFMGGGKALVNAYYRSAERLGVQIRYNTPVHALELHDGE FVAALAGSERITAKACVLAAGGFESNREWLREAWGENARGEWPADNFLIRGTRFNQGVLLKFMMDAGADIIGDPSQSHCV AIDARAPLYDGGICTRVDCVSLGIVVNRDAERFYDEGEDFWPKRYAIWGRLVAQQPGQIGYSIIDSKAIGHFMPPVFPGA QANTLAELACQLGLDAEKFTHTVTQYNQACQPGHFDHTLLDDCATKNLTPAKTHWARPLDAPPYYGYALRPGITFTYLGL KVNERAAVHFAGHPSRNLFVAGEMMAGNVLGKGYTAGVGMSIGTTFGRIAGIEAARAAHKEAQHETA
Specific function: Catalyzes unidirectional fumarate reduction using artificial electron donors such as methyl viologen. The physiological reductant is unknown [H]
COG id: COG1053
COG function: function code C; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cytochrome c domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003953 - InterPro: IPR013027 - InterPro: IPR010960 - InterPro: IPR011031 [H]
Pfam domain/function: PF00890 FAD_binding_2 [H]
EC number: =1.3.99.1 [H]
Molecular weight: Translated: 51014; Mature: 51014
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDVLVIGGGNAALCAALTAREAGASVLLLEAAPREWRGGNSQHTRNLRCMHDAPQDVLV CEEEEEECCCCCEEHHHHHHHHCCCEEEEEECCCHHHCCCCCCCCCCEEEECCCCHHHHH ESYPEEEFWQDLWRVTDGNTNEALARLVIRTSSQCRDWMRKHGVNFQPPLSGALHVARTN HCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCEEEEECC AFFMGGGKALVNAYYRSAERLGVQIRYNTPVHALELHDGEFVAALAGSERITAKACVLAA EEEECCCHHHHHHHHHHHHHCEEEEEECCCEEEEEECCCCEEEEECCCCCEEEEEEEEEE GGFESNREWLREAWGENARGEWPADNFLIRGTRFNQGVLLKFMMDAGADIIGDPSQSHCV CCCCCHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCEEEEEHHCCCCCCCCCCCCCEE AIDARAPLYDGGICTRVDCVSLGIVVNRDAERFYDEGEDFWPKRYAIWGRLVAQQPGQIG EEECCCCEECCCCEEEEEEEEEEEEEECCHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCC YSIIDSKAIGHFMPPVFPGAQANTLAELACQLGLDAEKFTHTVTQYNQACQPGHFDHTLL HHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHH DDCATKNLTPAKTHWARPLDAPPYYGYALRPGITFTYLGLKVNERAAVHFAGHPSRNLFV HHHHCCCCCCCHHHCCCCCCCCCCCCEEECCCCEEEEEEEEECCCEEEEECCCCCCCEEE AGEMMAGNVLGKGYTAGVGMSIGTTFGRIAGIEAARAAHKEAQHETA EECEEECCCCCCCEECCCCCHHHCHHHHHHCHHHHHHHHHHHHCCCC >Mature Secondary Structure MVDVLVIGGGNAALCAALTAREAGASVLLLEAAPREWRGGNSQHTRNLRCMHDAPQDVLV CEEEEEECCCCCEEHHHHHHHHCCCEEEEEECCCHHHCCCCCCCCCCEEEECCCCHHHHH ESYPEEEFWQDLWRVTDGNTNEALARLVIRTSSQCRDWMRKHGVNFQPPLSGALHVARTN HCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCEEEEECC AFFMGGGKALVNAYYRSAERLGVQIRYNTPVHALELHDGEFVAALAGSERITAKACVLAA EEEECCCHHHHHHHHHHHHHCEEEEEECCCEEEEEECCCCEEEEECCCCCEEEEEEEEEE GGFESNREWLREAWGENARGEWPADNFLIRGTRFNQGVLLKFMMDAGADIIGDPSQSHCV CCCCCHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCEEEEEHHCCCCCCCCCCCCCEE AIDARAPLYDGGICTRVDCVSLGIVVNRDAERFYDEGEDFWPKRYAIWGRLVAQQPGQIG EEECCCCEECCCCEEEEEEEEEEEEEECCHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCC YSIIDSKAIGHFMPPVFPGAQANTLAELACQLGLDAEKFTHTVTQYNQACQPGHFDHTLL HHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHH DDCATKNLTPAKTHWARPLDAPPYYGYALRPGITFTYLGLKVNERAAVHFAGHPSRNLFV HHHHCCCCCCCHHHCCCCCCCCCCCCEEECCCCEEEEEEEEECCCEEEEECCCCCCCEEE AGEMMAGNVLGKGYTAGVGMSIGTTFGRIAGIEAARAAHKEAQHETA EECEEECCCCCCCEECCCCCHHHCHHHHHHCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10455032; 10581549 [H]