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The map label for this gene is ybhP [H]

Identifier: 194734200

GI number: 194734200

Start: 933680

End: 934438

Strand: Reverse

Name: ybhP [H]

Synonym: SeSA_A0961

Alternate gene names: 194734200

Gene position: 934438-933680 (Counterclockwise)

Preceding gene: 194736055

Following gene: 194736008

Centisome position: 19.84

GC content: 56.65

Gene sequence:

>759_bases
ATGACTCAACACACGCGAAATTTTTCATTCAAAGTGCTCACAATTAATACGCACAAAGGTTTTACCGCCTTTAATAAACG
CTTCATCCTGCCGGAGCTGCGCGACGCCGTCAGAACGGTCGGCGCCGATATCGTCTGTCTGCAAGAAGTGATGGGCGCGC
ATGAAGTACATCCGCTGCATATCGAAAACTGGCCGGACACTACCCACTATGAATTTTTGGCCGACACCATGTGGAGCGAT
TTCGCCTATGGCCGCAATGCGGTCTATCCGGAAGGCCACCACGGTAACGCGGTTCTTTCTCGCTATCCCATTGAACATTA
TGAAAATCGCGACGTCTCGGTCGGCGGTAGCGAAAAACGCGGCGTGCTCTATTGCCGCATTACGCCGCCCATGCTCAACC
GCCCTATCCACGTCATGTGCGTACATCTCGGCCTGCGGGAGAGCCACCGCCAGGCACAGCTAACCATGCTGGCGGGATGG
GTGAATGCCTTGCCGGAATCAGAACCGGTGCTGGTGGCCGGAGACTTTAATGACTGGCGGCAAAAGGCCGGCCCGCCGTT
AAACGCGGCCGGGTTGGAGGAGATATTCACCCGTGCCCATGGCCGACCGGCGCGCACATTCCCGGTGAGTATGCCGCTGC
TGCGACTCGATCGTATTTACGTCAAGAATGCGAACGCCAGTTCTCCTACGGCGCTACCGCTGCGGAACTGGCGACATTTA
TCAGACCATGCCCCCCTTAGCGCGGAGATCCATCTATGA

Upstream 100 bases:

>100_bases
TTCAGAGTACCGAACTTTACGGAAAATTCCGTAAGACCGCATCTTTTTGTGACGACGACTACACTATTTCAATCAGGATA
GTGACGCGGACAGGAAGAAA

Downstream 100 bases:

>100_bases
AATGCGGCTGGCGTGAAGGTAATCAAATTCAGCTACTGGAAAACGGCGACCAGTTCTATCCTGCCGTGTTTGAGGCTATC
GCTCAGGCACAGCAAAAAAT

Product: endonuclease/exonuclease/phosphatase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MTQHTRNFSFKVLTINTHKGFTAFNKRFILPELRDAVRTVGADIVCLQEVMGAHEVHPLHIENWPDTTHYEFLADTMWSD
FAYGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVGGSEKRGVLYCRITPPMLNRPIHVMCVHLGLRESHRQAQLTMLAGW
VNALPESEPVLVAGDFNDWRQKAGPPLNAAGLEEIFTRAHGRPARTFPVSMPLLRLDRIYVKNANASSPTALPLRNWRHL
SDHAPLSAEIHL

Sequences:

>Translated_252_residues
MTQHTRNFSFKVLTINTHKGFTAFNKRFILPELRDAVRTVGADIVCLQEVMGAHEVHPLHIENWPDTTHYEFLADTMWSD
FAYGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVGGSEKRGVLYCRITPPMLNRPIHVMCVHLGLRESHRQAQLTMLAGW
VNALPESEPVLVAGDFNDWRQKAGPPLNAAGLEEIFTRAHGRPARTFPVSMPLLRLDRIYVKNANASSPTALPLRNWRHL
SDHAPLSAEIHL
>Mature_251_residues
TQHTRNFSFKVLTINTHKGFTAFNKRFILPELRDAVRTVGADIVCLQEVMGAHEVHPLHIENWPDTTHYEFLADTMWSDF
AYGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVGGSEKRGVLYCRITPPMLNRPIHVMCVHLGLRESHRQAQLTMLAGWV
NALPESEPVLVAGDFNDWRQKAGPPLNAAGLEEIFTRAHGRPARTFPVSMPLLRLDRIYVKNANASSPTALPLRNWRHLS
DHAPLSAEIHL

Specific function: Unknown

COG id: COG3568

COG function: function code R; Metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787008, Length=253, Percent_Identity=86.5612648221344, Blast_Score=460, Evalue=1e-131,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005135 [H]

Pfam domain/function: PF03372 Exo_endo_phos [H]

EC number: NA

Molecular weight: Translated: 28577; Mature: 28446

Theoretical pI: Translated: 8.17; Mature: 8.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQHTRNFSFKVLTINTHKGFTAFNKRFILPELRDAVRTVGADIVCLQEVMGAHEVHPLH
CCCCCCCCEEEEEEEECCCCCHHHCCEECCHHHHHHHHHHCCHHHHHHHHHCCCCCCEEE
IENWPDTTHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVGGSEKR
ECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCHHHCCCCCEECCCCCCC
GVLYCRITPPMLNRPIHVMCVHLGLRESHRQAQLTMLAGWVNALPESEPVLVAGDFNDWR
CEEEEEECCHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHH
QKAGPPLNAAGLEEIFTRAHGRPARTFPVSMPLLRLDRIYVKNANASSPTALPLRNWRHL
HHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHCEEEEECCCCCCCCCCCCCCCCCC
SDHAPLSAEIHL
CCCCCCEEEEEC
>Mature Secondary Structure 
TQHTRNFSFKVLTINTHKGFTAFNKRFILPELRDAVRTVGADIVCLQEVMGAHEVHPLH
CCCCCCCEEEEEEEECCCCCHHHCCEECCHHHHHHHHHHCCHHHHHHHHHCCCCCCEEE
IENWPDTTHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVGGSEKR
ECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCHHHCCCCCEECCCCCCC
GVLYCRITPPMLNRPIHVMCVHLGLRESHRQAQLTMLAGWVNALPESEPVLVAGDFNDWR
CEEEEEECCHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHH
QKAGPPLNAAGLEEIFTRAHGRPARTFPVSMPLLRLDRIYVKNANASSPTALPLRNWRHL
HHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHCEEEEECCCCCCCCCCCCCCCCCC
SDHAPLSAEIHL
CCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]