| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
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The map label for this gene is dinG [H]
Identifier: 194734106
GI number: 194734106
Start: 942469
End: 944613
Strand: Direct
Name: dinG [H]
Synonym: SeSA_A0969
Alternate gene names: 194734106
Gene position: 942469-944613 (Clockwise)
Preceding gene: 194735725
Following gene: 194734700
Centisome position: 20.01
GC content: 54.55
Gene sequence:
>2145_bases ATGGCATTGACCGCTGCGCTGAAAGCGCAAATCGCCGCCTGGTATAAGGCGCTTCAGGACCAGATCCCCGACTTTATTCC CCGTGCGCCGCAGCGGCAGATGATTGCTGACGTCGCCAGAACGCTGGCTGGGGAAGAAGGGAGACATCTGGCTATTGAAG CGCCGACCGGCGTCGGGAAAACCCTCTCCTATCTTATTCCCGGTATTGCCATTGCCCGGGAAGAGCAAAAAACACTGGTG GTCAGTACCGCTAACGTGGCGTTACAGGATCAGATCTTTAGCAAAGATTTGCCGCTGCTACGAAAAATCATCCCCGATCT GCGTTTTACCGCCGCCTTTGGCCGCGGGCGCTACGTGTGTCCGCGAAACCTGGCGGCGCTCGCCAGTAGCGAGCCTACGC AGCAGGATCTGCTCGCCTTTCTTGATGACGAACTGACGCCTAACAACCAGGAAGAGCAAAAGCGCTGCGCCAGGCTGAAA GGGGATCTTGACGGTTACAAATGGGATGGTCTGCGGGATCATACCGACATTGCTATTGACGACGATCTGTGGCGGCGATT AAGTACCGATAAAGCCAGTTGTCTGAACCGCAACTGTCACTATTACCGCGAATGTCCATTCTTTGTCGCCCGACGTGAAA TACAGGAAGCGGAAGTCGTGGTGGCGAATCACGCGCTGGTAATGGCGGCGATGGAAAGTGAAGCCGTACTGCCGGAACCA AAGCATCTGCTGTTGGTACTGGATGAAGGTCATCATCTGCCCGATGTCGCTCGCGATGCGCTGGAGATGAGCGCGGAAAT TACCGCCTCCTGGTATCGCTTGCAACTGGATCTGTTCAGCAAACTGGTGGCGACCTGCATGGAGCAATTTCGCCCTAAAA CCACGCCGCCGTTAGCGAATCCTGAGCGACTTAACGCCCATTGCGAGGAGGTATACGAACTGATCGCCTCGCTCAATGCC ATTCTTAATCTGTATATGCCCGCAGCGCAGGAGGCGGAGCACCGTTTTGCAATGGGCGAGTTGCCTGATGAGGTCATGGA AATCTGTCAGCGACTGGCGAAGCTGACCGAGACGCTGCGTGGGCTGGCGGAATCCTTTCTCAACGATCTCAGCGAAAAAA CCGGGTCGCACGATATTGTGCGTTTGCATCGGGTGATTTTACAGATGAACCGGGCGCTGGGAATGTTCGAGGCGCAAAGT AAATTATGGCGGCTGGCTTCGATGGCGCAGTCTTCAGGCGCGCCGGTGTCCAAATGGGCGACGCGTGAAATACGCGAAGG GCAACTCCACGTCTGGTTCCATTGTGTCGGTATCCGCGTCAGCGATCAGCTGGAAAGATTGTTATGGCGCAGCGTACCGC ACATTATTGTCACCTCGGCGACACTGCGCTCGCTCAATAGCTTTTCGCGCCTGCAGGAAATGAGCGGCTTAAAAGAAAAA GCCGGCGACCGCTTTGTGGCGCTGGATTCGCCGTTTAATCATGTGGAACAGGGGAAACTGGTGATTCCTCAAATGCGCTA CGAACCCACCATTGATAACGAAGAGCAGCATATTGCCGAAATGGCGACCTATTTTCGTGAGCAACTGGAGAGCAAAAAAC ATCATGGTATGCTGGTACTGTTTGCCAGCGGGCGGGCGATGCAGCGTTTTCTGGAGCATGTCGCTGATGTGCGCTTACTC CTCCTGGTTCAGGGCGACCAGCCGCGTTACCGGCTGGTGGAGCTACACCGTAAACGGGTGGAGAGCGGCGAACGCAGCGT GCTGGTTGGGCTTCAGTCTTTTGCCGAAGGGCTGGATCTTAAAGGCGAGCTGCTGACGCAGGTCCATATCCATAAAATTG CCTTCCCGCCGATCGACAGCCCGGTTGTGATCACCGAAGGCGAATGGCTAAAAAGCCTGAATCGTTATCCGTTTGAGGTA CAAAGCTTACCAAGCGCGTCTTTTAATTTAATTCAGCAGGTAGGGCGATTGATCCGTAGCCATGCCTGTCGGGGAGAAGT GGTCATTTATGATAAGCGGTTGTTGACCAAAAACTACGGACAGCGTTTACTGAATGCCTTACCTGTTTTTCCGATAGAGC AGCCTGCCGTGCCAGACGTTATAGTAAAACCAAAAGCAAAACCTGCACGCCGCCGACGGCGTTAA
Upstream 100 bases:
>100_bases TCGCGTTGCGAGCCGCCTTCCAGAACCGGTAAAAAAGGTACTTCCCGCCCCTGAAATGTGACACAATAGTGGCTGTTTAT ACAGTACTTCAGGTTTTCTC
Downstream 100 bases:
>100_bases TGCTGTGAGCACACTTCAAGGAGCTTTCAATGGATTATCGCAAGATCATCAAAGAGATCGGGCGAGGTAAAAATCACGCC CGCGATCTGGATCTGGACAC
Product: ATP-dependent DNA helicase DinG
Products: NA
Alternate protein names: DNA-damage-inducible protein G [H]
Number of amino acids: Translated: 714; Mature: 713
Protein sequence:
>714_residues MALTAALKAQIAAWYKALQDQIPDFIPRAPQRQMIADVARTLAGEEGRHLAIEAPTGVGKTLSYLIPGIAIAREEQKTLV VSTANVALQDQIFSKDLPLLRKIIPDLRFTAAFGRGRYVCPRNLAALASSEPTQQDLLAFLDDELTPNNQEEQKRCARLK GDLDGYKWDGLRDHTDIAIDDDLWRRLSTDKASCLNRNCHYYRECPFFVARREIQEAEVVVANHALVMAAMESEAVLPEP KHLLLVLDEGHHLPDVARDALEMSAEITASWYRLQLDLFSKLVATCMEQFRPKTTPPLANPERLNAHCEEVYELIASLNA ILNLYMPAAQEAEHRFAMGELPDEVMEICQRLAKLTETLRGLAESFLNDLSEKTGSHDIVRLHRVILQMNRALGMFEAQS KLWRLASMAQSSGAPVSKWATREIREGQLHVWFHCVGIRVSDQLERLLWRSVPHIIVTSATLRSLNSFSRLQEMSGLKEK AGDRFVALDSPFNHVEQGKLVIPQMRYEPTIDNEEQHIAEMATYFREQLESKKHHGMLVLFASGRAMQRFLEHVADVRLL LLVQGDQPRYRLVELHRKRVESGERSVLVGLQSFAEGLDLKGELLTQVHIHKIAFPPIDSPVVITEGEWLKSLNRYPFEV QSLPSASFNLIQQVGRLIRSHACRGEVVIYDKRLLTKNYGQRLLNALPVFPIEQPAVPDVIVKPKAKPARRRRR
Sequences:
>Translated_714_residues MALTAALKAQIAAWYKALQDQIPDFIPRAPQRQMIADVARTLAGEEGRHLAIEAPTGVGKTLSYLIPGIAIAREEQKTLV VSTANVALQDQIFSKDLPLLRKIIPDLRFTAAFGRGRYVCPRNLAALASSEPTQQDLLAFLDDELTPNNQEEQKRCARLK GDLDGYKWDGLRDHTDIAIDDDLWRRLSTDKASCLNRNCHYYRECPFFVARREIQEAEVVVANHALVMAAMESEAVLPEP KHLLLVLDEGHHLPDVARDALEMSAEITASWYRLQLDLFSKLVATCMEQFRPKTTPPLANPERLNAHCEEVYELIASLNA ILNLYMPAAQEAEHRFAMGELPDEVMEICQRLAKLTETLRGLAESFLNDLSEKTGSHDIVRLHRVILQMNRALGMFEAQS KLWRLASMAQSSGAPVSKWATREIREGQLHVWFHCVGIRVSDQLERLLWRSVPHIIVTSATLRSLNSFSRLQEMSGLKEK AGDRFVALDSPFNHVEQGKLVIPQMRYEPTIDNEEQHIAEMATYFREQLESKKHHGMLVLFASGRAMQRFLEHVADVRLL LLVQGDQPRYRLVELHRKRVESGERSVLVGLQSFAEGLDLKGELLTQVHIHKIAFPPIDSPVVITEGEWLKSLNRYPFEV QSLPSASFNLIQQVGRLIRSHACRGEVVIYDKRLLTKNYGQRLLNALPVFPIEQPAVPDVIVKPKAKPARRRRR >Mature_713_residues ALTAALKAQIAAWYKALQDQIPDFIPRAPQRQMIADVARTLAGEEGRHLAIEAPTGVGKTLSYLIPGIAIAREEQKTLVV STANVALQDQIFSKDLPLLRKIIPDLRFTAAFGRGRYVCPRNLAALASSEPTQQDLLAFLDDELTPNNQEEQKRCARLKG DLDGYKWDGLRDHTDIAIDDDLWRRLSTDKASCLNRNCHYYRECPFFVARREIQEAEVVVANHALVMAAMESEAVLPEPK HLLLVLDEGHHLPDVARDALEMSAEITASWYRLQLDLFSKLVATCMEQFRPKTTPPLANPERLNAHCEEVYELIASLNAI LNLYMPAAQEAEHRFAMGELPDEVMEICQRLAKLTETLRGLAESFLNDLSEKTGSHDIVRLHRVILQMNRALGMFEAQSK LWRLASMAQSSGAPVSKWATREIREGQLHVWFHCVGIRVSDQLERLLWRSVPHIIVTSATLRSLNSFSRLQEMSGLKEKA GDRFVALDSPFNHVEQGKLVIPQMRYEPTIDNEEQHIAEMATYFREQLESKKHHGMLVLFASGRAMQRFLEHVADVRLLL LVQGDQPRYRLVELHRKRVESGERSVLVGLQSFAEGLDLKGELLTQVHIHKIAFPPIDSPVVITEGEWLKSLNRYPFEVQ SLPSASFNLIQQVGRLIRSHACRGEVVIYDKRLLTKNYGQRLLNALPVFPIEQPAVPDVIVKPKAKPARRRRR
Specific function: Probable helicase involved in DNA repair and perhaps also replication [H]
COG id: COG1199
COG function: function code KL; Rad3-related DNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1787018, Length=716, Percent_Identity=91.6201117318436, Blast_Score=1359, Evalue=0.0, Organism=Escherichia coli, GI1788110, Length=711, Percent_Identity=27.9887482419128, Blast_Score=201, Evalue=2e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR010614 - InterPro: IPR011545 - InterPro: IPR014013 - InterPro: IPR006555 - InterPro: IPR001650 [H]
Pfam domain/function: PF00270 DEAD; PF06733 DEAD_2 [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 81011; Mature: 80879
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALTAALKAQIAAWYKALQDQIPDFIPRAPQRQMIADVARTLAGEEGRHLAIEAPTGVGK CCCHHHHHHHHHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHH TLSYLIPGIAIAREEQKTLVVSTANVALQDQIFSKDLPLLRKIIPDLRFTAAFGRGRYVC HHHHHHCCHHEECCCCCEEEEEECCHHHHHHHHHCCHHHHHHHCCHHHHHHHCCCCCCCC PRNLAALASSEPTQQDLLAFLDDELTPNNQEEQKRCARLKGDLDGYKWDGLRDHTDIAID CCHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEC DDLWRRLSTDKASCLNRNCHYYRECPFFVARREIQEAEVVVANHALVMAAMESEAVLPEP HHHHHHHCCCHHHHHCCCCCHHHCCHHHHHHHHHHHHHEEHCCCCEEEEECCCCCCCCCC KHLLLVLDEGHHLPDVARDALEMSAEITASWYRLQLDLFSKLVATCMEQFRPKTTPPLAN CEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC PERLNAHCEEVYELIASLNAILNLYMPAAQEAEHRFAMGELPDEVMEICQRLAKLTETLR HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH GLAESFLNDLSEKTGSHDIVRLHRVILQMNRALGMFEAQSKLWRLASMAQSSGAPVSKWA HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH TREIREGQLHVWFHCVGIRVSDQLERLLWRSVPHIIVTSATLRSLNSFSRLQEMSGLKEK HHHHHCCCEEEEEEEEECCHHHHHHHHHHHCCCHHEEHHHHHHHHHHHHHHHHHHCHHHH AGDRFVALDSPFNHVEQGKLVIPQMRYEPTIDNEEQHIAEMATYFREQLESKKHHGMLVL CCCEEEEECCCCCHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHCCEEEE FASGRAMQRFLEHVADVRLLLLVQGDQPRYRLVELHRKRVESGERSVLVGLQSFAEGLDL EECCHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC KGELLTQVHIHKIAFPPIDSPVVITEGEWLKSLNRYPFEVQSLPSASFNLIQQVGRLIRS CHHHHHHHHHHHEECCCCCCCEEEECCHHHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHH HACRGEVVIYDKRLLTKNYGQRLLNALPVFPIEQPAVPDVIVKPKAKPARRRRR HCCCCCEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCHHHCCC >Mature Secondary Structure ALTAALKAQIAAWYKALQDQIPDFIPRAPQRQMIADVARTLAGEEGRHLAIEAPTGVGK CCHHHHHHHHHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHH TLSYLIPGIAIAREEQKTLVVSTANVALQDQIFSKDLPLLRKIIPDLRFTAAFGRGRYVC HHHHHHCCHHEECCCCCEEEEEECCHHHHHHHHHCCHHHHHHHCCHHHHHHHCCCCCCCC PRNLAALASSEPTQQDLLAFLDDELTPNNQEEQKRCARLKGDLDGYKWDGLRDHTDIAID CCHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEC DDLWRRLSTDKASCLNRNCHYYRECPFFVARREIQEAEVVVANHALVMAAMESEAVLPEP HHHHHHHCCCHHHHHCCCCCHHHCCHHHHHHHHHHHHHEEHCCCCEEEEECCCCCCCCCC KHLLLVLDEGHHLPDVARDALEMSAEITASWYRLQLDLFSKLVATCMEQFRPKTTPPLAN CEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC PERLNAHCEEVYELIASLNAILNLYMPAAQEAEHRFAMGELPDEVMEICQRLAKLTETLR HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH GLAESFLNDLSEKTGSHDIVRLHRVILQMNRALGMFEAQSKLWRLASMAQSSGAPVSKWA HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH TREIREGQLHVWFHCVGIRVSDQLERLLWRSVPHIIVTSATLRSLNSFSRLQEMSGLKEK HHHHHCCCEEEEEEEEECCHHHHHHHHHHHCCCHHEEHHHHHHHHHHHHHHHHHHCHHHH AGDRFVALDSPFNHVEQGKLVIPQMRYEPTIDNEEQHIAEMATYFREQLESKKHHGMLVL CCCEEEEECCCCCHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHCCEEEE FASGRAMQRFLEHVADVRLLLLVQGDQPRYRLVELHRKRVESGERSVLVGLQSFAEGLDL EECCHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC KGELLTQVHIHKIAFPPIDSPVVITEGEWLKSLNRYPFEVQSLPSASFNLIQQVGRLIRS CHHHHHHHHHHHEECCCCCCCEEEECCHHHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHH HACRGEVVIYDKRLLTKNYGQRLLNALPVFPIEQPAVPDVIVKPKAKPARRRRR HCCCCCEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]