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The map label for this gene is rcsF [H]

Identifier: 194734051

GI number: 194734051

Start: 287419

End: 287550

Strand: Reverse

Name: rcsF [H]

Synonym: SeSA_A0271

Alternate gene names: 194734051

Gene position: 287550-287419 (Counterclockwise)

Preceding gene: 194736374

Following gene: 194734251

Centisome position: 6.11

GC content: 51.52

Gene sequence:

>132_bases
ATGCAGATTAATGCATCTAAAATGAAAGCCAACGCCGTCCTGCTGCACAGCTGTGAAATTACCAGCGGCACGCCAGGCTG
CTATCGTCAGGCGGTTTGTATCGGGTCCGCCCTGAATATTTCGGCGAAATGA

Upstream 100 bases:

>100_bases
AGTCGGCAAACCTTTCCGCGATCTTGGCGAGGTTAGCGGCGAATCCTGCCAGGCGACAAATCAAGACTCTCCGCCTAACA
TTCCAACTGCGCGCAAGCGT

Downstream 100 bases:

>100_bases
GCAGCTTTCAGTTTGAACAAATCGGCGTTATTCGCTCCCCCTATAAAGAAAAATTCGCCGTTCCGCGCCAGCCCGGTCTG
GTCAAAAGCGCCTGCGGCGA

Product: exopolysaccharide synthesis regulator RcsF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 43; Mature: 43

Protein sequence:

>43_residues
MQINASKMKANAVLLHSCEITSGTPGCYRQAVCIGSALNISAK

Sequences:

>Translated_43_residues
MQINASKMKANAVLLHSCEITSGTPGCYRQAVCIGSALNISAK
>Mature_43_residues
MQINASKMKANAVLLHSCEITSGTPGCYRQAVCIGSALNISAK

Specific function: Essential component of the Rcs signaling system to promote transcription of the genes for colanic acid capsule synthesis. Together with rcsC, they probably promote the phosphorylation of rcsB [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786394, Length=43, Percent_Identity=95.3488372093023, Blast_Score=90, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4481; Mature: 4481

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
11.6 %Cys+Met (Translated Protein)
7.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
11.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQINASKMKANAVLLHSCEITSGTPGCYRQAVCIGSALNISAK
CCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEECCCEEEEECC
>Mature Secondary Structure
MQINASKMKANAVLLHSCEITSGTPGCYRQAVCIGSALNISAK
CCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEECCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Stimulates colanic acid capsule synthesis [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]