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The map label for this gene is yjbQ [H]

Identifier: 194734034

GI number: 194734034

Start: 4362080

End: 4362496

Strand: Direct

Name: yjbQ [H]

Synonym: SeSA_A4499

Alternate gene names: 194734034

Gene position: 4362080-4362496 (Clockwise)

Preceding gene: 194734461

Following gene: 194735614

Centisome position: 92.63

GC content: 51.8

Gene sequence:

>417_bases
ATGTGGTATCAGCGCACCATTACACTGAGCGAGAAGCCGCGCGGGTTTCATCTGATAACAGATGAAATTATCGATAAATT
GTCTGGCTTACCGCCTGTCGAAACGGGTTTGCTGCATCTGTTGTTGCTACACACCTCGGCCTCGCTGACGCTAAACGAAA
ACTGCGATCCCACCGTGCGCGCTGATATGGAGCGCCATTTCCTGAAAACCGTTCCCGATAATGCGGCGTATGAACATGAT
TACGAAGGCGCGGATGACATGCCTTCGCATATTAAGTCGTCAGTATTGGGCGTCTCGTTGCTGCTGCCTGTACGCCAGGG
GCGTTTACAGTTAGGAACATGGCAAGGTATCTGGTTGGGAGAGCACCGTATTCACGGCGGTCCACGTAAAATCATCGCGA
CACTACAAGGGGAATGA

Upstream 100 bases:

>100_bases
TTTGCATGATTTTTGCACAAACTTGCCCCGCTGGCTTTTACCTTTTCCAGACTTGCTGCACACTATTCAGGAGACGTTTG
TTTTTAGGAAGGAGCAGCCT

Downstream 100 bases:

>100_bases
TAATGACCATTTCGGAATTACTGCAATACTGCATGGCAAAACCTGGCGCAGAGCAGAGCGTCCACAGCGACTGGAAAGCG
ACGCAAATTAAAGTGGAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MWYQRTITLSEKPRGFHLITDEIIDKLSGLPPVETGLLHLLLLHTSASLTLNENCDPTVRADMERHFLKTVPDNAAYEHD
YEGADDMPSHIKSSVLGVSLLLPVRQGRLQLGTWQGIWLGEHRIHGGPRKIIATLQGE

Sequences:

>Translated_138_residues
MWYQRTITLSEKPRGFHLITDEIIDKLSGLPPVETGLLHLLLLHTSASLTLNENCDPTVRADMERHFLKTVPDNAAYEHD
YEGADDMPSHIKSSVLGVSLLLPVRQGRLQLGTWQGIWLGEHRIHGGPRKIIATLQGE
>Mature_138_residues
MWYQRTITLSEKPRGFHLITDEIIDKLSGLPPVETGLLHLLLLHTSASLTLNENCDPTVRADMERHFLKTVPDNAAYEHD
YEGADDMPSHIKSSVLGVSLLLPVRQGRLQLGTWQGIWLGEHRIHGGPRKIIATLQGE

Specific function: Unknown

COG id: COG0432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0047 family [H]

Homologues:

Organism=Escherichia coli, GI1790491, Length=138, Percent_Identity=78.9855072463768, Blast_Score=234, Evalue=2e-63,
Organism=Drosophila melanogaster, GI221476594, Length=136, Percent_Identity=51.4705882352941, Blast_Score=150, Evalue=2e-37,
Organism=Drosophila melanogaster, GI221476589, Length=136, Percent_Identity=51.4705882352941, Blast_Score=149, Evalue=5e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001602 [H]

Pfam domain/function: PF01894 UPF0047 [H]

EC number: NA

Molecular weight: Translated: 15496; Mature: 15496

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS01314 UPF0047

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWYQRTITLSEKPRGFHLITDEIIDKLSGLPPVETGLLHLLLLHTSASLTLNENCDPTVR
CCCEEEEEECCCCCCEEEEHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCHH
ADMERHFLKTVPDNAAYEHDYEGADDMPSHIKSSVLGVSLLLPVRQGRLQLGTWQGIWLG
HHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEECCCCEEEECCCCCEEEC
EHRIHGGPRKIIATLQGE
CCEECCCCEEEEEEECCC
>Mature Secondary Structure
MWYQRTITLSEKPRGFHLITDEIIDKLSGLPPVETGLLHLLLLHTSASLTLNENCDPTVR
CCCEEEEEECCCCCCEEEEHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCHH
ADMERHFLKTVPDNAAYEHDYEGADDMPSHIKSSVLGVSLLLPVRQGRLQLGTWQGIWLG
HHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEECCCCEEEECCCCCEEEC
EHRIHGGPRKIIATLQGE
CCEECCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10564784; 11677608; 12644504 [H]