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The map label for this gene is 194335090

Identifier: 194335090

GI number: 194335090

Start: 2484773

End: 2485138

Strand: Reverse

Name: 194335090

Synonym: Paes_2307

Alternate gene names: NA

Gene position: 2485138-2484773 (Counterclockwise)

Preceding gene: 194335093

Following gene: 194335088

Centisome position: 98.89

GC content: 51.64

Gene sequence:

>366_bases
GTGGTCCGGTTTTTCGGGCTCACGTCCGGAGCACGTGAAGTTAAAAAAAGATCTTGGGGATCTCTGACCGCGTCCTGGGT
TCCCCATGATATTCGCGATGCCGGGATCGACTTTGTCCAGTACTGGACCGGGAAGAGCGGCATCGCTGTGACGCGATTTA
TCCAATGGCTGGGCATTGCTACCAGCAAGTATTACAGCTGGCAGAACCGCTACGGCAAGGTAAATGAACATAATGGCCTG
ATACCCCGCGACTTCTGGCTCGAAGAGTGGGAAAAGCAGGCGATTATCAATTTCCATACACAATACCCTCTGGAGGGATA
CCGTCGTTTGACCTACATGATGCTTGTCAGGATATTGTTGCCGTAA

Upstream 100 bases:

>100_bases
GGCTTCTTTCAGGATCCCGATGATCTGTTCCGTGCTGTAACGCTTGGTTTTCATGACCTATTCCTCCTTGGTTGAGTTTA
AGCTTTTTTTCTACAACCAA

Downstream 100 bases:

>100_bases
GCCCCATCCTATGCACTACGGGACGTTGTTGATTAGGTGAAATAACGGCATTGCAGGAGGTTTTTCCCGACTTCGGCCAA
TGAGTGCGAAGGCTTGAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: Integrase

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MVRFFGLTSGAREVKKRSWGSLTASWVPHDIRDAGIDFVQYWTGKSGIAVTRFIQWLGIATSKYYSWQNRYGKVNEHNGL
IPRDFWLEEWEKQAIINFHTQYPLEGYRRLTYMMLVRILLP

Sequences:

>Translated_121_residues
MVRFFGLTSGAREVKKRSWGSLTASWVPHDIRDAGIDFVQYWTGKSGIAVTRFIQWLGIATSKYYSWQNRYGKVNEHNGL
IPRDFWLEEWEKQAIINFHTQYPLEGYRRLTYMMLVRILLP
>Mature_121_residues
MVRFFGLTSGAREVKKRSWGSLTASWVPHDIRDAGIDFVQYWTGKSGIAVTRFIQWLGIATSKYYSWQNRYGKVNEHNGL
IPRDFWLEEWEKQAIINFHTQYPLEGYRRLTYMMLVRILLP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14362; Mature: 14362

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRFFGLTSGAREVKKRSWGSLTASWVPHDIRDAGIDFVQYWTGKSGIAVTRFIQWLGIA
CEEEECCCCCHHHHHHHCCCCCCCCCCCCHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHH
TSKYYSWQNRYGKVNEHNGLIPRDFWLEEWEKQAIINFHTQYPLEGYRRLTYMMLVRILL
HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHC
P
C
>Mature Secondary Structure
MVRFFGLTSGAREVKKRSWGSLTASWVPHDIRDAGIDFVQYWTGKSGIAVTRFIQWLGIA
CEEEECCCCCHHHHHHHCCCCCCCCCCCCHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHH
TSKYYSWQNRYGKVNEHNGLIPRDFWLEEWEKQAIINFHTQYPLEGYRRLTYMMLVRILL
HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHC
P
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA