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The map label for this gene is rfbC [H]

Identifier: 194334871

GI number: 194334871

Start: 2258959

End: 2259819

Strand: Reverse

Name: rfbC [H]

Synonym: Paes_2074

Alternate gene names: 194334871

Gene position: 2259819-2258959 (Counterclockwise)

Preceding gene: 194334872

Following gene: 194334870

Centisome position: 89.93

GC content: 52.96

Gene sequence:

>861_bases
ATGAAGCATCAGAATCTTTTCTGTGTTGTCGTTGTCAACTGGAACAATGCTTCCGACACGCTTGGCTGCCTTGATTCACT
GCAGAAAGCAGGCAGAAAGGATATGCGCGTCCTTGTCGTTGACAACGGCTCGAAAGACGATTCACCAGAAGCGATTGAGG
AGGCTTTCCCGCAGTACGAGATCCTTCGCCTGGCAGAGAACAGGGGGTTCGGGGCCGGATGTAATGCAGGGGTTGAGCAT
GTTGGCAGGGGCGGGGCCGAGTTTGTCATATTTCTCAATAACGATACGCTTGTCGATCAGGGATTTCCCGGACCGCTGAT
CGAAGGATTGCAGCAGAACCCGGCGGCGGCAATTACTGTTCCGAAGATCTGTTATATGCATGAACCGGAGGTTGTCTGGT
ATGGCGGAGGCATAGCCGATCTTCTCTCCGGGCAGATCCGACATCGCGGTATTCGTGAGCCTGACGGGCCCGCATTCTCT
GTTTCAGAGGAAACCGGCTATGCGACGGGCTGCTGTATGGCGCTGCGTTTGGCTGATTTCAGTGCGCTTGGTGGATTTGA
TGAATCTTTCGGCATGTATGGAGAGGATGTCGATCTTTCCCTGAGAGCGAGGCGCTCAGGAAAGGTTATTCTCTATGTGC
CGTCCTCAACGATATTGCACCGGGTTTCGTCATCTCTTGGAGGTGAGCTCGGTTTTCGTAAACAGTGGAGAAAGCATAAG
GCGCTTTTGCGCCTGTTTGTTCAATACAGAGCATGGAAAGGGGGCCTTTGTTTCCTTGGCGGGATACCCTTGTATTTCCT
CAAAGGGCTTGTCAGCGTTGTCCGCTTCAGGCGCGATGTGATTGACGGGAGTGAACGATGA

Upstream 100 bases:

>100_bases
GGGAGAAGGTTACTTCTTCCATCGCTTCGTATTGCCGTGAGCATTCATGGGACCGTCTTGCCTCGGCAGTCGATGGCTTT
TTGCAGGAGGAAATCCTGGC

Downstream 100 bases:

>100_bases
AGATTATCGTTCAACAGGCCGGTGTGTCGTTTTCGGGATTGGTGACGGGGCAGATCCTGAGGTTTTTTCTCAATCTTGTT
ATTGCCAGGCTGCTTGGCGC

Product: family 2 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MKHQNLFCVVVVNWNNASDTLGCLDSLQKAGRKDMRVLVVDNGSKDDSPEAIEEAFPQYEILRLAENRGFGAGCNAGVEH
VGRGGAEFVIFLNNDTLVDQGFPGPLIEGLQQNPAAAITVPKICYMHEPEVVWYGGGIADLLSGQIRHRGIREPDGPAFS
VSEETGYATGCCMALRLADFSALGGFDESFGMYGEDVDLSLRARRSGKVILYVPSSTILHRVSSSLGGELGFRKQWRKHK
ALLRLFVQYRAWKGGLCFLGGIPLYFLKGLVSVVRFRRDVIDGSER

Sequences:

>Translated_286_residues
MKHQNLFCVVVVNWNNASDTLGCLDSLQKAGRKDMRVLVVDNGSKDDSPEAIEEAFPQYEILRLAENRGFGAGCNAGVEH
VGRGGAEFVIFLNNDTLVDQGFPGPLIEGLQQNPAAAITVPKICYMHEPEVVWYGGGIADLLSGQIRHRGIREPDGPAFS
VSEETGYATGCCMALRLADFSALGGFDESFGMYGEDVDLSLRARRSGKVILYVPSSTILHRVSSSLGGELGFRKQWRKHK
ALLRLFVQYRAWKGGLCFLGGIPLYFLKGLVSVVRFRRDVIDGSER
>Mature_286_residues
MKHQNLFCVVVVNWNNASDTLGCLDSLQKAGRKDMRVLVVDNGSKDDSPEAIEEAFPQYEILRLAENRGFGAGCNAGVEH
VGRGGAEFVIFLNNDTLVDQGFPGPLIEGLQQNPAAAITVPKICYMHEPEVVWYGGGIADLLSGQIRHRGIREPDGPAFS
VSEETGYATGCCMALRLADFSALGGFDESFGMYGEDVDLSLRARRSGKVILYVPSSTILHRVSSSLGGELGFRKQWRKHK
ALLRLFVQYRAWKGGLCFLGGIPLYFLKGLVSVVRFRRDVIDGSER

Specific function: Involved in O-antigen biosynthesis [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00534 Glycos_transf_1; PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 31403; Mature: 31403

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHQNLFCVVVVNWNNASDTLGCLDSLQKAGRKDMRVLVVDNGSKDDSPEAIEEAFPQYE
CCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHCCHHH
ILRLAENRGFGAGCNAGVEHVGRGGAEFVIFLNNDTLVDQGFPGPLIEGLQQNPAAAITV
HHHHHHCCCCCCCCCCCHHHHCCCCCEEEEEECCCEEECCCCCCHHHHHHHCCCCEEEEE
PKICYMHEPEVVWYGGGIADLLSGQIRHRGIREPDGPAFSVSEETGYATGCCMALRLADF
CCEEEECCCCEEEECCCHHHHHCCHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHH
SALGGFDESFGMYGEDVDLSLRARRSGKVILYVPSSTILHRVSSSLGGELGFRKQWRKHK
HHHCCCCHHCCCCCCCCCEEEEECCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHH
ALLRLFVQYRAWKGGLCFLGGIPLYFLKGLVSVVRFRRDVIDGSER
HHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKHQNLFCVVVVNWNNASDTLGCLDSLQKAGRKDMRVLVVDNGSKDDSPEAIEEAFPQYE
CCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHCCHHH
ILRLAENRGFGAGCNAGVEHVGRGGAEFVIFLNNDTLVDQGFPGPLIEGLQQNPAAAITV
HHHHHHCCCCCCCCCCCHHHHCCCCCEEEEEECCCEEECCCCCCHHHHHHHCCCCEEEEE
PKICYMHEPEVVWYGGGIADLLSGQIRHRGIREPDGPAFSVSEETGYATGCCMALRLADF
CCEEEECCCCEEEECCCHHHHHCCHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHH
SALGGFDESFGMYGEDVDLSLRARRSGKVILYVPSSTILHRVSSSLGGELGFRKQWRKHK
HHHCCCCHHCCCCCCCCCEEEEECCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHH
ALLRLFVQYRAWKGGLCFLGGIPLYFLKGLVSVVRFRRDVIDGSER
HHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8626291 [H]