Definition Prosthecochloris aestuarii DSM 271 chromosome, complete genome.
Accession NC_011059
Length 2,512,923

Click here to switch to the map view.

The map label for this gene is 194334869

Identifier: 194334869

GI number: 194334869

Start: 2255121

End: 2257475

Strand: Reverse

Name: 194334869

Synonym: Paes_2072

Alternate gene names: NA

Gene position: 2257475-2255121 (Counterclockwise)

Preceding gene: 194334870

Following gene: 194334868

Centisome position: 89.83

GC content: 54.1

Gene sequence:

>2355_bases
GTGAAGAACGCACTCCGTCCATATTTTCTGGTTGCTTTCGTTTTTTGCGCGATGGTTGCCACTCTCCTGTATCAGGTCCT
TTTTCTCGGTATGGTGCCGTCATCGCCAGACAGTACCGGACCGATGGCGACGTCGATGGCGCTCGACGCCCTGCGCGAAT
CTTCAGGCATGTACCCACTGTGGCAGCCATGGTCGTTTTCCGGTATGCCGACAGTCGAGGCATTTACCTATCTGAACGGG
CTCTATTATCCCGGTATCGCGCTCAGCTTGTTTCACATTGACGGTCTGCTCCTGCAACTCCTGCATCTCGTGTTTGCCGC
GATGGGGGGGTATGTGCTGCTTCGTTTTTTCAGACTGCGTCATATGGCCGCTTTTCTTGGGGGCGCGGCCTTCATGCTCA
ATCCCTATCTGGTGACGATGTTTGTCTACGGGCACGGCAGTCAGCTGATGAGTGCAGCCTATATGCCCTGGGTGTTCTGG
GCCGGCTTGAGGGTTCTCGATAGTCGAAAAATCTACGATATCGCTTTGCTGGCACTTTTTGCCGGCTTGCAGCTGCAGCG
GGCTCATGTGCAAATTGCCTATTATACCTGGATGTTTCTGTGTCTGCTGATAGTGATCAATGTCGTTGTCAGATATACAA
CTCTTCGTGAAACCGCCGGGAAACTGGCGGCAGTATCTCTGTCGCTTGTGCTTGCATTGGCATTGGCGGCGGCAGTCTAC
ATGCCTGCCCTGGCCTATACGCCGTTTTCGGTTCGCGGCGCTTCAGCTGGAGGCGGGGCAGCATACGGATATGCGACGAT
GTGGTCAATGCATCCGACCGAACTGCTGACCTTTCTGGTTCCCGGTTTTTTCGGTTTTGGCGGTATAGCGTACTGGGGAC
ACATGCCGTTTACCGATTTTCCCAATTATGCCGGTCTGATTATTCTGCTGCTTGCTCTTGGCGGGGCATGGGCCGGACGC
CGCGAGCCGTTTGTCTGGTTTCTGGTTTCCTCGATGCTCGTTGCTCTGTTGCTCTCATTCGGCAGTTTCTGGAGTCCGTT
GTATGACCTGTTCTACCATTTTGCGCCGTTTTTCAGCAGGTTTCGGGTGCCTTCGATGGTGCTGATCGTGGTCTCGCTCG
ACCTTTCACTGCTTGCGGGTTTCGGTTTGCACGCTCTCGGCAAGGGTCTTGATAAGGGCGCTATCAGGATCCTTAAAGGC
GGCTCGTTAGTGCTGGCTCTCTTTATTGTTTTTTTTCTTTTGTTCGAACCTTCCATCGAATCATGGTTCCGCAGCGCCTT
TCCTCTTCCCAATGTTGAGGGGGTGCAGCTTGTTCGTCTTATCGAGGATGCCCGTTGGAATCAGCTGAAAGGAAGCCTGC
AGGGCGTTGTCCTCGGTTCTGCCTTGTTTTGCGGGCTTCTCTGGCTTTCTATTCGTCAGGTTTTCTCCGACCGGGTAACA
CTGCTTTTCGTGGCGGCGTTAGCGCTTGGTGACATTCTGCTTGTCGATCGTCAGATTGTCGATCCGTCAAGGGACTCGTT
ACGTTCTTCGCAGCTTCAGGCGGAGGCTGTTCTTGACAAGGTGTTCAGTGATGGCGATGTGGCTGATTTTTTGAAAAACG
AACCGGGCATCTTCAGAATTTATCCCGCTGGCGGGCTTTTTGGTGAGAACCGTTTTGCGGCTGCCGGACTGGAGTCGGTC
GGAGGGTATCATCCGGCCAAAATAGCGCGTTATGATGCACTGCTGAAGCGAACAGCAAATCTTGCCGATACTGGTGTACT
TCGGATGCTCAATGTAGGTTATGTTATTGCTCCCTCTCCTCTTGATCATCCTGAGCTGGAGGGCGTTTATGAAGGAATGC
TTCGTCTTGTGCGGGGCAGGCAGGATGTTTGGGTTTACCGCCTCCGCGACCCTATGCCGAGAGCATGGTTTGCTCTGGGG
GCAACGGCATCAGAGTCTGCGGAACAGAGTCTTTCGGGTATGCTGCAAAGCTCGAGCGGTCCGGCTGAGATGGTGTTTGT
CGAGGATGGCGGATGGGAAGGGCAGAGATCGTTCGCCCGCGGAGAGGTGCTTGCAATCGATAGAGGTCCGGAACGGTTAT
CGATGAACGTCAGTTCGGAAGGAGATGCACTCCTTGTTGTAAGCGAGGTTTTTTACCCGCAGGGCTGGAAGGCTTCTATG
GACGGCTCTCCCGTCAGAGTCCACCCTGTCAACGGGGTTATCCGGGGAGTGCTTGTTCCTGAGGGTGAGCATCACATCGT
TTTCAGTTATGACCGTACGCTTTTTGAAAACGGGCGACGCTATAGCCTTGCGGCAGCCTTGCTGATAGTGATGCTCTTTG
CCGGCGGGACGCTACTGCGACGCAAGGCATCGTAA

Upstream 100 bases:

>100_bases
TCTATGCTGTGCTGATATGGATGATGAAGCTTGAGCATGAGGATCTCGAGATTATTGCAGATATGTTTCCTTTTCTGAAA
AAACAATCCTGAATGCGGCT

Downstream 100 bases:

>100_bases
CGGGTTTATCCTACAATTTAATTCTGACGGTTGTGAAGAAAATACTGTTTCTGACAAGGAATTTTCCTCCGATGATGACG
GAAGGCTCGACAAGAGCCTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 784; Mature: 784

Protein sequence:

>784_residues
MKNALRPYFLVAFVFCAMVATLLYQVLFLGMVPSSPDSTGPMATSMALDALRESSGMYPLWQPWSFSGMPTVEAFTYLNG
LYYPGIALSLFHIDGLLLQLLHLVFAAMGGYVLLRFFRLRHMAAFLGGAAFMLNPYLVTMFVYGHGSQLMSAAYMPWVFW
AGLRVLDSRKIYDIALLALFAGLQLQRAHVQIAYYTWMFLCLLIVINVVVRYTTLRETAGKLAAVSLSLVLALALAAAVY
MPALAYTPFSVRGASAGGGAAYGYATMWSMHPTELLTFLVPGFFGFGGIAYWGHMPFTDFPNYAGLIILLLALGGAWAGR
REPFVWFLVSSMLVALLLSFGSFWSPLYDLFYHFAPFFSRFRVPSMVLIVVSLDLSLLAGFGLHALGKGLDKGAIRILKG
GSLVLALFIVFFLLFEPSIESWFRSAFPLPNVEGVQLVRLIEDARWNQLKGSLQGVVLGSALFCGLLWLSIRQVFSDRVT
LLFVAALALGDILLVDRQIVDPSRDSLRSSQLQAEAVLDKVFSDGDVADFLKNEPGIFRIYPAGGLFGENRFAAAGLESV
GGYHPAKIARYDALLKRTANLADTGVLRMLNVGYVIAPSPLDHPELEGVYEGMLRLVRGRQDVWVYRLRDPMPRAWFALG
ATASESAEQSLSGMLQSSSGPAEMVFVEDGGWEGQRSFARGEVLAIDRGPERLSMNVSSEGDALLVVSEVFYPQGWKASM
DGSPVRVHPVNGVIRGVLVPEGEHHIVFSYDRTLFENGRRYSLAAALLIVMLFAGGTLLRRKAS

Sequences:

>Translated_784_residues
MKNALRPYFLVAFVFCAMVATLLYQVLFLGMVPSSPDSTGPMATSMALDALRESSGMYPLWQPWSFSGMPTVEAFTYLNG
LYYPGIALSLFHIDGLLLQLLHLVFAAMGGYVLLRFFRLRHMAAFLGGAAFMLNPYLVTMFVYGHGSQLMSAAYMPWVFW
AGLRVLDSRKIYDIALLALFAGLQLQRAHVQIAYYTWMFLCLLIVINVVVRYTTLRETAGKLAAVSLSLVLALALAAAVY
MPALAYTPFSVRGASAGGGAAYGYATMWSMHPTELLTFLVPGFFGFGGIAYWGHMPFTDFPNYAGLIILLLALGGAWAGR
REPFVWFLVSSMLVALLLSFGSFWSPLYDLFYHFAPFFSRFRVPSMVLIVVSLDLSLLAGFGLHALGKGLDKGAIRILKG
GSLVLALFIVFFLLFEPSIESWFRSAFPLPNVEGVQLVRLIEDARWNQLKGSLQGVVLGSALFCGLLWLSIRQVFSDRVT
LLFVAALALGDILLVDRQIVDPSRDSLRSSQLQAEAVLDKVFSDGDVADFLKNEPGIFRIYPAGGLFGENRFAAAGLESV
GGYHPAKIARYDALLKRTANLADTGVLRMLNVGYVIAPSPLDHPELEGVYEGMLRLVRGRQDVWVYRLRDPMPRAWFALG
ATASESAEQSLSGMLQSSSGPAEMVFVEDGGWEGQRSFARGEVLAIDRGPERLSMNVSSEGDALLVVSEVFYPQGWKASM
DGSPVRVHPVNGVIRGVLVPEGEHHIVFSYDRTLFENGRRYSLAAALLIVMLFAGGTLLRRKAS
>Mature_784_residues
MKNALRPYFLVAFVFCAMVATLLYQVLFLGMVPSSPDSTGPMATSMALDALRESSGMYPLWQPWSFSGMPTVEAFTYLNG
LYYPGIALSLFHIDGLLLQLLHLVFAAMGGYVLLRFFRLRHMAAFLGGAAFMLNPYLVTMFVYGHGSQLMSAAYMPWVFW
AGLRVLDSRKIYDIALLALFAGLQLQRAHVQIAYYTWMFLCLLIVINVVVRYTTLRETAGKLAAVSLSLVLALALAAAVY
MPALAYTPFSVRGASAGGGAAYGYATMWSMHPTELLTFLVPGFFGFGGIAYWGHMPFTDFPNYAGLIILLLALGGAWAGR
REPFVWFLVSSMLVALLLSFGSFWSPLYDLFYHFAPFFSRFRVPSMVLIVVSLDLSLLAGFGLHALGKGLDKGAIRILKG
GSLVLALFIVFFLLFEPSIESWFRSAFPLPNVEGVQLVRLIEDARWNQLKGSLQGVVLGSALFCGLLWLSIRQVFSDRVT
LLFVAALALGDILLVDRQIVDPSRDSLRSSQLQAEAVLDKVFSDGDVADFLKNEPGIFRIYPAGGLFGENRFAAAGLESV
GGYHPAKIARYDALLKRTANLADTGVLRMLNVGYVIAPSPLDHPELEGVYEGMLRLVRGRQDVWVYRLRDPMPRAWFALG
ATASESAEQSLSGMLQSSSGPAEMVFVEDGGWEGQRSFARGEVLAIDRGPERLSMNVSSEGDALLVVSEVFYPQGWKASM
DGSPVRVHPVNGVIRGVLVPEGEHHIVFSYDRTLFENGRRYSLAAALLIVMLFAGGTLLRRKAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 86191; Mature: 86191

Theoretical pI: Translated: 8.35; Mature: 8.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCC
>Mature Secondary Structure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CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA