| Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
|---|---|
| Accession | NC_011059 |
| Length | 2,512,923 |
Click here to switch to the map view.
The map label for this gene is 194334713
Identifier: 194334713
GI number: 194334713
Start: 2095403
End: 2095867
Strand: Reverse
Name: 194334713
Synonym: Paes_1914
Alternate gene names: NA
Gene position: 2095867-2095403 (Counterclockwise)
Preceding gene: 194334714
Following gene: 194334712
Centisome position: 83.4
GC content: 51.83
Gene sequence:
>465_bases ATGCCTATTCAGAAACTGAGAAATTTCCTTGATTCGCATCGTATCAAGTACTTTATCATCAGCCATTCGCCTGCCTACAC CGCCCAGGAGATCGCAGCATCTGCGCATGTGCCGGGAAAGGAGCTTGCCAAGACGGTGATGGTGACAATTGACGGGCGTC TTGCTATGGCGGTGCTTCCCGCGTCAGGAAAGCTTGATTTTACCATGCTTGAGCGGGTGGCATCGAGCAACGATGTACTT CTTGCTTCAGAGGAGGATTTCGCTGACATGTTTCCTGGCTGCGAAGTAGGGGCCATGCCCCCGTTCGGCAACCTGTTCGG TATGAAGACCTACGTTGACCGTGAACTGGCCAGAGATGAGGAGATCGTCTTCAATGCAGGAGACCATACGGAACTCCTCA GGCTTTCATTCAGGGACTATGAGCATCTTGTCCATCCTGTCATAGCCGATCTCGTCAAACGTTAA
Upstream 100 bases:
>100_bases ATTTTCCTCTTAAACGCTTACTGAACCGCCGTCGGTATCTCGGTTGCCGGCGGCGGTCCTTGTTGTATCGGGGGACTCTT TATCAACCAAAGGAGGGATT
Downstream 100 bases:
>100_bases TCCGGGGGAGAGTTGGTGAATGGTTGTCGCTGCGCGACAGGGGGAGGCAAGAGGCGAGAGACTAGAGACGAGAGACAAGA GACGAGAGGCAAGAGACAAG
Product: YbaK/prolyl-tRNA synthetase associated protein
Products: NA
Alternate protein names: YbaK/Aminoacyl-TRNA Synthetase Associated Region; YbaK-Like Protein; YbaK/Prolyl-TRNA Synthetase Domain-Containing Protein
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MPIQKLRNFLDSHRIKYFIISHSPAYTAQEIAASAHVPGKELAKTVMVTIDGRLAMAVLPASGKLDFTMLERVASSNDVL LASEEDFADMFPGCEVGAMPPFGNLFGMKTYVDRELARDEEIVFNAGDHTELLRLSFRDYEHLVHPVIADLVKR
Sequences:
>Translated_154_residues MPIQKLRNFLDSHRIKYFIISHSPAYTAQEIAASAHVPGKELAKTVMVTIDGRLAMAVLPASGKLDFTMLERVASSNDVL LASEEDFADMFPGCEVGAMPPFGNLFGMKTYVDRELARDEEIVFNAGDHTELLRLSFRDYEHLVHPVIADLVKR >Mature_153_residues PIQKLRNFLDSHRIKYFIISHSPAYTAQEIAASAHVPGKELAKTVMVTIDGRLAMAVLPASGKLDFTMLERVASSNDVLL ASEEDFADMFPGCEVGAMPPFGNLFGMKTYVDRELARDEEIVFNAGDHTELLRLSFRDYEHLVHPVIADLVKR
Specific function: Unknown
COG id: COG2606
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17208; Mature: 17077
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIQKLRNFLDSHRIKYFIISHSPAYTAQEIAASAHVPGKELAKTVMVTIDGRLAMAVLP CCHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHCCCCHHHHHHEEEEEECCCEEEEEEC ASGKLDFTMLERVASSNDVLLASEEDFADMFPGCEVGAMPPFGNLFGMKTYVDRELARDE CCCCCHHHHHHHHCCCCCEEEECCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC EIVFNAGDHTELLRLSFRDYEHLVHPVIADLVKR EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PIQKLRNFLDSHRIKYFIISHSPAYTAQEIAASAHVPGKELAKTVMVTIDGRLAMAVLP CHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHCCCCHHHHHHEEEEEECCCEEEEEEC ASGKLDFTMLERVASSNDVLLASEEDFADMFPGCEVGAMPPFGNLFGMKTYVDRELARDE CCCCCHHHHHHHHCCCCCEEEECCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC EIVFNAGDHTELLRLSFRDYEHLVHPVIADLVKR EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA