| Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
|---|---|
| Accession | NC_011059 |
| Length | 2,512,923 |
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The map label for this gene is 194334537
Identifier: 194334537
GI number: 194334537
Start: 1891006
End: 1891758
Strand: Reverse
Name: 194334537
Synonym: Paes_1732
Alternate gene names: NA
Gene position: 1891758-1891006 (Counterclockwise)
Preceding gene: 194334538
Following gene: 194334535
Centisome position: 75.28
GC content: 57.24
Gene sequence:
>753_bases ATGTTGATTTTTCATAAGGTGTTGCCGGTTTTTGTGTTGCCTCTTGGGTTGGGGATTGTTGTTGTTGTGTTGGGGGCTTT GTTTCGGCGGTGGTGGTTGGTTTGGTCTGGGGTTGGCTTGTTGTGGGTGTTGGGGATGCCGGTGACGGGTGATTGGATGA TGAGGATGGTTGAGGGGGTGGATCGGCGGGTTGATGTGGCGTTGCTTGAGCCGGCCGATGCGGTGGTGGTGCTTGGAGGG GTTACGGTTCAGGTGCCGGGTGTGCGCTATGGGGAGTGGGGCGATGCTGCGGACCGGTTTGAAGGGGGTGTTGAGGTGTT TCGGGGCGGGAAGGCTCCGCTGCTGGTGCTGACGGGGGCGAAGATGCCGTGGGCTCCTGATGCTCGTGTTGAGGGGGAGC TGTTGCGGGAGCGAGCTTTGTTGCTTGGCGTTCCGGAGGAGTCGGTCAGGGTGACGGGTCGGGTTGGCAATACGGCTGAT GAGGCACGGGAGGTGCGGAAGCTGCTGGCTGGAATTGCTCGGCCGAGGGTTATTCTGGTGACGAGTGCATTTCACATGCG TCGTGCGGCGATGCTGTTTCGCCATGCTGGTTTGCGTGTGGATGAGTTTCCTGTTGATTTCCGGACATCGTTTTACGATC GGTTGACGGTGATTGATTTTCTGCCGTGCGCTGACGGACTCGAAAACAGCGAGCTGGCTATACGGGAGATGATTGGGTGG TTGTATTATTTATTAGTGAATGGTGAATGGTGA
Upstream 100 bases:
>100_bases GCGCCGCGTGCGTCACGCGTCACTTGTCACTTGTCACCGCCCGAAGGGCTCGCCGCGCCGTAGGCGCAACTATTTACTTA TCACTTTTTCTCTTTCTATC
Downstream 100 bases:
>100_bases ATGGTGAATGGTGAATGGTGAATGGTGAATGGTGAATGGTGAATGGTGAATGGTGAATGGTGAATGGTGAATGTGGGAAT GCGCCTGCGGCGCGGTGACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MLIFHKVLPVFVLPLGLGIVVVVLGALFRRWWLVWSGVGLLWVLGMPVTGDWMMRMVEGVDRRVDVALLEPADAVVVLGG VTVQVPGVRYGEWGDAADRFEGGVEVFRGGKAPLLVLTGAKMPWAPDARVEGELLRERALLLGVPEESVRVTGRVGNTAD EAREVRKLLAGIARPRVILVTSAFHMRRAAMLFRHAGLRVDEFPVDFRTSFYDRLTVIDFLPCADGLENSELAIREMIGW LYYLLVNGEW
Sequences:
>Translated_250_residues MLIFHKVLPVFVLPLGLGIVVVVLGALFRRWWLVWSGVGLLWVLGMPVTGDWMMRMVEGVDRRVDVALLEPADAVVVLGG VTVQVPGVRYGEWGDAADRFEGGVEVFRGGKAPLLVLTGAKMPWAPDARVEGELLRERALLLGVPEESVRVTGRVGNTAD EAREVRKLLAGIARPRVILVTSAFHMRRAAMLFRHAGLRVDEFPVDFRTSFYDRLTVIDFLPCADGLENSELAIREMIGW LYYLLVNGEW >Mature_250_residues MLIFHKVLPVFVLPLGLGIVVVVLGALFRRWWLVWSGVGLLWVLGMPVTGDWMMRMVEGVDRRVDVALLEPADAVVVLGG VTVQVPGVRYGEWGDAADRFEGGVEVFRGGKAPLLVLTGAKMPWAPDARVEGELLRERALLLGVPEESVRVTGRVGNTAD EAREVRKLLAGIARPRVILVTSAFHMRRAAMLFRHAGLRVDEFPVDFRTSFYDRLTVIDFLPCADGLENSELAIREMIGW LYYLLVNGEW
Specific function: Unknown
COG id: COG1434
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27834; Mature: 27834
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIFHKVLPVFVLPLGLGIVVVVLGALFRRWWLVWSGVGLLWVLGMPVTGDWMMRMVEGV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHCC DRRVDVALLEPADAVVVLGGVTVQVPGVRYGEWGDAADRFEGGVEVFRGGKAPLLVLTGA CCCEEEEEECCCCEEEEECCEEEEECCCCCCCCCCHHHHHCCCHHHHCCCCCCEEEEECC KMPWAPDARVEGELLRERALLLGVPEESVRVTGRVGNTADEAREVRKLLAGIARPRVILV CCCCCCCCCCCHHHHHHHHHHEECCCHHEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEE TSAFHMRRAAMLFRHAGLRVDEFPVDFRTSFYDRLTVIDFLPCADGLENSELAIREMIGW ECHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH LYYLLVNGEW HHHHEECCCC >Mature Secondary Structure MLIFHKVLPVFVLPLGLGIVVVVLGALFRRWWLVWSGVGLLWVLGMPVTGDWMMRMVEGV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHCC DRRVDVALLEPADAVVVLGGVTVQVPGVRYGEWGDAADRFEGGVEVFRGGKAPLLVLTGA CCCEEEEEECCCCEEEEECCEEEEECCCCCCCCCCHHHHHCCCHHHHCCCCCCEEEEECC KMPWAPDARVEGELLRERALLLGVPEESVRVTGRVGNTADEAREVRKLLAGIARPRVILV CCCCCCCCCCCHHHHHHHHHHEECCCHHEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEE TSAFHMRRAAMLFRHAGLRVDEFPVDFRTSFYDRLTVIDFLPCADGLENSELAIREMIGW ECHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH LYYLLVNGEW HHHHEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA