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The map label for this gene is arnC [H]

Identifier: 194334508

GI number: 194334508

Start: 1858778

End: 1859773

Strand: Reverse

Name: arnC [H]

Synonym: Paes_1703

Alternate gene names: 194334508

Gene position: 1859773-1858778 (Counterclockwise)

Preceding gene: 194334510

Following gene: 194334505

Centisome position: 74.01

GC content: 50.1

Gene sequence:

>996_bases
ATGCCGCCAACTACCGGTCTGACGATTATTGTTCCGTTCTATAATGAGGAGGAGTCGTTGCCCCTGCTTTTCGATCAGAT
CTATCGTGCTCTGGAGGAGAGGGAATTGCAGGCATTGCTTGGCCAGAGCCCGTTGTTTGAGCTTTTAATGATTGACGATG
GTTCCTCTGACGGTTCGGCAGATGTTGTCCGCCGTCAGGCTGCGGTGAGAGATGAGGTGAAGCTGATCTCCTTTCAGAAA
AATTTCGGCAAGACGGCAGCTCTTGCTGCAGGGTTCAGGTATGCGACGGGGGAGTATGTGGTGACGATGGATGCTGATCT
GCAGGATGATCCTTTCGCTATCAGGGAGCTTATCATGAAATTGCAGGATGGATATGATCTGGTAAGCGGATGGAAGCGGG
AGCGTCGGGACCCTTTGTCGAAAACTATTCCGTCGTGGTTGTTCAATACGACGACGCGACTTTTTACCGGTATTGCGCTG
CATGATTTCAATTGCGGCTTGAAGGCCTACCGGAGGGGGGTGGTCAAATCGCTTGAACTTCACGGGGAGATGCATCGCTA
TATTCCTGTCCTGGCAAGCTGGAACGGTTACCGTGTGACGGAAATCCCTGTCAGACACCATTCCCGTAAGCACGGTCTGA
CCAAGTTTGGGGCGTCCAGGATGTTTCCGGGCTTGTTTGATTTTTTTACGGTCTTGTTCATTACTCGTTATCTGCGCCAG
CCGATGCATTTTTTCGGCATGCTGAGCCTGTTGAGCTTTGTTGTTGGTTTCGGGATCAGTTGCTATGTGACGGTCGAAAA
GATCTTTTTTGATCAGGCTGCTGGAAACCGGCCGATCCTCTTTCTTGGTATTCTGCTTATTATTCTTGCGGTGCAGTTTT
TCGCTATAGGCCTGTTGGGGGAAATGCTCATCCGGGATACATCGAGAACGTCAGGGTATATGGTGAAGGAGATGGTGAAT
GTTGAAGAGGGGGGAATAGTGAATAGTGATTGGTAA

Upstream 100 bases:

>100_bases
GCTCTTGTTGTGCCGTGACTGCTGTACGGGGCTTTTTTCCTTTTTGGGGCCTGATTGCGTACATTTTGTGACTGTTCATC
CTATCTACTAAAAAATTATT

Downstream 100 bases:

>100_bases
GGAATAATGGATTTCAGTCCACGAATTTGCACGAATTAACACGAATTGAGGAAAAAGATTTTTGCCCAAAGAAGGATGAA
GTGAATGGTGATTGGTGATT

Product: family 2 glycosyl transferase

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 331; Mature: 330

Protein sequence:

>331_residues
MPPTTGLTIIVPFYNEEESLPLLFDQIYRALEERELQALLGQSPLFELLMIDDGSSDGSADVVRRQAAVRDEVKLISFQK
NFGKTAALAAGFRYATGEYVVTMDADLQDDPFAIRELIMKLQDGYDLVSGWKRERRDPLSKTIPSWLFNTTTRLFTGIAL
HDFNCGLKAYRRGVVKSLELHGEMHRYIPVLASWNGYRVTEIPVRHHSRKHGLTKFGASRMFPGLFDFFTVLFITRYLRQ
PMHFFGMLSLLSFVVGFGISCYVTVEKIFFDQAAGNRPILFLGILLIILAVQFFAIGLLGEMLIRDTSRTSGYMVKEMVN
VEEGGIVNSDW

Sequences:

>Translated_331_residues
MPPTTGLTIIVPFYNEEESLPLLFDQIYRALEERELQALLGQSPLFELLMIDDGSSDGSADVVRRQAAVRDEVKLISFQK
NFGKTAALAAGFRYATGEYVVTMDADLQDDPFAIRELIMKLQDGYDLVSGWKRERRDPLSKTIPSWLFNTTTRLFTGIAL
HDFNCGLKAYRRGVVKSLELHGEMHRYIPVLASWNGYRVTEIPVRHHSRKHGLTKFGASRMFPGLFDFFTVLFITRYLRQ
PMHFFGMLSLLSFVVGFGISCYVTVEKIFFDQAAGNRPILFLGILLIILAVQFFAIGLLGEMLIRDTSRTSGYMVKEMVN
VEEGGIVNSDW
>Mature_330_residues
PPTTGLTIIVPFYNEEESLPLLFDQIYRALEERELQALLGQSPLFELLMIDDGSSDGSADVVRRQAAVRDEVKLISFQKN
FGKTAALAAGFRYATGEYVVTMDADLQDDPFAIRELIMKLQDGYDLVSGWKRERRDPLSKTIPSWLFNTTTRLFTGIALH
DFNCGLKAYRRGVVKSLELHGEMHRYIPVLASWNGYRVTEIPVRHHSRKHGLTKFGASRMFPGLFDFFTVLFITRYLRQP
MHFFGMLSLLSFVVGFGISCYVTVEKIFFDQAAGNRPILFLGILLIILAVQFFAIGLLGEMLIRDTSRTSGYMVKEMVNV
EEGGIVNSDW

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=247, Percent_Identity=27.5303643724696, Blast_Score=90, Evalue=3e-18,
Organism=Homo sapiens, GI7019323, Length=108, Percent_Identity=36.1111111111111, Blast_Score=70, Evalue=3e-12,
Organism=Escherichia coli, GI1788588, Length=322, Percent_Identity=32.2981366459627, Blast_Score=176, Evalue=2e-45,
Organism=Escherichia coli, GI1788692, Length=317, Percent_Identity=26.4984227129338, Blast_Score=117, Evalue=8e-28,
Organism=Caenorhabditis elegans, GI71999402, Length=241, Percent_Identity=27.3858921161826, Blast_Score=75, Evalue=5e-14,
Organism=Drosophila melanogaster, GI24585265, Length=234, Percent_Identity=26.4957264957265, Blast_Score=82, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 37578; Mature: 37447

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: PS00850 GLY_RADICAL_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPTTGLTIIVPFYNEEESLPLLFDQIYRALEERELQALLGQSPLFELLMIDDGSSDGSA
CCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHH
DVVRRQAAVRDEVKLISFQKNFGKTAALAAGFRYATGEYVVTMDADLQDDPFAIRELIMK
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCEEECCCEEEEEECCCCCCCHHHHHHHHH
LQDGYDLVSGWKRERRDPLSKTIPSWLFNTTTRLFTGIALHDFNCGLKAYRRGVVKSLEL
HHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHH
HGEMHRYIPVLASWNGYRVTEIPVRHHSRKHGLTKFGASRMFPGLFDFFTVLFITRYLRQ
HHHHHHHHHHHCCCCCEEEEEECHHHCHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH
PMHFFGMLSLLSFVVGFGISCYVTVEKIFFDQAAGNRPILFLGILLIILAVQFFAIGLLG
HHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
EMLIRDTSRTSGYMVKEMVNVEEGGIVNSDW
HHHHHCCCCCCCHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
PPTTGLTIIVPFYNEEESLPLLFDQIYRALEERELQALLGQSPLFELLMIDDGSSDGSA
CCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHH
DVVRRQAAVRDEVKLISFQKNFGKTAALAAGFRYATGEYVVTMDADLQDDPFAIRELIMK
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCEEECCCEEEEEECCCCCCCHHHHHHHHH
LQDGYDLVSGWKRERRDPLSKTIPSWLFNTTTRLFTGIALHDFNCGLKAYRRGVVKSLEL
HHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHH
HGEMHRYIPVLASWNGYRVTEIPVRHHSRKHGLTKFGASRMFPGLFDFFTVLFITRYLRQ
HHHHHHHHHHHCCCCCEEEEEECHHHCHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH
PMHFFGMLSLLSFVVGFGISCYVTVEKIFFDQAAGNRPILFLGILLIILAVQFFAIGLLG
HHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
EMLIRDTSRTSGYMVKEMVNVEEGGIVNSDW
HHHHHCCCCCCCHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA