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The map label for this gene is 194334489

Identifier: 194334489

GI number: 194334489

Start: 1836466

End: 1837911

Strand: Reverse

Name: 194334489

Synonym: Paes_1684

Alternate gene names: NA

Gene position: 1837911-1836466 (Counterclockwise)

Preceding gene: 194334492

Following gene: 194334488

Centisome position: 73.14

GC content: 47.37

Gene sequence:

>1446_bases
ATGTTTCCACTTGTTTATGAAATCAATACGAGAGTGTGGCTTCGTCACCTTTCGGAACAGTATCAGCGGCCTATTACGCT
TGGCAATATTCCTGACAGCGAGTTCAGGTTTTTCAAACACTCGGGTTTTGATTTCATCTGGTTGATGGGGATATGGCGGC
CGAGTAGGTACAGCGAGGCGATTGCCCGTTCGCATCGCGGACTTCGTTCTGTTTTTCTGGAACAGATTGACCATCCTGAT
CCATGCGATATTGTTGCTTCTCCGTATTCTATCCCTGAATACCGGATCAATCCCCTGCTTGGCGATGAGTCGGAGCTGGC
AGAGTTGCGAAAGCGTCTGGCAGCGGATGATATTCGGCTGATGCTTGATTTTGTGCCCAATCACATGGCCCTTGACAACA
AGTGGTTGCCGGACCATCCTGAATTTTTCGTTACGGTTTCGTCTGAGGAGCAGTGCATCGATCCTGAATCCTGTTTCGAG
TATCGTCATAACCATTTTCTTGCTCACGGCAAAGATCCGTATTTCCCTTCATGGACCGATACGCTCCAGCTTAATTACTC
GCATTTTGCCACTCACAACATGATGACTGAAAACCTCATGACGATCGCTCAACAGTGCGACGCTGTTCGTTGTGATGTGG
CAATGCTCGAGCTCAAATCGGTTTATGATACAACGTGGGGGTCGCTGAGCGGACCTATGCCGGAGGAGTTCTGGGGCAAA
GCCATCAGTGCGGTTAAACAGTTGTTTCCTGATTTTATTTTTCTTGCCGAATCATATTGGGACAAGGAGTGGGAACTGCA
GCAGCAGGGGTTTGATTTTACCTATGATAAACCGTTTTACGATTATATGACCGCTCATCCGGTTGCGATAACCAGATTGA
AAGGGCATCTGGAGGCTGAATGGAATTATCAGTCACATCTGTGCCGTTTTCTTGAGAACCATGATGAGGCGCGGGCGGCA
ACAAAACTTGGTCCCAACCATCTGCCGGCAGCTCTCGTTCTCATGACGGTTCCAGGGATGCATCTTATTCATCAGGGGCA
GCTCGAAGGCTACAGACTGCAGCTTCCGGTCCAGCTTCTCCGCCAGGCAAGCGAACCGTTTAACAGCGAACTCCCTGAGG
TCTATCATGAGATATTTATGTTGTCGAAACATGATGTGTTTCGGAAGGGAGACATCGAACATTTGGATATCAATGTCCAT
GAAACAAGTAACTGTATAGGTTTTCGGAGATTTTCAGGGCAACAATCTGCTTTTGTGCTTGCAAACTTTACGTCTACCGG
GATCGATATCAGCTTTTCTCATAATCATTTCACCTCCGATACGTCTTTAGTCTTCAAGGTATTCAGTACTCAACATCAGC
AAAAAAATATTGATTTTGTTGCTGATGAGCATCGGGTCAGAGTGAAGCTTTCACCCCACGAGGGTCTTGTTCTTGAATGC
GGGTAG

Upstream 100 bases:

>100_bases
AAATTCCTTTCCTGTTACCGCGTTTGATGGGGATGAATAGTATATTGCCTGCTCGGCGTTGCCGACATCGTTAACGAACT
TCAAATCCATTATTTTTCAG

Downstream 100 bases:

>100_bases
GCGGCATGAACCTGAACTGCGTTGCCTTTGTCCGGCTGTCGGGGGGCGATATTTTTTCACCTTTTAATGTATTGCGGCAT
GAAAAAATGTACTGATGAAG

Product: alpha amylase catalytic subunit

Products: NA

Alternate protein names: Alpha Amylase; Alpha-Amylase Family Protein; Alpha Amylase Domain-Containing Protein; Alpha-Amylase; Alpha Amylase Catalytic Subunit; Alpha Amylase Catalytic Domain-Containing Protein; Alpha Amylase Family Protein; Glycosidase; Alpha Amylase Domain Protein; Alpha Amylase Catalytic Domain Subfamily; Glycoside Hydrolase

Number of amino acids: Translated: 481; Mature: 481

Protein sequence:

>481_residues
MFPLVYEINTRVWLRHLSEQYQRPITLGNIPDSEFRFFKHSGFDFIWLMGIWRPSRYSEAIARSHRGLRSVFLEQIDHPD
PCDIVASPYSIPEYRINPLLGDESELAELRKRLAADDIRLMLDFVPNHMALDNKWLPDHPEFFVTVSSEEQCIDPESCFE
YRHNHFLAHGKDPYFPSWTDTLQLNYSHFATHNMMTENLMTIAQQCDAVRCDVAMLELKSVYDTTWGSLSGPMPEEFWGK
AISAVKQLFPDFIFLAESYWDKEWELQQQGFDFTYDKPFYDYMTAHPVAITRLKGHLEAEWNYQSHLCRFLENHDEARAA
TKLGPNHLPAALVLMTVPGMHLIHQGQLEGYRLQLPVQLLRQASEPFNSELPEVYHEIFMLSKHDVFRKGDIEHLDINVH
ETSNCIGFRRFSGQQSAFVLANFTSTGIDISFSHNHFTSDTSLVFKVFSTQHQQKNIDFVADEHRVRVKLSPHEGLVLEC
G

Sequences:

>Translated_481_residues
MFPLVYEINTRVWLRHLSEQYQRPITLGNIPDSEFRFFKHSGFDFIWLMGIWRPSRYSEAIARSHRGLRSVFLEQIDHPD
PCDIVASPYSIPEYRINPLLGDESELAELRKRLAADDIRLMLDFVPNHMALDNKWLPDHPEFFVTVSSEEQCIDPESCFE
YRHNHFLAHGKDPYFPSWTDTLQLNYSHFATHNMMTENLMTIAQQCDAVRCDVAMLELKSVYDTTWGSLSGPMPEEFWGK
AISAVKQLFPDFIFLAESYWDKEWELQQQGFDFTYDKPFYDYMTAHPVAITRLKGHLEAEWNYQSHLCRFLENHDEARAA
TKLGPNHLPAALVLMTVPGMHLIHQGQLEGYRLQLPVQLLRQASEPFNSELPEVYHEIFMLSKHDVFRKGDIEHLDINVH
ETSNCIGFRRFSGQQSAFVLANFTSTGIDISFSHNHFTSDTSLVFKVFSTQHQQKNIDFVADEHRVRVKLSPHEGLVLEC
G
>Mature_481_residues
MFPLVYEINTRVWLRHLSEQYQRPITLGNIPDSEFRFFKHSGFDFIWLMGIWRPSRYSEAIARSHRGLRSVFLEQIDHPD
PCDIVASPYSIPEYRINPLLGDESELAELRKRLAADDIRLMLDFVPNHMALDNKWLPDHPEFFVTVSSEEQCIDPESCFE
YRHNHFLAHGKDPYFPSWTDTLQLNYSHFATHNMMTENLMTIAQQCDAVRCDVAMLELKSVYDTTWGSLSGPMPEEFWGK
AISAVKQLFPDFIFLAESYWDKEWELQQQGFDFTYDKPFYDYMTAHPVAITRLKGHLEAEWNYQSHLCRFLENHDEARAA
TKLGPNHLPAALVLMTVPGMHLIHQGQLEGYRLQLPVQLLRQASEPFNSELPEVYHEIFMLSKHDVFRKGDIEHLDINVH
ETSNCIGFRRFSGQQSAFVLANFTSTGIDISFSHNHFTSDTSLVFKVFSTQHQQKNIDFVADEHRVRVKLSPHEGLVLEC
G

Specific function: Unknown

COG id: COG0366

COG function: function code G; Glycosidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55978; Mature: 55978

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFPLVYEINTRVWLRHLSEQYQRPITLGNIPDSEFRFFKHSGFDFIWLMGIWRPSRYSEA
CCCEEEECCHHHHHHHHHHHHHCCEEECCCCCHHHHHHHCCCCCEEEEEECCCCCHHHHH
IARSHRGLRSVFLEQIDHPDPCDIVASPYSIPEYRINPLLGDESELAELRKRLAADDIRL
HHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHH
MLDFVPNHMALDNKWLPDHPEFFVTVSSEEQCIDPESCFEYRHNHFLAHGKDPYFPSWTD
HHHHCCCCEECCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCEEEECCCCCCCCCCCC
TLQLNYSHFATHNMMTENLMTIAQQCDAVRCDVAMLELKSVYDTTWGSLSGPMPEEFWGK
EEEECHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
AISAVKQLFPDFIFLAESYWDKEWELQQQGFDFTYDKPFYDYMTAHPVAITRLKGHLEAE
HHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHCCCEEEEEECCCEEEC
WNYQSHLCRFLENHDEARAATKLGPNHLPAALVLMTVPGMHLIHQGQLEGYRLQLPVQLL
CCHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHCCCHHEEECCCCCCEEEECCHHHH
RQASEPFNSELPEVYHEIFMLSKHDVFRKGDIEHLDINVHETSNCIGFRRFSGQQSAFVL
HHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCEEEEECCCCCCEEEE
ANFTSTGIDISFSHNHFTSDTSLVFKVFSTQHQQKNIDFVADEHRVRVKLSPHEGLVLEC
EEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCEEEEEECCCCCEEEEC
G
C
>Mature Secondary Structure
MFPLVYEINTRVWLRHLSEQYQRPITLGNIPDSEFRFFKHSGFDFIWLMGIWRPSRYSEA
CCCEEEECCHHHHHHHHHHHHHCCEEECCCCCHHHHHHHCCCCCEEEEEECCCCCHHHHH
IARSHRGLRSVFLEQIDHPDPCDIVASPYSIPEYRINPLLGDESELAELRKRLAADDIRL
HHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHH
MLDFVPNHMALDNKWLPDHPEFFVTVSSEEQCIDPESCFEYRHNHFLAHGKDPYFPSWTD
HHHHCCCCEECCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCEEEECCCCCCCCCCCC
TLQLNYSHFATHNMMTENLMTIAQQCDAVRCDVAMLELKSVYDTTWGSLSGPMPEEFWGK
EEEECHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
AISAVKQLFPDFIFLAESYWDKEWELQQQGFDFTYDKPFYDYMTAHPVAITRLKGHLEAE
HHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHCCCEEEEEECCCEEEC
WNYQSHLCRFLENHDEARAATKLGPNHLPAALVLMTVPGMHLIHQGQLEGYRLQLPVQLL
CCHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHCCCHHEEECCCCCCEEEECCHHHH
RQASEPFNSELPEVYHEIFMLSKHDVFRKGDIEHLDINVHETSNCIGFRRFSGQQSAFVL
HHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCEEEEECCCCCCEEEE
ANFTSTGIDISFSHNHFTSDTSLVFKVFSTQHQQKNIDFVADEHRVRVKLSPHEGLVLEC
EEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCEEEEEECCCCCEEEEC
G
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA