Click here to switch to the map view.

The map label for this gene is korB [H]

Identifier: 194334261

GI number: 194334261

Start: 1588687

End: 1589559

Strand: Reverse

Name: korB [H]

Synonym: Paes_1454

Alternate gene names: 194334261

Gene position: 1589559-1588687 (Counterclockwise)

Preceding gene: 194334262

Following gene: 194334259

Centisome position: 63.26

GC content: 54.52

Gene sequence:

>873_bases
ATGACAGATTACAACGAAACCAGGCTGATGAACCCATTCGACATTCCCGGCAAAAAAATGGGCTGGTGCCCCGGATGCGG
CAACTACAAGATTCTCGAAACGCTCAAAGAGGCTCTTCATGAGCTCGGTATCGACAGGCGAAACCTCGTGATCGTCTCCG
GTATAGGCCAGGCAGCAAAGACGCCGCAGTATGTCGATACCAACATGTTCAACGGTCTGCACGGACGAGCCCTTCCCGCA
GCTCTCGGCATCAAGCTTTCCAATCGCAATCTGGTCGTGATCGCCGAATCAGGCGACGGGTGTATGTATGGAGAGGGCGG
CAACCATTTTCTGCATGCCATACGGCGCAATATCGATATCACCGTGCTCGTTCACGACAATATGATCTACGGCCTCACCA
AAGGTCAGGCATCGCCGACATCGAGGATGGGAATGACAACCCCGGTGCAGGTCAATGGCGTGATGCTCGAACCCTTCAAT
CCTCTTGCTGTTTCGCTTGCGCTCGATGCACCTTTTGTCGCCAGGGCAAGCGCCGGCGACGGAGCGCAGACAAAAGAGAT
CATCAAACAGGCGATCTCCTTCCGCGGACTGTCGGTGGTCGATATCTTTCAGCCCTGCGTCGTGTTCAACAAGCTGAACA
CCTACCAGTGGTTCAAAGAAAACACCTACTATCTCCCCGACGATTACGATCCGACCGATCGTCAGCAGGCATTCGCCAAA
TCCATCGAAACCGAAAAGCTTCCCCTCGGGGTTCTTTACTGTCACGAAGGCCGAAAAGTCTACGAAGACCTCCTCGGCAT
CACCCGAACCCCCGCATACCAGCGCACCGTTTCCGACGAAGCGTTTGAAAAGATGCTTGCGGCGTACCGGTAA

Upstream 100 bases:

>100_bases
TCCAACGCGAACTCGGCATTACTGCAGACCGGCGTATCGGAAAGGTGAGCGGTGAGCCGTTTGCTGTTGAAGAGGTTGTT
CAGATGTTGAAGGAGGAGCT

Downstream 100 bases:

>100_bases
CCATAAGGCATGTTGCTGTCATGCGAAACACGACCGACGCCCCGGGCAACCACAGGGGGGTTGCCCCTACGGTGTATGCG
TGGGATTTTGGGTGTAATCG

Product: pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta

Products: NA

Alternate protein names: 2-ketoglutarate oxidoreductase beta chain; KOR; 2-oxoglutarate-ferredoxin oxidoreductase subunit beta [H]

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MTDYNETRLMNPFDIPGKKMGWCPGCGNYKILETLKEALHELGIDRRNLVIVSGIGQAAKTPQYVDTNMFNGLHGRALPA
ALGIKLSNRNLVVIAESGDGCMYGEGGNHFLHAIRRNIDITVLVHDNMIYGLTKGQASPTSRMGMTTPVQVNGVMLEPFN
PLAVSLALDAPFVARASAGDGAQTKEIIKQAISFRGLSVVDIFQPCVVFNKLNTYQWFKENTYYLPDDYDPTDRQQAFAK
SIETEKLPLGVLYCHEGRKVYEDLLGITRTPAYQRTVSDEAFEKMLAAYR

Sequences:

>Translated_290_residues
MTDYNETRLMNPFDIPGKKMGWCPGCGNYKILETLKEALHELGIDRRNLVIVSGIGQAAKTPQYVDTNMFNGLHGRALPA
ALGIKLSNRNLVVIAESGDGCMYGEGGNHFLHAIRRNIDITVLVHDNMIYGLTKGQASPTSRMGMTTPVQVNGVMLEPFN
PLAVSLALDAPFVARASAGDGAQTKEIIKQAISFRGLSVVDIFQPCVVFNKLNTYQWFKENTYYLPDDYDPTDRQQAFAK
SIETEKLPLGVLYCHEGRKVYEDLLGITRTPAYQRTVSDEAFEKMLAAYR
>Mature_289_residues
TDYNETRLMNPFDIPGKKMGWCPGCGNYKILETLKEALHELGIDRRNLVIVSGIGQAAKTPQYVDTNMFNGLHGRALPAA
LGIKLSNRNLVVIAESGDGCMYGEGGNHFLHAIRRNIDITVLVHDNMIYGLTKGQASPTSRMGMTTPVQVNGVMLEPFNP
LAVSLALDAPFVARASAGDGAQTKEIIKQAISFRGLSVVDIFQPCVVFNKLNTYQWFKENTYYLPDDYDPTDRQQAFAKS
IETEKLPLGVLYCHEGRKVYEDLLGITRTPAYQRTVSDEAFEKMLAAYR

Specific function: Unknown

COG id: COG1013

COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011766 [H]

Pfam domain/function: PF02775 TPP_enzyme_C [H]

EC number: =1.2.7.3 [H]

Molecular weight: Translated: 32218; Mature: 32087

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: PS00018 EF_HAND_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDYNETRLMNPFDIPGKKMGWCPGCGNYKILETLKEALHELGIDRRNLVIVSGIGQAAK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCC
TPQYVDTNMFNGLHGRALPAALGIKLSNRNLVVIAESGDGCMYGEGGNHFLHAIRRNIDI
CCCCCCHHHCCCCCCCCCCHHHEEEECCCEEEEEEECCCCEEECCCCHHHHHHHHCCCCE
TVLVHDNMIYGLTKGQASPTSRMGMTTPVQVNGVMLEPFNPLAVSLALDAPFVARASAGD
EEEEECCEEEEEECCCCCCCHHCCCCCCEEECCEEECCCCCEEEEEEECCCEEEECCCCC
GAQTKEIIKQAISFRGLSVVDIFQPCVVFNKLNTYQWFKENTYYLPDDYDPTDRQQAFAK
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHCCCEECCCCCCCCHHHHHHHH
SIETEKLPLGVLYCHEGRKVYEDLLGITRTPAYQRTVSDEAFEKMLAAYR
HCCCCCCCEEEEEECCCHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHCC
>Mature Secondary Structure 
TDYNETRLMNPFDIPGKKMGWCPGCGNYKILETLKEALHELGIDRRNLVIVSGIGQAAK
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCC
TPQYVDTNMFNGLHGRALPAALGIKLSNRNLVVIAESGDGCMYGEGGNHFLHAIRRNIDI
CCCCCCHHHCCCCCCCCCCHHHEEEECCCEEEEEEECCCCEEECCCCHHHHHHHHCCCCE
TVLVHDNMIYGLTKGQASPTSRMGMTTPVQVNGVMLEPFNPLAVSLALDAPFVARASAGD
EEEEECCEEEEEECCCCCCCHHCCCCCCEEECCEEECCCCCEEEEEEECCCEEEECCCCC
GAQTKEIIKQAISFRGLSVVDIFQPCVVFNKLNTYQWFKENTYYLPDDYDPTDRQQAFAK
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHCCCEECCCCCCCCHHHHHHHH
SIETEKLPLGVLYCHEGRKVYEDLLGITRTPAYQRTVSDEAFEKMLAAYR
HCCCCCCCEEEEEECCCHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]