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The map label for this gene is yfmR [H]

Identifier: 194334254

GI number: 194334254

Start: 1579677

End: 1581575

Strand: Reverse

Name: yfmR [H]

Synonym: Paes_1447

Alternate gene names: 194334254

Gene position: 1581575-1579677 (Counterclockwise)

Preceding gene: 194334256

Following gene: 194334253

Centisome position: 62.94

GC content: 54.82

Gene sequence:

>1899_bases
ATGGTTCTTTTAACGGTTGAAGCTATCAGCAAGCAGTACGGGTTAAAAACCCTTTTTAATGATGTATCGTTCGGTATCGA
TGAGAAAGACAAGATTGGTCTTATCGGGGCTAACGGCAGCGGAAAGAGCACGCTGTTAAAGATCATCGCAGGGGCGGAGA
CGCCTGATTCGGGCAAGGTGATGGCAACGAAGCAGAAGCGGATTGCCTGGCTCCCGCAGGATTCTCCCTACAATCCGGAC
GATACGGTGCTTGAAGCGGTGCTTACGTCGGGTGACCCGGTGCTGAGCCTGGTTTATCAGTATGAGGTGGCCTGTAAAGA
GCTTGAAAGAACAGGCGGGATGGACGACAAGGTGATCGACAGGGTGAGCAATCTGTCGCATGAGCTTGACGTGAACCGGG
CATGGGAACTTGAGGCGACCGTCAAATCGGTACTGGGGAAGCTGGGTCTCAATGACGAGACGGCAAAGATGGGAACCCTG
TCGGGTGGGCAGCGCAAACGCGTTGCTCTGGCTCATGCGCTGGTGATGCCGAGCGACGCGCTGATTCTCGATGAACCGAC
AAACCATCTCGATGCCGATAGCGTGGAGTGGCTCGAGAAGTACCTGAGCCGCTACCAGGGCGCGGTGATTCTGGTGACGC
ACGACCGGTATTTTCTTGATCGTGTTGCCAACCGCATGATTGAACTTGACGGGCAAACAGCCAATACCTATACCGGCGGC
TACACGAGCTACCTCCAGCAGAAGGCCGAAAAAGAGGAGCAGGATGCCAGAGCGGATCGCAAAAAACAGGCGCTTGTCCG
CCAGGAGCTTGAGTGGATGCGTTCGGGATGCAAGGCCCGCACGACCAAGCAGAAAGCCCGTATTCAGCGCGCTGAGGGGC
TTATCAACGAGCGGGGAAGAGGGGAGCAGCAGGAGTTGAAAACGGATTTCGGGGCCGATCGACTTGGCAACAAGATTATC
GAACTGCACAATGTTTCGAAGTCGTGGGACGGGACGCCTCTCATCAACTCATTTGAATATTTTGTGCAGAAGGGTGACCG
TATCGGTATTATCGGTCCGAACGGCTCGGGGAAAACCACGCTGCTTGATCTGATAACCGGCAGGATAGAGCCGGACAGCG
GCCATATCGATATAGGCAAGACGGTAAAAATCGGCTATTACGACCAGATGAGCCGTGGCCTTGATGACTCCAAGCGGGTG
ATCGATTATATCAAGGAGGAGGCCGAGCAGGTCAAGCTCAAGGATGGGACCGAACTTTCGGCTTCCAAAATGCTTGAGCG
TTTTCTTTTTGAGCCCTCTGTGCAGTATAACCTGATCGGCAACCTTTCGGGCGGTGAACGCCGCAGGCTCTATCTTCTGA
AGCAGCTCATCGTGTCGCCTAATGTGCTGCTGCTTGATGAGCCGACCAACGATCTCGATATTCCGACCCTTCAGGTCCTC
GAGGATTTTCTTGACTCATGGCCGGGATGCGTCATCGCGGTCAGCCACGATCGCTATTTCCTTGACAGGGTTGTCGATCA
TGTGTTTGTCTTTGAGGACAACGGCCATATCCGCGAGTATCCCGGCAACTACAGCGTTTATCTTGAACTGAAGGCTCAGG
GGGGCGCCAGCGCAGAGAAGCCGCAGAAAAAAGAGCGGTCGGCAGCCAAGCCCTCTGAAGCGCGAAAAAAAAGCCCCAGC
GCACAGCCTAAGCTGGGGTATAAAGAGGCGCGTGAACTCTCGGCTCTGGAGAAGAAGATCGCTCAGACTGAAAAGCGGCA
GGAGGCTGTTGCTGCAGCGCTCAATGCGGCTGGATCGGATTTCGGGAAGGTGCAGGAGCTTTCGGAGGAACTCCAGAACC
TTCAGGCGGAACTCAATGCTGATATGACCCGTTGGGCTGAACTTGCTGACAGGGCGTAG

Upstream 100 bases:

>100_bases
CTGGAGCCTGCGGAAGGGTTTTTCCTCTCTTTGTGAACGTTGTGCAATGTCTATATTCCAGCACATAAATTTTTCATCAG
CTTATTGTCTGTCACGTCCT

Downstream 100 bases:

>100_bases
ACGCGGTTGATGGGGTGGGGGAGTGAGACTATTTTTCTATATTTATTCCTGTAGATCAACCCCAAACCAAGAGGAGGCAA
CTATGTCGATGGAGCAGGCA

Product: ABC transporter-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 632; Mature: 632

Protein sequence:

>632_residues
MVLLTVEAISKQYGLKTLFNDVSFGIDEKDKIGLIGANGSGKSTLLKIIAGAETPDSGKVMATKQKRIAWLPQDSPYNPD
DTVLEAVLTSGDPVLSLVYQYEVACKELERTGGMDDKVIDRVSNLSHELDVNRAWELEATVKSVLGKLGLNDETAKMGTL
SGGQRKRVALAHALVMPSDALILDEPTNHLDADSVEWLEKYLSRYQGAVILVTHDRYFLDRVANRMIELDGQTANTYTGG
YTSYLQQKAEKEEQDARADRKKQALVRQELEWMRSGCKARTTKQKARIQRAEGLINERGRGEQQELKTDFGADRLGNKII
ELHNVSKSWDGTPLINSFEYFVQKGDRIGIIGPNGSGKTTLLDLITGRIEPDSGHIDIGKTVKIGYYDQMSRGLDDSKRV
IDYIKEEAEQVKLKDGTELSASKMLERFLFEPSVQYNLIGNLSGGERRRLYLLKQLIVSPNVLLLDEPTNDLDIPTLQVL
EDFLDSWPGCVIAVSHDRYFLDRVVDHVFVFEDNGHIREYPGNYSVYLELKAQGGASAEKPQKKERSAAKPSEARKKSPS
AQPKLGYKEARELSALEKKIAQTEKRQEAVAAALNAAGSDFGKVQELSEELQNLQAELNADMTRWAELADRA

Sequences:

>Translated_632_residues
MVLLTVEAISKQYGLKTLFNDVSFGIDEKDKIGLIGANGSGKSTLLKIIAGAETPDSGKVMATKQKRIAWLPQDSPYNPD
DTVLEAVLTSGDPVLSLVYQYEVACKELERTGGMDDKVIDRVSNLSHELDVNRAWELEATVKSVLGKLGLNDETAKMGTL
SGGQRKRVALAHALVMPSDALILDEPTNHLDADSVEWLEKYLSRYQGAVILVTHDRYFLDRVANRMIELDGQTANTYTGG
YTSYLQQKAEKEEQDARADRKKQALVRQELEWMRSGCKARTTKQKARIQRAEGLINERGRGEQQELKTDFGADRLGNKII
ELHNVSKSWDGTPLINSFEYFVQKGDRIGIIGPNGSGKTTLLDLITGRIEPDSGHIDIGKTVKIGYYDQMSRGLDDSKRV
IDYIKEEAEQVKLKDGTELSASKMLERFLFEPSVQYNLIGNLSGGERRRLYLLKQLIVSPNVLLLDEPTNDLDIPTLQVL
EDFLDSWPGCVIAVSHDRYFLDRVVDHVFVFEDNGHIREYPGNYSVYLELKAQGGASAEKPQKKERSAAKPSEARKKSPS
AQPKLGYKEARELSALEKKIAQTEKRQEAVAAALNAAGSDFGKVQELSEELQNLQAELNADMTRWAELADRA
>Mature_632_residues
MVLLTVEAISKQYGLKTLFNDVSFGIDEKDKIGLIGANGSGKSTLLKIIAGAETPDSGKVMATKQKRIAWLPQDSPYNPD
DTVLEAVLTSGDPVLSLVYQYEVACKELERTGGMDDKVIDRVSNLSHELDVNRAWELEATVKSVLGKLGLNDETAKMGTL
SGGQRKRVALAHALVMPSDALILDEPTNHLDADSVEWLEKYLSRYQGAVILVTHDRYFLDRVANRMIELDGQTANTYTGG
YTSYLQQKAEKEEQDARADRKKQALVRQELEWMRSGCKARTTKQKARIQRAEGLINERGRGEQQELKTDFGADRLGNKII
ELHNVSKSWDGTPLINSFEYFVQKGDRIGIIGPNGSGKTTLLDLITGRIEPDSGHIDIGKTVKIGYYDQMSRGLDDSKRV
IDYIKEEAEQVKLKDGTELSASKMLERFLFEPSVQYNLIGNLSGGERRRLYLLKQLIVSPNVLLLDEPTNDLDIPTLQVL
EDFLDSWPGCVIAVSHDRYFLDRVVDHVFVFEDNGHIREYPGNYSVYLELKAQGGASAEKPQKKERSAAKPSEARKKSPS
AQPKLGYKEARELSALEKKIAQTEKRQEAVAAALNAAGSDFGKVQELSEELQNLQAELNADMTRWAELADRA

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI10947135, Length=555, Percent_Identity=31.3513513513514, Blast_Score=191, Evalue=2e-48,
Organism=Homo sapiens, GI69354671, Length=555, Percent_Identity=31.3513513513514, Blast_Score=191, Evalue=2e-48,
Organism=Homo sapiens, GI10947137, Length=555, Percent_Identity=30.0900900900901, Blast_Score=189, Evalue=7e-48,
Organism=Homo sapiens, GI27881506, Length=555, Percent_Identity=30.0900900900901, Blast_Score=188, Evalue=1e-47,
Organism=Homo sapiens, GI148612853, Length=525, Percent_Identity=28, Blast_Score=182, Evalue=9e-46,
Organism=Escherichia coli, GI2367384, Length=531, Percent_Identity=39.1713747645951, Blast_Score=373, Evalue=1e-104,
Organism=Escherichia coli, GI1787182, Length=653, Percent_Identity=33.0781010719755, Blast_Score=320, Evalue=3e-88,
Organism=Escherichia coli, GI1789751, Length=640, Percent_Identity=30.3125, Blast_Score=258, Evalue=6e-70,
Organism=Escherichia coli, GI1787041, Length=540, Percent_Identity=30, Blast_Score=234, Evalue=2e-62,
Organism=Escherichia coli, GI1788165, Length=210, Percent_Identity=30, Blast_Score=74, Evalue=4e-14,
Organism=Escherichia coli, GI1790467, Length=240, Percent_Identity=30, Blast_Score=72, Evalue=9e-14,
Organism=Escherichia coli, GI1788761, Length=210, Percent_Identity=30.4761904761905, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1787029, Length=240, Percent_Identity=30.8333333333333, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1789891, Length=208, Percent_Identity=25.4807692307692, Blast_Score=69, Evalue=9e-13,
Organism=Escherichia coli, GI1786398, Length=231, Percent_Identity=27.2727272727273, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1789593, Length=190, Percent_Identity=28.4210526315789, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI1786253, Length=176, Percent_Identity=30.1136363636364, Blast_Score=66, Evalue=6e-12,
Organism=Escherichia coli, GI1786698, Length=163, Percent_Identity=29.4478527607362, Blast_Score=65, Evalue=9e-12,
Organism=Escherichia coli, GI1786563, Length=192, Percent_Identity=28.125, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI87081782, Length=172, Percent_Identity=27.906976744186, Blast_Score=64, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=538, Percent_Identity=28.996282527881, Blast_Score=198, Evalue=6e-51,
Organism=Caenorhabditis elegans, GI17555318, Length=525, Percent_Identity=27.8095238095238, Blast_Score=183, Evalue=2e-46,
Organism=Caenorhabditis elegans, GI17553372, Length=552, Percent_Identity=29.7101449275362, Blast_Score=179, Evalue=5e-45,
Organism=Saccharomyces cerevisiae, GI6320874, Length=531, Percent_Identity=30.5084745762712, Blast_Score=218, Evalue=3e-57,
Organism=Saccharomyces cerevisiae, GI6321121, Length=545, Percent_Identity=27.7064220183486, Blast_Score=174, Evalue=5e-44,
Organism=Saccharomyces cerevisiae, GI6324314, Length=387, Percent_Identity=27.390180878553, Blast_Score=132, Evalue=1e-31,
Organism=Saccharomyces cerevisiae, GI6323278, Length=391, Percent_Identity=27.1099744245524, Blast_Score=130, Evalue=5e-31,
Organism=Saccharomyces cerevisiae, GI6325030, Length=386, Percent_Identity=25.9067357512953, Blast_Score=120, Evalue=7e-28,
Organism=Saccharomyces cerevisiae, GI6320266, Length=377, Percent_Identity=24.9336870026525, Blast_Score=88, Evalue=4e-18,
Organism=Drosophila melanogaster, GI24641342, Length=538, Percent_Identity=29.9256505576208, Blast_Score=199, Evalue=3e-51,
Organism=Drosophila melanogaster, GI24666836, Length=543, Percent_Identity=28.5451197053407, Blast_Score=184, Evalue=2e-46,
Organism=Drosophila melanogaster, GI24642252, Length=512, Percent_Identity=28.515625, Blast_Score=182, Evalue=5e-46,
Organism=Drosophila melanogaster, GI18859989, Length=512, Percent_Identity=28.515625, Blast_Score=182, Evalue=5e-46,
Organism=Drosophila melanogaster, GI221500365, Length=146, Percent_Identity=28.7671232876712, Blast_Score=67, Evalue=6e-11,
Organism=Drosophila melanogaster, GI116007184, Length=146, Percent_Identity=28.7671232876712, Blast_Score=66, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 70455; Mature: 70455

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLLTVEAISKQYGLKTLFNDVSFGIDEKDKIGLIGANGSGKSTLLKIIAGAETPDSGKV
CEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCE
MATKQKRIAWLPQDSPYNPDDTVLEAVLTSGDPVLSLVYQYEVACKELERTGGMDDKVID
EEECCCCEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH
RVSNLSHELDVNRAWELEATVKSVLGKLGLNDETAKMGTLSGGQRKRVALAHALVMPSDA
HHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCC
LILDEPTNHLDADSVEWLEKYLSRYQGAVILVTHDRYFLDRVANRMIELDGQTANTYTGG
EEECCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHEECCCCCCCCCCCH
YTSYLQQKAEKEEQDARADRKKQALVRQELEWMRSGCKARTTKQKARIQRAEGLINERGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCC
GEQQELKTDFGADRLGNKIIELHNVSKSWDGTPLINSFEYFVQKGDRIGIIGPNGSGKTT
CHHHHHHHHCCHHHHCCHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCHH
LLDLITGRIEPDSGHIDIGKTVKIGYYDQMSRGLDDSKRVIDYIKEEAEQVKLKDGTELS
HHHHHHCCCCCCCCCEECCCEEEECCHHHHHCCCCHHHHHHHHHHHHHHHEECCCCCCHH
ASKMLERFLFEPSVQYNLIGNLSGGERRRLYLLKQLIVSPNVLLLDEPTNDLDIPTLQVL
HHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHH
EDFLDSWPGCVIAVSHDRYFLDRVVDHVFVFEDNGHIREYPGNYSVYLELKAQGGASAEK
HHHHHCCCCEEEEEECCHHHHHHHHHEEEEECCCCCEEECCCCEEEEEEEEECCCCCCCC
PQKKERSAAKPSEARKKSPSAQPKLGYKEARELSALEKKIAQTEKRQEAVAAALNAAGSD
CCHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
FGKVQELSEELQNLQAELNADMTRWAELADRA
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC
>Mature Secondary Structure
MVLLTVEAISKQYGLKTLFNDVSFGIDEKDKIGLIGANGSGKSTLLKIIAGAETPDSGKV
CEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCE
MATKQKRIAWLPQDSPYNPDDTVLEAVLTSGDPVLSLVYQYEVACKELERTGGMDDKVID
EEECCCCEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH
RVSNLSHELDVNRAWELEATVKSVLGKLGLNDETAKMGTLSGGQRKRVALAHALVMPSDA
HHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCC
LILDEPTNHLDADSVEWLEKYLSRYQGAVILVTHDRYFLDRVANRMIELDGQTANTYTGG
EEECCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHEECCCCCCCCCCCH
YTSYLQQKAEKEEQDARADRKKQALVRQELEWMRSGCKARTTKQKARIQRAEGLINERGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCC
GEQQELKTDFGADRLGNKIIELHNVSKSWDGTPLINSFEYFVQKGDRIGIIGPNGSGKTT
CHHHHHHHHCCHHHHCCHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCHH
LLDLITGRIEPDSGHIDIGKTVKIGYYDQMSRGLDDSKRVIDYIKEEAEQVKLKDGTELS
HHHHHHCCCCCCCCCEECCCEEEECCHHHHHCCCCHHHHHHHHHHHHHHHEECCCCCCHH
ASKMLERFLFEPSVQYNLIGNLSGGERRRLYLLKQLIVSPNVLLLDEPTNDLDIPTLQVL
HHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHH
EDFLDSWPGCVIAVSHDRYFLDRVVDHVFVFEDNGHIREYPGNYSVYLELKAQGGASAEK
HHHHHCCCCEEEEEECCHHHHHHHHHEEEEECCCCCEEECCCCEEEEEEEEECCCCCCCC
PQKKERSAAKPSEARKKSPSAQPKLGYKEARELSALEKKIAQTEKRQEAVAAALNAAGSD
CCHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
FGKVQELSEELQNLQAELNADMTRWAELADRA
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141694; 9384377 [H]