| Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
|---|---|
| Accession | NC_011059 |
| Length | 2,512,923 |
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The map label for this gene is 194334241
Identifier: 194334241
GI number: 194334241
Start: 1560839
End: 1561459
Strand: Reverse
Name: 194334241
Synonym: Paes_1434
Alternate gene names: NA
Gene position: 1561459-1560839 (Counterclockwise)
Preceding gene: 194334243
Following gene: 194334240
Centisome position: 62.14
GC content: 55.56
Gene sequence:
>621_bases ATGGCGAACGGCTGTAAACAAAAAAAGCTCCCGAGGTTAATCGGAAGCTTTTCTTGCTGCGGAGAGAGAGGGATTGATTC GCTACGCTCACCCCCTTCGGGGGCAGACTCGCTTTGCTCGCTGTCCCGACTGACGTCGGTCGAACCCTCTTGTCGGGTTC GAACCCCTCTCCGCCTTATGGCGAACGGCTGTAAACAAAAAAAGCTCCCGGGGTTATTCGGAAGCTTTTTCTGTTGCGGA GAGAGAGGGATTGATTCGCTACGCTCACCCCCTTCGGGGGCAGACTCGCTTTGCTCGCTGTCCCGACTGACGTCGGTCGA ACCCTCTTGTCGGGTTCGAACCCCTCTCCGCCTTATGGCGAAGGGCTATAAACAGAAAAAGCTTCCGTGGTTATTCGGAA GCTTTTTCTGTTGCGGAGAGAGAGGGATTGATTCGCTACGCTCACCCCCTTCGGGGGCAGACTCGCTTTGCTCGCTGTCC CGACTGACGTCGGTCGAACCCTCTTGTCGGGTTCGAACCCCTCTCCGACTTATGGCGAAGGGCTATAAACAAAAAAAGCT CCCGGGGTTAGTCGGAAGCTTTTTCTTGCTGCGGAGAGAGAGGGATTCGAACCCTCGATAG
Upstream 100 bases:
>100_bases TTCGCTACGCTCACCCCCTTCGGGGGCAGACTCGCTTTGCTCGCTGTCCCGACTGACGTCGGTCGAACCCTCTTGTCGGT TTCGAACCCCTCTCCGACTT
Downstream 100 bases:
>100_bases CCCTTGTTAGAACTATGACGGTTTAGCAAACCGTTGCCTTCAGCCGCTCGGCCACCTCTCCTGAAAAAATATGTTTGTGC GGAGGATGAGGGACTCGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MANGCKQKKLPRLIGSFSCCGERGIDSLRSPPSGADSLCSLSRLTSVEPSCRVRTPLRLMANGCKQKKLPGLFGSFFCCG ERGIDSLRSPPSGADSLCSLSRLTSVEPSCRVRTPLRLMAKGYKQKKLPWLFGSFFCCGERGIDSLRSPPSGADSLCSLS RLTSVEPSCRVRTPLRLMAKGYKQKKLPGLVGSFFLLRRERDSNPR
Sequences:
>Translated_206_residues MANGCKQKKLPRLIGSFSCCGERGIDSLRSPPSGADSLCSLSRLTSVEPSCRVRTPLRLMANGCKQKKLPGLFGSFFCCG ERGIDSLRSPPSGADSLCSLSRLTSVEPSCRVRTPLRLMAKGYKQKKLPWLFGSFFCCGERGIDSLRSPPSGADSLCSLS RLTSVEPSCRVRTPLRLMAKGYKQKKLPGLVGSFFLLRRERDSNPR >Mature_205_residues ANGCKQKKLPRLIGSFSCCGERGIDSLRSPPSGADSLCSLSRLTSVEPSCRVRTPLRLMANGCKQKKLPGLFGSFFCCGE RGIDSLRSPPSGADSLCSLSRLTSVEPSCRVRTPLRLMAKGYKQKKLPWLFGSFFCCGERGIDSLRSPPSGADSLCSLSR LTSVEPSCRVRTPLRLMAKGYKQKKLPGLVGSFFLLRRERDSNPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22542; Mature: 22410
Theoretical pI: Translated: 10.69; Mature: 10.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 8.7 %Cys+Met (Translated Protein) 6.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 8.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANGCKQKKLPRLIGSFSCCGERGIDSLRSPPSGADSLCSLSRLTSVEPSCRVRTPLRLM CCCCCHHHHHHHHHHHHHHHHHHCHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHH ANGCKQKKLPGLFGSFFCCGERGIDSLRSPPSGADSLCSLSRLTSVEPSCRVRTPLRLMA HHHHHHHCCCCHHHHHHHHCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHH KGYKQKKLPWLFGSFFCCGERGIDSLRSPPSGADSLCSLSRLTSVEPSCRVRTPLRLMAK HHHHHCCCCHHHHHHHHHCHHCHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHH GYKQKKLPGLVGSFFLLRRERDSNPR HHHHHCCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure ANGCKQKKLPRLIGSFSCCGERGIDSLRSPPSGADSLCSLSRLTSVEPSCRVRTPLRLM CCCCHHHHHHHHHHHHHHHHHHCHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHH ANGCKQKKLPGLFGSFFCCGERGIDSLRSPPSGADSLCSLSRLTSVEPSCRVRTPLRLMA HHHHHHHCCCCHHHHHHHHCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHH KGYKQKKLPWLFGSFFCCGERGIDSLRSPPSGADSLCSLSRLTSVEPSCRVRTPLRLMAK HHHHHCCCCHHHHHHHHHCHHCHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHH GYKQKKLPGLVGSFFLLRRERDSNPR HHHHHCCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA