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The map label for this gene is 194334232

Identifier: 194334232

GI number: 194334232

Start: 1549838

End: 1551400

Strand: Reverse

Name: 194334232

Synonym: Paes_1424

Alternate gene names: NA

Gene position: 1551400-1549838 (Counterclockwise)

Preceding gene: 194334233

Following gene: 194334231

Centisome position: 61.74

GC content: 48.37

Gene sequence:

>1563_bases
ATGAAAATTCTGCTTATCTATCCGGAATTTCCCGATACGTTCTGGAGTTTCAAGCACGCATTGAAATTTATCGGAAAAAA
GGCTGCCCTTCCTCCTCTGGGCATGATTACCGTTGCCTCGATGCTTCCCGACAACTGGGAGCGCAGGCTTGTCGATCTTA
ACGTAAGCCCGCTTAAAATAAAAGATCTTGTATGGGCCGATATGGTGTTTGTCAGTGCGATGGCGGTTCAGCAGCGATCT
GCACGAGAGGTTATTGATCAATGCAAAAGAGCCGGTGTAAAAGTGGTTGCTGGTGGACCGTTGTTTACTTCCGATCATGA
GCAGTTTCCGAATGTCGATCATTTTGTGCTCAATGAAGCCGAGCTTACCCTTTCTCAGTTTCTCGAAGATCTGGACCGTG
GTATTTTGCAAAGAGTGTATGCCGCTGATGCGTTTGCCGATATCTCCACGACACCAGCTCCGCAGTGGAACATTCTTGAG
ATGCGGAAATATGCCTCCATGGCTATACAGTTTTCAAGGGGATGTCCCTATCACTGTGACTTTTGTAATGTCACGGCTCT
GTTCGGTCATAAAATACGAACAAAAACAAGTCAGCAGATTATCGATGAGCTTGACGGGCTCCGTGAGGCCGGGTGGAAAG
GCTCCGTCTTTTTTGTGGACGATAATTTCATAGCCCACAAGTCGTATCTGAAAAAGGAACTGCTTCCGAAACTGATCGAA
TGGCGCCGGTCCAACTCGGTGGCCAACCGCTACTATACCGAATGTTCCATCAATCTCGCTGACGACTCCGAATTGATGGA
CCTTATGGTAGCGGCTGGTTTTAACCAGGTCTTTATCGGTATCGAAACACCGGATGATCTTGCCCTTCAAGCGTGCGGTA
AGCAGCACAATACATCCAGAAACCTTCTCGATAACGTCAGGAGAATACAGCACGCAGGGCTGGAGGTTATGGGCGGGTTT
ATCGTTGGTTTCGACAGCGATACACCCTCGATTTTTTCTAAACAGATCGAGTTTATTCAGAACAGCGGCATTGTAACCGC
TATGGTCGGTCTCCTGCAGGCCCTTCCGGGCACAGGACTGTATGAACGGATGAAAAGCGAGGGGCGGTTGTTGTGTACGT
CAAGCGGCGACAATGTCGATGGCAATACGAACATTATATCGAAAATGGACCCAGAGATTTTACGCAAAGGCTACAGGACT
ATGATGGTCCATCTGTATGCGCCCAAACACTATTATCAACGTGTTATGACATTGCTTAGGGAATACCGTGTGCCGGAATT
AATAGGCGGTATTCAGTTCGATCAGTTTATGGCTTTTGCCCGATCAACGGTGCTGCTCGGTGTTCTAGGCCGGGAGCGGT
TCCATTACTGGAAAATGCTGCTATGGACGTCGTTCAACCGCCCACGCTCTTTGCCTCTCGCGGTGACTTTGGCTATCTAT
GGTCACCATTTTCGTCAGGTCTGCCGTTTGCATCTCAGGCAAGCTGAGAAGCAGGGCGTAGTATCGAGCGTAAAGGAGGA
GAATGCTATTGCTTTATGGAAGTTGAAAAAGATGAAGCCTTAA

Upstream 100 bases:

>100_bases
CGCACTCTAAGGCCGCAGAGATCCTGAAAAAGATGTTTTGTTCCTTTGAATGATGTGGTGTATATGCTGGTTTATTATAT
GAAGGAAGGGTAATATTGCA

Downstream 100 bases:

>100_bases
CCGGGCTCTGTGAAGAAGGTCTGACAGGATAATTAAAACGGAGAAGAATCATGAGTTTAAAAGAAGCCTATAAACAGAAA
GCTGAGGCCGAACTGGAACT

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: ORF N [H]

Number of amino acids: Translated: 520; Mature: 520

Protein sequence:

>520_residues
MKILLIYPEFPDTFWSFKHALKFIGKKAALPPLGMITVASMLPDNWERRLVDLNVSPLKIKDLVWADMVFVSAMAVQQRS
AREVIDQCKRAGVKVVAGGPLFTSDHEQFPNVDHFVLNEAELTLSQFLEDLDRGILQRVYAADAFADISTTPAPQWNILE
MRKYASMAIQFSRGCPYHCDFCNVTALFGHKIRTKTSQQIIDELDGLREAGWKGSVFFVDDNFIAHKSYLKKELLPKLIE
WRRSNSVANRYYTECSINLADDSELMDLMVAAGFNQVFIGIETPDDLALQACGKQHNTSRNLLDNVRRIQHAGLEVMGGF
IVGFDSDTPSIFSKQIEFIQNSGIVTAMVGLLQALPGTGLYERMKSEGRLLCTSSGDNVDGNTNIISKMDPEILRKGYRT
MMVHLYAPKHYYQRVMTLLREYRVPELIGGIQFDQFMAFARSTVLLGVLGRERFHYWKMLLWTSFNRPRSLPLAVTLAIY
GHHFRQVCRLHLRQAEKQGVVSSVKEENAIALWKLKKMKP

Sequences:

>Translated_520_residues
MKILLIYPEFPDTFWSFKHALKFIGKKAALPPLGMITVASMLPDNWERRLVDLNVSPLKIKDLVWADMVFVSAMAVQQRS
AREVIDQCKRAGVKVVAGGPLFTSDHEQFPNVDHFVLNEAELTLSQFLEDLDRGILQRVYAADAFADISTTPAPQWNILE
MRKYASMAIQFSRGCPYHCDFCNVTALFGHKIRTKTSQQIIDELDGLREAGWKGSVFFVDDNFIAHKSYLKKELLPKLIE
WRRSNSVANRYYTECSINLADDSELMDLMVAAGFNQVFIGIETPDDLALQACGKQHNTSRNLLDNVRRIQHAGLEVMGGF
IVGFDSDTPSIFSKQIEFIQNSGIVTAMVGLLQALPGTGLYERMKSEGRLLCTSSGDNVDGNTNIISKMDPEILRKGYRT
MMVHLYAPKHYYQRVMTLLREYRVPELIGGIQFDQFMAFARSTVLLGVLGRERFHYWKMLLWTSFNRPRSLPLAVTLAIY
GHHFRQVCRLHLRQAEKQGVVSSVKEENAIALWKLKKMKP
>Mature_520_residues
MKILLIYPEFPDTFWSFKHALKFIGKKAALPPLGMITVASMLPDNWERRLVDLNVSPLKIKDLVWADMVFVSAMAVQQRS
AREVIDQCKRAGVKVVAGGPLFTSDHEQFPNVDHFVLNEAELTLSQFLEDLDRGILQRVYAADAFADISTTPAPQWNILE
MRKYASMAIQFSRGCPYHCDFCNVTALFGHKIRTKTSQQIIDELDGLREAGWKGSVFFVDDNFIAHKSYLKKELLPKLIE
WRRSNSVANRYYTECSINLADDSELMDLMVAAGFNQVFIGIETPDDLALQACGKQHNTSRNLLDNVRRIQHAGLEVMGGF
IVGFDSDTPSIFSKQIEFIQNSGIVTAMVGLLQALPGTGLYERMKSEGRLLCTSSGDNVDGNTNIISKMDPEILRKGYRT
MMVHLYAPKHYYQRVMTLLREYRVPELIGGIQFDQFMAFARSTVLLGVLGRERFHYWKMLLWTSFNRPRSLPLAVTLAIY
GHHFRQVCRLHLRQAEKQGVVSSVKEENAIALWKLKKMKP

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006158
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 59171; Mature: 59171

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILLIYPEFPDTFWSFKHALKFIGKKAALPPLGMITVASMLPDNWERRLVDLNVSPLKI
CEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCEEEECCCCCEEH
KDLVWADMVFVSAMAVQQRSAREVIDQCKRAGVKVVAGGPLFTSDHEQFPNVDHFVLNEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHCCCCCCEEECHH
ELTLSQFLEDLDRGILQRVYAADAFADISTTPAPQWNILEMRKYASMAIQFSRGCPYHCD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
FCNVTALFGHKIRTKTSQQIIDELDGLREAGWKGSVFFVDDNFIAHKSYLKKELLPKLIE
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHH
WRRSNSVANRYYTECSINLADDSELMDLMVAAGFNQVFIGIETPDDLALQACGKQHNTSR
HHHCCCHHHHEEEEEEEEECCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCCCHH
NLLDNVRRIQHAGLEVMGGFIVGFDSDTPSIFSKQIEFIQNSGIVTAMVGLLQALPGTGL
HHHHHHHHHHHCCHHEECCEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCH
YERMKSEGRLLCTSSGDNVDGNTNIISKMDPEILRKGYRTMMVHLYAPKHYYQRVMTLLR
HHHHHCCCCEEEECCCCCCCCCCCCHHCCCHHHHHHHHHHEEEEEECCHHHHHHHHHHHH
EYRVPELIGGIQFDQFMAFARSTVLLGVLGRERFHYWKMLLWTSFNRPRSLPLAVTLAIY
HCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHH
GHHFRQVCRLHLRQAEKQGVVSSVKEENAIALWKLKKMKP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC
>Mature Secondary Structure
MKILLIYPEFPDTFWSFKHALKFIGKKAALPPLGMITVASMLPDNWERRLVDLNVSPLKI
CEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCEEEECCCCCEEH
KDLVWADMVFVSAMAVQQRSAREVIDQCKRAGVKVVAGGPLFTSDHEQFPNVDHFVLNEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHCCCCCCEEECHH
ELTLSQFLEDLDRGILQRVYAADAFADISTTPAPQWNILEMRKYASMAIQFSRGCPYHCD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
FCNVTALFGHKIRTKTSQQIIDELDGLREAGWKGSVFFVDDNFIAHKSYLKKELLPKLIE
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHH
WRRSNSVANRYYTECSINLADDSELMDLMVAAGFNQVFIGIETPDDLALQACGKQHNTSR
HHHCCCHHHHEEEEEEEEECCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCCCHH
NLLDNVRRIQHAGLEVMGGFIVGFDSDTPSIFSKQIEFIQNSGIVTAMVGLLQALPGTGL
HHHHHHHHHHHCCHHEECCEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCH
YERMKSEGRLLCTSSGDNVDGNTNIISKMDPEILRKGYRTMMVHLYAPKHYYQRVMTLLR
HHHHHCCCCEEEECCCCCCCCCCCCHHCCCHHHHHHHHHHEEEEEECCHHHHHHHHHHHH
EYRVPELIGGIQFDQFMAFARSTVLLGVLGRERFHYWKMLLWTSFNRPRSLPLAVTLAIY
HCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHH
GHHFRQVCRLHLRQAEKQGVVSSVKEENAIALWKLKKMKP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231; 8467083 [H]